RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W NAF1P53919 492 aaKnown RBP5.32□□□□□ -1.56
YOP1YPR028W AIM7Q12156 149 aa5.32□□□□□ -1.56
YOP1YPR028W UTR2P32623 467 aa5.31□□□□□ -1.56
YOP1YPR028W ALA1P40825 983 aaKnown RBP5.31□□□□□ -1.56
YOP1YPR028W ISR1Q06098 443 aaKnown RBP5.31□□□□□ -1.56
YOP1YPR028W KNS1P32350 737 aaPredicted RBP5.3□□□□□ -1.56
YOP1YPR028W UTP7P40055 554 aaKnown RBP5.3□□□□□ -1.56
YOP1YPR028W PDC5P16467 563 aaKnown RBP5.29□□□□□ -1.56
YOP1YPR028W IRE1P32361 1115 aa5.29□□□□□ -1.56
YOP1YPR028W TBS1P38114 1094 aa5.29□□□□□ -1.56
YOP1YPR028W MRPL16P38064 232 aa5.28□□□□□ -1.56
YOP1YPR028W IRC24P40580 263 aa5.28□□□□□ -1.56
YOP1YPR028W JJJ2P46997 583 aa5.28□□□□□ -1.56
YOP1YPR028W DMA1P38823 416 aa5.27□□□□□ -1.57
YOP1YPR028W SUM1P46676 1062 aa5.27□□□□□ -1.57
YOP1YPR028W PRY1P47032 299 aa5.27□□□□□ -1.57
YOP1YPR028W ALO1P54783 526 aaKnown RBP5.27□□□□□ -1.57
YOP1YPR028W YPL034WQ03083 165 aa5.27□□□□□ -1.57
YOP1YPR028W MRX12P47084 519 aa5.26□□□□□ -1.57
YOP1YPR028W SHM1P37292 490 aaPredicted RBP5.25□□□□□ -1.57
YOP1YPR028W STB3Q12427 513 aa5.25□□□□□ -1.57
YOP1YPR028W APL6P46682 809 aa5.24□□□□□ -1.57
YOP1YPR028W OMA1P36163 345 aa5.23□□□□□ -1.57
YOP1YPR028W EMP47P43555 445 aa5.23□□□□□ -1.57
YOP1YPR028W TY1A-DR2Q03964 440 aaKnown RBP5.23□□□□□ -1.57
YOP1YPR028W PSH1Q12161 406 aa5.23□□□□□ -1.57
YOP1YPR028W SSA2P10592 639 aaKnown RBP5.22□□□□□ -1.57
YOP1YPR028W PDC6P26263 563 aaKnown RBP5.22□□□□□ -1.57
YOP1YPR028W SPR3P41901 512 aa5.22□□□□□ -1.57
YOP1YPR028W HAL5P38970 855 aaKnown RBP5.21□□□□□ -1.58
YOP1YPR028W INP52P50942 1183 aa5.21□□□□□ -1.58
YOP1YPR028W ISF1P32488 338 aa5.2□□□□□ -1.58
YOP1YPR028W SLX8P40072 274 aa5.2□□□□□ -1.58
YOP1YPR028W TPS3P38426 1054 aaKnown RBP5.19□□□□□ -1.58
YOP1YPR028W MCM16Q12262 181 aa5.17□□□□□ -1.58
YOP1YPR028W RPP1AP05318 106 aaPredicted RBP5.16□□□□□ -1.58
YOP1YPR028W RPS31P05759 152 aaKnown RBP5.16□□□□□ -1.58
YOP1YPR028W CSE4P36012 229 aa5.15□□□□□ -1.59
YOP1YPR028W MSC7P38694 644 aa5.15□□□□□ -1.59
YOP1YPR028W HDA3Q06623 655 aa5.15□□□□□ -1.59
YOP1YPR028W BUD9P53226 547 aa5.14□□□□□ -1.59
YOP1YPR028W NHA1Q99271 985 aa5.14□□□□□ -1.59
YOP1YPR028W LEU1P07264 779 aaKnown RBP5.13□□□□□ -1.59
YOP1YPR028W SOH1P38633 127 aa5.13□□□□□ -1.59
YOP1YPR028W SPT5P27692 1063 aaKnown RBP5.12□□□□□ -1.59
YOP1YPR028W AVT1P47082 602 aa5.12□□□□□ -1.59
YOP1YPR028W HPC2Q01448 625 aa5.12□□□□□ -1.59
YOP1YPR028W UTP13Q05946 817 aaKnown RBP5.12□□□□□ -1.59
YOP1YPR028W PGM2P37012 569 aaKnown RBP5.11□□□□□ -1.59
YOP1YPR028W ALG14P38242 237 aa5.11□□□□□ -1.59
YOP1YPR028W ATG3P40344 310 aa5.11□□□□□ -1.59
YOP1YPR028W RGP1P16664 663 aa5.1□□□□□ -1.59
YOP1YPR028W YPQ2Q06328 317 aa5.1□□□□□ -1.59
YOP1YPR028W ALD2P47771 506 aa5.09□□□□□ -1.59
YOP1YPR028W YDJ1P25491 409 aaKnown RBP5.08□□□□□ -1.6
YOP1YPR028W AI3P03877 415 aa5.07□□□□□ -1.6
YOP1YPR028W PGM1P33401 570 aaKnown RBP5.07□□□□□ -1.6
YOP1YPR028W TFB3Q03290 321 aa5.07□□□□□ -1.6
YOP1YPR028W SWI5P08153 709 aa5.06□□□□□ -1.6
YOP1YPR028W YTA6P40328 754 aa5.06□□□□□ -1.6
YOP1YPR028W HEH2Q03281 663 aa5.06□□□□□ -1.6
YOP1YPR028W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
YOP1YPR028W SAC7P17121 654 aa5.05□□□□□ -1.6
YOP1YPR028W YNL165WP53891 406 aa5.05□□□□□ -1.6
YOP1YPR028W YBL036CP38197 257 aa5.04□□□□□ -1.6
YOP1YPR028W MED7Q08278 222 aa5.04□□□□□ -1.6
YOP1YPR028W NAR1P23503 491 aaKnown RBP5.03□□□□□ -1.6
YOP1YPR028W PRK1P40494 810 aa5.03□□□□□ -1.6
YOP1YPR028W YPP1P46951 817 aa5.03□□□□□ -1.6
YOP1YPR028W ARI1P53111 347 aaKnown RBP5.03□□□□□ -1.6
YOP1YPR028W GIS4Q04233 774 aa5.03□□□□□ -1.6
YOP1YPR028W GAS5Q08193 484 aa5.03□□□□□ -1.6
YOP1YPR028W KIN1P13185 1064 aa5.02□□□□□ -1.61
YOP1YPR028W NAB2P32505 525 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
YOP1YPR028W TRP3P00937 484 aa5.01□□□□□ -1.61
YOP1YPR028W MCM1P11746 286 aa5.01□□□□□ -1.61
YOP1YPR028W COQ2P32378 372 aa5.01□□□□□ -1.61
YOP1YPR028W YKR073CP36153 106 aa5.01□□□□□ -1.61
YOP1YPR028W RRM3P38766 723 aa5.01□□□□□ -1.61
YOP1YPR028W AOS1Q06624 347 aa5.01□□□□□ -1.61
YOP1YPR028W MLF3P32047 452 aa5□□□□□ -1.61
YOP1YPR028W LIP5P32875 414 aa5□□□□□ -1.61
YOP1YPR028W KAE1P36132 386 aa5□□□□□ -1.61
YOP1YPR028W AIM9P40053 627 aaKnown RBP5□□□□□ -1.61
YOP1YPR028W RPS6AP0CX37 236 aaKnown RBP4.99□□□□□ -1.61
YOP1YPR028W RPS6BP0CX38 236 aaPredicted RBP4.99□□□□□ -1.61
YOP1YPR028W SFA1P32771 386 aa4.99□□□□□ -1.61
YOP1YPR028W Q0182Q9ZZW1 134 aa4.98□□□□□ -1.61
YOP1YPR028W ELM1P32801 640 aa4.97□□□□□ -1.61
YOP1YPR028W NCL1P38205 684 aaKnown RBP4.97□□□□□ -1.61
YOP1YPR028W GUA1P38625 525 aaKnown RBP4.97□□□□□ -1.61
YOP1YPR028W YLR122CQ12312 125 aa4.97□□□□□ -1.61
YOP1YPR028W TOS1P38288 455 aa4.96□□□□□ -1.62
YOP1YPR028W YFL034WP43564 1073 aa4.96□□□□□ -1.62
YOP1YPR028W PUB1P32588 453 aaKnown RBP RIP-Chip data4.95□□□□□ -1.62not detected
YOP1YPR028W NTH2P35172 780 aa4.95□□□□□ -1.62
YOP1YPR028W MTO1P53070 669 aa4.95□□□□□ -1.62
YOP1YPR028W CTH1P47976 325 aa4.94□□□□□ -1.62
YOP1YPR028W SKP1P52286 194 aa4.94□□□□□ -1.62
YOP1YPR028W SUP45P12385 437 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms