RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	MTC5	Q03897	1148 aa		6.07	□□□□□ -1.44
CAF20	YOR276W	SSA4	P22202	642 aa	Known RBP	6.06	□□□□□ -1.44
CAF20	YOR276W	SLX8	P40072	274 aa		6.06	□□□□□ -1.44
CAF20	YOR276W	UBP15	P50101	1230 aa		6.06	□□□□□ -1.44
CAF20	YOR276W	CUZ1	P53899	274 aa		6.06	□□□□□ -1.44
CAF20	YOR276W	ENO2	P00925	437 aa	Known RBP	6.05	□□□□□ -1.44
CAF20	YOR276W	CPS1	P27614	576 aa		6.05	□□□□□ -1.44
CAF20	YOR276W	TBS1	P38114	1094 aa		6.05	□□□□□ -1.44
CAF20	YOR276W	SOH1	P38633	127 aa		6.05	□□□□□ -1.44
CAF20	YOR276W	YNL108C	P53929	270 aa		6.05	□□□□□ -1.44
CAF20	YOR276W	TY1A-DR3	Q12441	440 aa		6.05	□□□□□ -1.44
CAF20	YOR276W	RTG2	P32608	588 aa	Known RBP	6.04	□□□□□ -1.44
CAF20	YOR276W	RIM21	P48565	533 aa		6.03	□□□□□ -1.44
CAF20	YOR276W	HDA3	Q06623	655 aa		6.03	□□□□□ -1.44
CAF20	YOR276W	AHP1	P38013	176 aa	Known RBP	6.02	□□□□□ -1.45
CAF20	YOR276W	ICP55	P40051	511 aa		6.02	□□□□□ -1.45
CAF20	YOR276W	SUM1	P46676	1062 aa		6.02	□□□□□ -1.45
CAF20	YOR276W	DIT1	P21623	536 aa		6.01	□□□□□ -1.45
CAF20	YOR276W	CEM1	P39525	442 aa		6.01	□□□□□ -1.45
CAF20	YOR276W	UTP7	P40055	554 aa	Known RBP	6.01	□□□□□ -1.45
CAF20	YOR276W	NOP8	Q08287	484 aa	Predicted RBP	6.01	□□□□□ -1.45
CAF20	YOR276W	TTI1	P36097	1038 aa		6	□□□□□ -1.45
CAF20	YOR276W	RDS2	P19541	446 aa	Known RBP	5.99	□□□□□ -1.45
CAF20	YOR276W	JJJ2	P46997	583 aa		5.99	□□□□□ -1.45
CAF20	YOR276W	SYT1	Q06836	1226 aa		5.99	□□□□□ -1.45
CAF20	YOR276W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
CAF20	YOR276W	YMR265C	Q03508	461 aa	Known RBP	5.98	□□□□□ -1.45
CAF20	YOR276W	PUS1	Q12211	544 aa	Known RBP	5.98	□□□□□ -1.45
CAF20	YOR276W	PHM7	Q12252	991 aa		5.98	□□□□□ -1.45
CAF20	YOR276W	YDR461C-A	Q2V2P7	80 aa		5.98	□□□□□ -1.45
CAF20	YOR276W	MDJ1	P35191	511 aa		5.97	□□□□□ -1.45
CAF20	YOR276W	ALA1	P40825	983 aa	Known RBP	5.97	□□□□□ -1.45
CAF20	YOR276W	RPL34A	P87262	121 aa	Predicted RBP	5.97	□□□□□ -1.45
CAF20	YOR276W	NOB1	Q08444	459 aa	Known RBP	5.97	□□□□□ -1.45
CAF20	YOR276W	KRE33	P53914	1056 aa	Known RBP	5.96	□□□□□ -1.46
CAF20	YOR276W	MRX10	Q05648	414 aa		5.96	□□□□□ -1.46
CAF20	YOR276W	AI1	P03875	834 aa		5.95	□□□□□ -1.46
CAF20	YOR276W	IRE1	P32361	1115 aa		5.95	□□□□□ -1.46
CAF20	YOR276W	SHM1	P37292	490 aa	Predicted RBP	5.95	□□□□□ -1.46
CAF20	YOR276W	YFL066C	P43538	392 aa		5.95	□□□□□ -1.46
CAF20	YOR276W	YPQ2	Q06328	317 aa		5.95	□□□□□ -1.46
CAF20	YOR276W	ENO1	P00924	437 aa	Known RBP	5.94	□□□□□ -1.46
CAF20	YOR276W	SWI5	P08153	709 aa		5.94	□□□□□ -1.46
CAF20	YOR276W	AIM9	P40053	627 aa	Known RBP	5.94	□□□□□ -1.46
CAF20	YOR276W	NSG2	P53898	299 aa		5.94	□□□□□ -1.46
CAF20	YOR276W	ADE12	P80210	433 aa	Known RBP	5.94	□□□□□ -1.46
CAF20	YOR276W	YML083C	Q04526	418 aa		5.94	□□□□□ -1.46
CAF20	YOR276W	YFL034W	P43564	1073 aa		5.92	□□□□□ -1.46
CAF20	YOR276W	THI72	Q08579	599 aa		5.92	□□□□□ -1.46
CAF20	YOR276W	PSH1	Q12161	406 aa		5.92	□□□□□ -1.46
CAF20	YOR276W	RPS6A	P0CX37	236 aa	Known RBP	5.91	□□□□□ -1.46
CAF20	YOR276W	RPS6B	P0CX38	236 aa	Predicted RBP	5.91	□□□□□ -1.46
CAF20	YOR276W	PUP1	P25043	261 aa		5.91	□□□□□ -1.46
CAF20	YOR276W	PDC6	P26263	563 aa	Known RBP	5.91	□□□□□ -1.46
CAF20	YOR276W	CDC3	P32457	520 aa	Known RBP	5.9	□□□□□ -1.46
CAF20	YOR276W	LSB3	P43603	459 aa	Known RBP	5.9	□□□□□ -1.46
CAF20	YOR276W	RPS31	P05759	152 aa	Known RBP	5.89	□□□□□ -1.47
CAF20	YOR276W	MCM1	P11746	286 aa		5.89	□□□□□ -1.47
CAF20	YOR276W	PEP12	P32854	288 aa		5.89	□□□□□ -1.47
CAF20	YOR276W	FPS1	P23900	669 aa		5.88	□□□□□ -1.47
CAF20	YOR276W	NTH2	P35172	780 aa		5.88	□□□□□ -1.47
CAF20	YOR276W	SIS2	P36024	562 aa		5.88	□□□□□ -1.47
CAF20	YOR276W	MRPL16	P38064	232 aa		5.88	□□□□□ -1.47
CAF20	YOR276W	TSC13	Q99190	310 aa		5.88	□□□□□ -1.47
CAF20	YOR276W	SLD2	P34252	453 aa		5.87	□□□□□ -1.47
CAF20	YOR276W	TGL4	P36165	910 aa		5.87	□□□□□ -1.47
CAF20	YOR276W	GPM1	P00950	247 aa	Known RBP	5.86	□□□□□ -1.47
CAF20	YOR276W	LEU1	P07264	779 aa	Known RBP	5.86	□□□□□ -1.47
CAF20	YOR276W	PDI1	P17967	522 aa	Known RBP	5.86	□□□□□ -1.47
CAF20	YOR276W	STB3	Q12427	513 aa		5.86	□□□□□ -1.47
CAF20	YOR276W	KTR7	P40504	517 aa		5.85	□□□□□ -1.47
CAF20	YOR276W	SPR3	P41901	512 aa		5.85	□□□□□ -1.47
CAF20	YOR276W	YNL165W	P53891	406 aa		5.85	□□□□□ -1.47
CAF20	YOR276W	HAT1	Q12341	374 aa		5.85	□□□□□ -1.47
CAF20	YOR276W	SSF1	P38789	453 aa	Predicted RBP	5.84	□□□□□ -1.47
CAF20	YOR276W	SBE2	P42223	864 aa	Known RBP	5.84	□□□□□ -1.47
CAF20	YOR276W	ALD2	P47771	506 aa		5.84	□□□□□ -1.47
CAF20	YOR276W	CCT8	P47079	568 aa	Known RBP	5.83	□□□□□ -1.48
CAF20	YOR276W	ECM23	Q02710	187 aa		5.83	□□□□□ -1.48
CAF20	YOR276W	TDA6	Q06466	467 aa		5.83	□□□□□ -1.48
CAF20	YOR276W	YPR053C	Q6Q5F3	151 aa		5.83	□□□□□ -1.48
CAF20	YOR276W	CYT1	P07143	309 aa		5.82	□□□□□ -1.48
CAF20	YOR276W	RGP1	P16664	663 aa		5.81	□□□□□ -1.48
CAF20	YOR276W	MLF3	P32047	452 aa		5.81	□□□□□ -1.48
CAF20	YOR276W	KNS1	P32350	737 aa	Predicted RBP	5.81	□□□□□ -1.48
CAF20	YOR276W	YTA6	P40328	754 aa		5.81	□□□□□ -1.48
CAF20	YOR276W	ACS2	P52910	683 aa	Known RBP	5.81	□□□□□ -1.48
CAF20	YOR276W	TY1A-DR2	Q03964	440 aa	Known RBP	5.81	□□□□□ -1.48
CAF20	YOR276W	RPP1A	P05318	106 aa	Predicted RBP	5.8	□□□□□ -1.48
CAF20	YOR276W	PDC5	P16467	563 aa	Known RBP	5.8	□□□□□ -1.48
CAF20	YOR276W	PHO87	P25360	923 aa		5.8	□□□□□ -1.48
CAF20	YOR276W	MCX1	P38323	520 aa	Predicted RBP	5.8	□□□□□ -1.48
CAF20	YOR276W	SKN7	P38889	622 aa		5.8	□□□□□ -1.48
CAF20	YOR276W	YNR014W	P53719	212 aa		5.8	□□□□□ -1.48
CAF20	YOR276W	Q0182	Q9ZZW1	134 aa		5.8	□□□□□ -1.48
CAF20	YOR276W	UBP1	P25037	809 aa		5.79	□□□□□ -1.48
CAF20	YOR276W	MSC7	P38694	644 aa		5.79	□□□□□ -1.48
CAF20	YOR276W	SEN54	Q02825	467 aa	Predicted RBP	5.79	□□□□□ -1.48
CAF20	YOR276W	YMR187C	Q03236	431 aa		5.79	□□□□□ -1.48
CAF20	YOR276W	HAP4	P14064	554 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms