RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A SUI2P20459 304 aaKnown RBP10.29□□□□□ -0.76
TGA1tA(UGC)A SYF1Q04048 859 aaPredicted RBP10.29□□□□□ -0.76
TGA1tA(UGC)A RPS9BP05755 195 aaKnown RBP10.28□□□□□ -0.76
TGA1tA(UGC)A ICL1P28240 557 aaPredicted RBP10.28□□□□□ -0.76
TGA1tA(UGC)A SET1P38827 1080 aaKnown RBP10.28□□□□□ -0.76
TGA1tA(UGC)A SHC1P39000 512 aa10.28□□□□□ -0.76
TGA1tA(UGC)A CST6P40535 587 aa10.28□□□□□ -0.76
TGA1tA(UGC)A FCP1Q03254 732 aa10.27□□□□□ -0.77
TGA1tA(UGC)A SAC3P46674 1301 aa10.27□□□□□ -0.77
TGA1tA(UGC)A ATG20Q07528 640 aa10.26□□□□□ -0.77
TGA1tA(UGC)A DIP2Q12220 943 aaPredicted RBP10.26□□□□□ -0.77
TGA1tA(UGC)A GRX6Q12438 231 aa10.26□□□□□ -0.77
TGA1tA(UGC)A YLR278CQ05854 1341 aa10.26□□□□□ -0.77
TGA1tA(UGC)A SSA4P22202 642 aaKnown RBP10.25□□□□□ -0.77
TGA1tA(UGC)A PUS5Q06244 254 aa10.25□□□□□ -0.77
TGA1tA(UGC)A MRP7P12687 371 aa10.24□□□□□ -0.77
TGA1tA(UGC)A FRD1P32614 470 aaKnown RBP10.24□□□□□ -0.77
TGA1tA(UGC)A YKU70P32807 602 aa10.24□□□□□ -0.77
TGA1tA(UGC)A DUR1,2P32528 1835 aaKnown RBP10.23□□□□□ -0.77
TGA1tA(UGC)A TOP1P04786 769 aa10.23□□□□□ -0.77
TGA1tA(UGC)A NUP133P36161 1157 aa10.23□□□□□ -0.77
TGA1tA(UGC)A RPN1P38764 993 aaKnown RBP10.23□□□□□ -0.77
TGA1tA(UGC)A VPS27P40343 622 aaKnown RBP10.23□□□□□ -0.77
TGA1tA(UGC)A RET1P22276 1149 aaKnown RBP10.22□□□□□ -0.77
TGA1tA(UGC)A SET4P42948 560 aa10.22□□□□□ -0.77
TGA1tA(UGC)A SAS4Q04003 481 aa10.22□□□□□ -0.77
TGA1tA(UGC)A YGR122WP53272 402 aa10.21□□□□□ -0.77
TGA1tA(UGC)A PKH1Q03407 766 aa10.21□□□□□ -0.77
TGA1tA(UGC)A PEX21P50091 288 aa10.2□□□□□ -0.78
TGA1tA(UGC)A SLI15P38283 698 aa10.19□□□□□ -0.78
TGA1tA(UGC)A ITC1P53125 1264 aa10.19□□□□□ -0.78
TGA1tA(UGC)A RAD24P32641 659 aa10.18□□□□□ -0.78
TGA1tA(UGC)A ICP55P40051 511 aa10.18□□□□□ -0.78
TGA1tA(UGC)A MTC5Q03897 1148 aa10.18□□□□□ -0.78
TGA1tA(UGC)A DPL1Q05567 589 aa10.18□□□□□ -0.78
TGA1tA(UGC)A DPH6Q12429 685 aa10.18□□□□□ -0.78
TGA1tA(UGC)A THS1P04801 734 aaKnown RBP10.17□□□□□ -0.78
TGA1tA(UGC)A NSR1P27476 414 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
TGA1tA(UGC)A KRE2P27809 442 aa10.17□□□□□ -0.78
TGA1tA(UGC)A RTG2P32608 588 aaKnown RBP10.17□□□□□ -0.78
TGA1tA(UGC)A SPL2P38839 148 aa10.17□□□□□ -0.78
TGA1tA(UGC)A CDC45Q08032 650 aa10.17□□□□□ -0.78
TGA1tA(UGC)A TRP5P00931 707 aaKnown RBP10.16□□□□□ -0.78
TGA1tA(UGC)A YPP1P46951 817 aa10.16□□□□□ -0.78
TGA1tA(UGC)A SWC3P31376 625 aa10.15□□□□□ -0.78
TGA1tA(UGC)A BOI2P39969 1040 aa10.15□□□□□ -0.78
TGA1tA(UGC)A GAP1P19145 602 aaPredicted RBP10.14□□□□□ -0.79
TGA1tA(UGC)A UBP12P39538 1254 aa10.14□□□□□ -0.79
TGA1tA(UGC)A HXT10P43581 546 aa10.14□□□□□ -0.79
TGA1tA(UGC)A GAS5Q08193 484 aa10.14□□□□□ -0.79
TGA1tA(UGC)A PSH1Q12161 406 aa10.14□□□□□ -0.79
TGA1tA(UGC)A RVB2Q12464 471 aaKnown RBP10.14□□□□□ -0.79
TGA1tA(UGC)A FLO11P08640 1367 aa10.14□□□□□ -0.79
TGA1tA(UGC)A RPS19AP07280 144 aaKnown RBP10.13□□□□□ -0.79
TGA1tA(UGC)A RPS19BP07281 144 aaPredicted RBP10.13□□□□□ -0.79
TGA1tA(UGC)A NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
TGA1tA(UGC)A UBX2Q04228 584 aa10.13□□□□□ -0.79
TGA1tA(UGC)A CSI1Q04368 295 aa10.13□□□□□ -0.79
TGA1tA(UGC)A GLC3P32775 704 aa10.12□□□□□ -0.79
TGA1tA(UGC)A FET4P40988 552 aa10.12□□□□□ -0.79
TGA1tA(UGC)A YRB30P53107 440 aaPredicted RBP10.12□□□□□ -0.79
TGA1tA(UGC)A MAK21Q12176 1025 aaKnown RBP10.12□□□□□ -0.79
TGA1tA(UGC)A MGM1P32266 881 aa10.11□□□□□ -0.79
TGA1tA(UGC)A RRD1P40454 393 aaKnown RBP10.11□□□□□ -0.79
TGA1tA(UGC)A RPT4P53549 437 aaKnown RBP10.11□□□□□ -0.79
TGA1tA(UGC)A TIM50Q02776 476 aa10.11□□□□□ -0.79
TGA1tA(UGC)A THI3Q07471 609 aa10.11□□□□□ -0.79
TGA1tA(UGC)A ADR1P07248 1323 aa10.1□□□□□ -0.79
TGA1tA(UGC)A MSM1P22438 575 aa10.1□□□□□ -0.79
TGA1tA(UGC)A YIL092WP40497 633 aa10.1□□□□□ -0.79
TGA1tA(UGC)A NGR1P32831 672 aaKnown RBP10.09□□□□□ -0.79
TGA1tA(UGC)A STV1P37296 890 aa10.09□□□□□ -0.79
TGA1tA(UGC)A LCB1P25045 558 aaKnown RBP10.07□□□□□ -0.8
TGA1tA(UGC)A PRS1P32895 427 aaKnown RBP10.07□□□□□ -0.8
TGA1tA(UGC)A YGR117CP53270 476 aa10.07□□□□□ -0.8
TGA1tA(UGC)A POM152P39685 1337 aa10.07□□□□□ -0.8
TGA1tA(UGC)A AFG2P32794 780 aa10.06□□□□□ -0.8
TGA1tA(UGC)A ETP1P38748 585 aaKnown RBP10.06□□□□□ -0.8
TGA1tA(UGC)A EMP47P43555 445 aa10.06□□□□□ -0.8
TGA1tA(UGC)A VPS4P52917 437 aa10.06□□□□□ -0.8
TGA1tA(UGC)A IRC4Q03036 179 aa10.06□□□□□ -0.8
TGA1tA(UGC)A TOS4Q06266 489 aa10.06□□□□□ -0.8
TGA1tA(UGC)A NOP8Q08287 484 aaPredicted RBP10.06□□□□□ -0.8
TGA1tA(UGC)A RRG1Q12167 365 aaPredicted RBP10.06□□□□□ -0.8
TGA1tA(UGC)A TIF4632P39936 914 aaKnown RBP10.05□□□□□ -0.8
TGA1tA(UGC)A VHR2P40041 505 aa10.05□□□□□ -0.8
TGA1tA(UGC)A TRM44Q02648 567 aaKnown RBP10.05□□□□□ -0.8
TGA1tA(UGC)A YIL089WP40500 205 aa10.04□□□□□ -0.8
TGA1tA(UGC)A GSC2P40989 1895 aa10.04□□□□□ -0.8
TGA1tA(UGC)A GCD7P32502 381 aaPredicted RBP10.03□□□□□ -0.8
TGA1tA(UGC)A ILV3P39522 585 aaKnown RBP10.03□□□□□ -0.8
TGA1tA(UGC)A UTP7P40055 554 aaKnown RBP10.03□□□□□ -0.8
TGA1tA(UGC)A SRC1Q03707 834 aa10.03□□□□□ -0.8
TGA1tA(UGC)A PRP42Q03776 544 aaKnown RBP10.03□□□□□ -0.8
TGA1tA(UGC)A CRF1Q04930 467 aa10.03□□□□□ -0.8
TGA1tA(UGC)A SUP35P05453 685 aaKnown RBP10.02□□□□□ -0.81
TGA1tA(UGC)A ARG82P07250 355 aa10.02□□□□□ -0.81
TGA1tA(UGC)A DAL5P15365 543 aa10.02□□□□□ -0.81
TGA1tA(UGC)A NUG1P40010 520 aaKnown RBP10.02□□□□□ -0.81
TGA1tA(UGC)A PEA2P40091 420 aa10.02□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms