RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeast

Gene SFM1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFM1	YOR021C	TFB3	Q03290	321 aa		5.77	□□□□□ -1.49
SFM1	YOR021C	SPT5	P27692	1063 aa	Known RBP	5.76	□□□□□ -1.49
SFM1	YOR021C	AHP1	P38013	176 aa	Known RBP	5.76	□□□□□ -1.49
SFM1	YOR021C	SOH1	P38633	127 aa		5.76	□□□□□ -1.49
SFM1	YOR021C	SHM1	P37292	490 aa	Predicted RBP	5.75	□□□□□ -1.49
SFM1	YOR021C	RPN1	P38764	993 aa	Known RBP	5.75	□□□□□ -1.49
SFM1	YOR021C	SLX8	P40072	274 aa		5.75	□□□□□ -1.49
SFM1	YOR021C	YDR461C-A	Q2V2P7	80 aa		5.75	□□□□□ -1.49
SFM1	YOR021C	TBS1	P38114	1094 aa		5.74	□□□□□ -1.49
SFM1	YOR021C	SUM1	P46676	1062 aa		5.74	□□□□□ -1.49
SFM1	YOR021C	JJJ2	P46997	583 aa		5.74	□□□□□ -1.49
SFM1	YOR021C	HPC2	Q01448	625 aa		5.74	□□□□□ -1.49
SFM1	YOR021C	TDA6	Q06466	467 aa		5.74	□□□□□ -1.49
SFM1	YOR021C	HDA3	Q06623	655 aa		5.74	□□□□□ -1.49
SFM1	YOR021C	ALA1	P40825	983 aa	Known RBP	5.73	□□□□□ -1.49
SFM1	YOR021C	YPR053C	Q6Q5F3	151 aa		5.73	□□□□□ -1.49
SFM1	YOR021C	YNL108C	P53929	270 aa		5.72	□□□□□ -1.49
SFM1	YOR021C	ENO2	P00925	437 aa	Known RBP	5.71	□□□□□ -1.5
SFM1	YOR021C	IRE1	P32361	1115 aa		5.71	□□□□□ -1.5
SFM1	YOR021C	BRL1	P38770	471 aa		5.71	□□□□□ -1.5
SFM1	YOR021C	PSH1	Q12161	406 aa		5.7	□□□□□ -1.5
SFM1	YOR021C	SUP45	P12385	437 aa	Known RBP	5.69	□□□□□ -1.5
SFM1	YOR021C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
SFM1	YOR021C	GPM1	P00950	247 aa	Known RBP	5.68	□□□□□ -1.5
SFM1	YOR021C	PDC6	P26263	563 aa	Known RBP	5.68	□□□□□ -1.5
SFM1	YOR021C	SKN7	P38889	622 aa		5.68	□□□□□ -1.5
SFM1	YOR021C	UTP13	Q05946	817 aa	Known RBP	5.68	□□□□□ -1.5
SFM1	YOR021C	RPS31	P05759	152 aa	Known RBP	5.67	□□□□□ -1.5
SFM1	YOR021C	RDS2	P19541	446 aa	Known RBP	5.67	□□□□□ -1.5
SFM1	YOR021C	MRPL16	P38064	232 aa		5.67	□□□□□ -1.5
SFM1	YOR021C	YNR014W	P53719	212 aa		5.67	□□□□□ -1.5
SFM1	YOR021C	YMR187C	Q03236	431 aa		5.67	□□□□□ -1.5
SFM1	YOR021C	FPS1	P23900	669 aa		5.66	□□□□□ -1.5
SFM1	YOR021C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
SFM1	YOR021C	SWI5	P08153	709 aa		5.65	□□□□□ -1.5
SFM1	YOR021C	YCK2	P23292	546 aa	Known RBP	5.65	□□□□□ -1.5
SFM1	YOR021C	ATG3	P40344	310 aa		5.65	□□□□□ -1.5
SFM1	YOR021C	YPP1	P46951	817 aa		5.65	□□□□□ -1.5
SFM1	YOR021C	RIM21	P48565	533 aa		5.65	□□□□□ -1.5
SFM1	YOR021C	DMA2	P53924	522 aa		5.65	□□□□□ -1.5
SFM1	YOR021C	YPQ2	Q06328	317 aa		5.65	□□□□□ -1.5
SFM1	YOR021C	STB3	Q12427	513 aa		5.65	□□□□□ -1.5
SFM1	YOR021C	TAF7	Q05021	590 aa		5.64	□□□□□ -1.51
SFM1	YOR021C	MCX1	P38323	520 aa	Predicted RBP	5.63	□□□□□ -1.51
SFM1	YOR021C	SLN1	P39928	1220 aa	Predicted RBP	5.63	□□□□□ -1.51
SFM1	YOR021C	YNL165W	P53891	406 aa		5.63	□□□□□ -1.51
SFM1	YOR021C	BOI2	P39969	1040 aa		5.62	□□□□□ -1.51
SFM1	YOR021C	AIM9	P40053	627 aa	Known RBP	5.62	□□□□□ -1.51
SFM1	YOR021C	SPR3	P41901	512 aa		5.61	□□□□□ -1.51
SFM1	YOR021C	YJL007C	P47080	104 aa		5.61	□□□□□ -1.51
SFM1	YOR021C	ALD2	P47771	506 aa		5.61	□□□□□ -1.51
SFM1	YOR021C	TY1A-DR2	Q03964	440 aa	Known RBP	5.61	□□□□□ -1.51
SFM1	YOR021C	YDR215C	Q12240	137 aa		5.61	□□□□□ -1.51
SFM1	YOR021C	SBP1	P10080	294 aa	Known RBP	5.6	□□□□□ -1.51
SFM1	YOR021C	PDC5	P16467	563 aa	Known RBP	5.6	□□□□□ -1.51
SFM1	YOR021C	MCA1	Q08601	432 aa		5.6	□□□□□ -1.51
SFM1	YOR021C	LEU1	P07264	779 aa	Known RBP	5.58	□□□□□ -1.52
SFM1	YOR021C	RPS6A	P0CX37	236 aa	Known RBP	5.58	□□□□□ -1.52
SFM1	YOR021C	RPS6B	P0CX38	236 aa	Predicted RBP	5.58	□□□□□ -1.52
SFM1	YOR021C	MSC7	P38694	644 aa		5.58	□□□□□ -1.52
SFM1	YOR021C	KNS1	P32350	737 aa	Predicted RBP	5.57	□□□□□ -1.52
SFM1	YOR021C	AMN1	P38285	549 aa	Predicted RBP	5.57	□□□□□ -1.52
SFM1	YOR021C	ENO1	P00924	437 aa	Known RBP	5.56	□□□□□ -1.52
SFM1	YOR021C	PDI1	P17967	522 aa	Known RBP	5.56	□□□□□ -1.52
SFM1	YOR021C	NTH2	P35172	780 aa		5.56	□□□□□ -1.52
SFM1	YOR021C	MRX10	Q05648	414 aa		5.56	□□□□□ -1.52
SFM1	YOR021C	MLF3	P32047	452 aa		5.55	□□□□□ -1.52
SFM1	YOR021C	ATG32	P40458	529 aa		5.54	□□□□□ -1.52
SFM1	YOR021C	PRY1	P47032	299 aa		5.54	□□□□□ -1.52
SFM1	YOR021C	RGP1	P16664	663 aa		5.53	□□□□□ -1.52
SFM1	YOR021C	BIM1	P40013	344 aa		5.53	□□□□□ -1.52
SFM1	YOR021C	Q0182	Q9ZZW1	134 aa		5.53	□□□□□ -1.52
SFM1	YOR021C	MCM1	P11746	286 aa		5.52	□□□□□ -1.53
SFM1	YOR021C	MET1	P36150	593 aa		5.52	□□□□□ -1.53
SFM1	YOR021C	TIF1	P10081	395 aa	Known RBP	5.51	□□□□□ -1.53
SFM1	YOR021C	LSB6	P42951	607 aa		5.51	□□□□□ -1.53
SFM1	YOR021C	YFL034W	P43564	1073 aa		5.51	□□□□□ -1.53
SFM1	YOR021C	TAT1	P38085	619 aa		5.5	□□□□□ -1.53
SFM1	YOR021C	YTA6	P40328	754 aa		5.5	□□□□□ -1.53
SFM1	YOR021C	TSC13	Q99190	310 aa		5.5	□□□□□ -1.53
SFM1	YOR021C	RTG2	P32608	588 aa	Known RBP	5.49	□□□□□ -1.53
SFM1	YOR021C	PEP12	P32854	288 aa		5.49	□□□□□ -1.53
SFM1	YOR021C	KTR7	P40504	517 aa		5.48	□□□□□ -1.53
SFM1	YOR021C	CYT1	P07143	309 aa		5.47	□□□□□ -1.53
SFM1	YOR021C	PRK1	P40494	810 aa		5.47	□□□□□ -1.53
SFM1	YOR021C	MTO1	P53070	669 aa		5.47	□□□□□ -1.53
SFM1	YOR021C	GLT1	Q12680	2145 aa	Known RBP	5.47	□□□□□ -1.53
SFM1	YOR021C	PGM2	P37012	569 aa	Known RBP	5.46	□□□□□ -1.54
SFM1	YOR021C	ACS2	P52910	683 aa	Known RBP	5.46	□□□□□ -1.54
SFM1	YOR021C	ALG14	P38242	237 aa		5.45	□□□□□ -1.54
SFM1	YOR021C	YPL034W	Q03083	165 aa		5.45	□□□□□ -1.54
SFM1	YOR021C	NAR1	P23503	491 aa	Known RBP	5.43	□□□□□ -1.54
SFM1	YOR021C	YNR040W	P53736	256 aa		5.43	□□□□□ -1.54
SFM1	YOR021C	TPS3	P38426	1054 aa	Known RBP	5.42	□□□□□ -1.54
SFM1	YOR021C	RPL34B	P40525	121 aa	Known RBP	5.42	□□□□□ -1.54
SFM1	YOR021C	BUD9	P53226	547 aa		5.42	□□□□□ -1.54
SFM1	YOR021C	ALO1	P54783	526 aa	Known RBP	5.42	□□□□□ -1.54
SFM1	YOR021C	CUS1	Q02554	436 aa	Predicted RBP	5.42	□□□□□ -1.54
SFM1	YOR021C	GAS5	Q08193	484 aa		5.42	□□□□□ -1.54
SFM1	YOR021C	NHA1	Q99271	985 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms