RNA–Protein interactions for RNA: YOR167C

RPS28A, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS28A, Length 204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS28AYOR167C MSM1P22438 575 aa7.97□□□□□ -1.13
RPS28AYOR167C TIM50Q02776 476 aa7.97□□□□□ -1.13
RPS28AYOR167C SAS4Q04003 481 aa7.97□□□□□ -1.13
RPS28AYOR167C SSK22P25390 1331 aaPredicted RBP7.97□□□□□ -1.13
RPS28AYOR167C FRD1P32614 470 aaKnown RBP7.96□□□□□ -1.14
RPS28AYOR167C GLC3P32775 704 aa7.96□□□□□ -1.14
RPS28AYOR167C APL2P36000 726 aaPredicted RBP7.96□□□□□ -1.14
RPS28AYOR167C AIM7Q12156 149 aa7.96□□□□□ -1.14
RPS28AYOR167C LYS2P07702 1392 aa7.96□□□□□ -1.14
RPS28AYOR167C EBP2P36049 427 aaKnown RBP7.95□□□□□ -1.14
RPS28AYOR167C SYF1Q04048 859 aaPredicted RBP7.95□□□□□ -1.14
RPS28AYOR167C DPL1Q05567 589 aa7.95□□□□□ -1.14
RPS28AYOR167C YPR204WQ08995 1032 aa7.95□□□□□ -1.14
RPS28AYOR167C HAT1Q12341 374 aa7.95□□□□□ -1.14
RPS28AYOR167C RRP46P53256 223 aaPredicted RBP7.94□□□□□ -1.14
RPS28AYOR167C NSE3Q05541 303 aa7.94□□□□□ -1.14
RPS28AYOR167C PEA2P40091 420 aa7.93□□□□□ -1.14
RPS28AYOR167C TRM44Q02648 567 aaKnown RBP7.93□□□□□ -1.14
RPS28AYOR167C SDH2P21801 266 aa7.92□□□□□ -1.14
RPS28AYOR167C TFA1P36100 482 aa7.92□□□□□ -1.14
RPS28AYOR167C SET4P42948 560 aa7.92□□□□□ -1.14
RPS28AYOR167C EMP47P43555 445 aa7.92□□□□□ -1.14
RPS28AYOR167C VPS4P52917 437 aa7.92□□□□□ -1.14
RPS28AYOR167C YNL050CP53952 270 aa7.92□□□□□ -1.14
RPS28AYOR167C VPS64Q03944 604 aa7.92□□□□□ -1.14
RPS28AYOR167C TYW1Q08960 810 aaKnown RBP7.91□□□□□ -1.14
RPS28AYOR167C STV1P37296 890 aa7.9□□□□□ -1.14
RPS28AYOR167C YGR117CP53270 476 aa7.9□□□□□ -1.14
RPS28AYOR167C ZDS2P54786 942 aa7.9□□□□□ -1.14
RPS28AYOR167C SRF1Q12516 437 aa7.9□□□□□ -1.14
RPS28AYOR167C TIF6Q12522 245 aaKnown RBP7.9□□□□□ -1.14
RPS28AYOR167C HPR1P17629 752 aaKnown RBP7.89□□□□□ -1.15
RPS28AYOR167C CWC15Q03772 175 aaKnown RBP7.89□□□□□ -1.15
RPS28AYOR167C TIF4632P39936 914 aaKnown RBP7.88□□□□□ -1.15
RPS28AYOR167C TSR3Q12094 313 aaKnown RBP7.88□□□□□ -1.15
RPS28AYOR167C COQ4O13525 335 aa7.86□□□□□ -1.15
RPS28AYOR167C AFG2P32794 780 aa7.86□□□□□ -1.15
RPS28AYOR167C PKH1Q03407 766 aa7.86□□□□□ -1.15
RPS28AYOR167C YLR271WQ06152 274 aa7.86□□□□□ -1.15
RPS28AYOR167C GAS5Q08193 484 aa7.86□□□□□ -1.15
RPS28AYOR167C RRG1Q12167 365 aaPredicted RBP7.86□□□□□ -1.15
RPS28AYOR167C HVG1P0CE11 249 aa7.85□□□□□ -1.15
RPS28AYOR167C BSD2P38356 321 aa7.85□□□□□ -1.15
RPS28AYOR167C ZDS1P50111 915 aaKnown RBP7.85□□□□□ -1.15
RPS28AYOR167C CRF1Q04930 467 aa7.85□□□□□ -1.15
RPS28AYOR167C BMS1Q08965 1183 aaKnown RBP7.85□□□□□ -1.15
RPS28AYOR167C FLO11P08640 1367 aa7.84□□□□□ -1.15
RPS28AYOR167C TRP5P00931 707 aaKnown RBP7.84□□□□□ -1.15
RPS28AYOR167C KRE2P27809 442 aa7.84□□□□□ -1.15
RPS28AYOR167C MAC1P35192 417 aa7.84□□□□□ -1.15
RPS28AYOR167C MAM1P40065 302 aa7.84□□□□□ -1.15
RPS28AYOR167C RTR1P40084 226 aaPredicted RBP7.84□□□□□ -1.15
RPS28AYOR167C FCP1Q03254 732 aa7.84□□□□□ -1.15
RPS28AYOR167C DPH6Q12429 685 aa7.84□□□□□ -1.15
RPS28AYOR167C CSR2Q12734 1121 aa7.84□□□□□ -1.15
RPS28AYOR167C PRD1P25375 712 aa7.83□□□□□ -1.16
RPS28AYOR167C YBR287WP38355 427 aa7.83□□□□□ -1.16
RPS28AYOR167C UBX2Q04228 584 aa7.83□□□□□ -1.16
RPS28AYOR167C NCS6P53088 359 aa7.82□□□□□ -1.16
RPS28AYOR167C PIB1Q06651 286 aa7.82□□□□□ -1.16
RPS28AYOR167C SWI1P09547 1314 aa7.81□□□□□ -1.16
RPS28AYOR167C PRS1P32895 427 aaKnown RBP7.81□□□□□ -1.16
RPS28AYOR167C PNT1P38969 423 aa7.81□□□□□ -1.16
RPS28AYOR167C ICP55P40051 511 aa7.81□□□□□ -1.16
RPS28AYOR167C RPT4P53549 437 aaKnown RBP7.81□□□□□ -1.16
RPS28AYOR167C SEN54Q02825 467 aaPredicted RBP7.81□□□□□ -1.16
RPS28AYOR167C CST9Q06032 482 aa7.81□□□□□ -1.16
RPS28AYOR167C YOL057WQ08225 711 aa7.81□□□□□ -1.16
RPS28AYOR167C PCS60P38137 543 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
RPS28AYOR167C RRT6P53117 311 aaPredicted RBP7.8□□□□□ -1.16
RPS28AYOR167C DNM1P54861 757 aa7.8□□□□□ -1.16
RPS28AYOR167C CBP1P07252 654 aa7.79□□□□□ -1.16
RPS28AYOR167C SPL2P38839 148 aa7.79□□□□□ -1.16
RPS28AYOR167C GSM1P42950 618 aa7.79□□□□□ -1.16
RPS28AYOR167C MOT2P34909 587 aaKnown RBP7.78□□□□□ -1.16
RPS28AYOR167C PAM1P37304 830 aaKnown RBP7.78□□□□□ -1.16
RPS28AYOR167C CST6P40535 587 aa7.78□□□□□ -1.16
RPS28AYOR167C PSD2P53037 1138 aaKnown RBP7.78□□□□□ -1.16
RPS28AYOR167C THI22Q06490 572 aa7.78□□□□□ -1.16
RPS28AYOR167C YPR148CQ06523 435 aa7.78□□□□□ -1.16
RPS28AYOR167C SAC3P46674 1301 aa7.78□□□□□ -1.16
RPS28AYOR167C APE3P37302 537 aaKnown RBP7.77□□□□□ -1.17
RPS28AYOR167C GYP7P48365 746 aa7.77□□□□□ -1.17
RPS28AYOR167C THI3Q07471 609 aa7.77□□□□□ -1.17
RPS28AYOR167C RTT109Q07794 436 aa7.77□□□□□ -1.17
RPS28AYOR167C GSC2P40989 1895 aa7.77□□□□□ -1.17
RPS28AYOR167C MGM1P32266 881 aa7.76□□□□□ -1.17
RPS28AYOR167C NGR1P32831 672 aaKnown RBP7.76□□□□□ -1.17
RPS28AYOR167C NUP133P36161 1157 aa7.76□□□□□ -1.17
RPS28AYOR167C RSC30P38781 883 aa7.76□□□□□ -1.17
RPS28AYOR167C YJR008WP47085 338 aa7.76□□□□□ -1.17
RPS28AYOR167C PRP42Q03776 544 aaKnown RBP7.76□□□□□ -1.17
RPS28AYOR167C YDR306CQ06640 478 aa7.76□□□□□ -1.17
RPS28AYOR167C UTP7P40055 554 aaKnown RBP7.75□□□□□ -1.17
RPS28AYOR167C TOS4Q06266 489 aa7.75□□□□□ -1.17
RPS28AYOR167C RPS7AP26786 190 aaKnown RBP7.74□□□□□ -1.17
RPS28AYOR167C ITC1P53125 1264 aa7.74□□□□□ -1.17
RPS28AYOR167C IOC4Q04213 475 aa7.74□□□□□ -1.17
RPS28AYOR167C ARG82P07250 355 aa7.73□□□□□ -1.17
RPS28AYOR167C SET1P38827 1080 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 148.4 ms