RNA–Protein interactions for RNA: YOR016C

ERP4, Transcript of Member of the p24 family involved in ER to Golgi transport, yeast

Gene ERP4, Length 624 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERP4	YOR016C	ATG3	P40344	310 aa		5.09	□□□□□ -1.59
ERP4	YOR016C	SBE2	P42223	864 aa	Known RBP	5.09	□□□□□ -1.59
ERP4	YOR016C	TY1A-DR3	Q12441	440 aa		5.09	□□□□□ -1.59
ERP4	YOR016C	ATG32	P40458	529 aa		5.08	□□□□□ -1.6
ERP4	YOR016C	AI1	P03875	834 aa		5.07	□□□□□ -1.6
ERP4	YOR016C	SUP45	P12385	437 aa	Known RBP	5.07	□□□□□ -1.6
ERP4	YOR016C	DAT1	P13483	248 aa	Known RBP	5.07	□□□□□ -1.6
ERP4	YOR016C	UTR2	P32623	467 aa		5.07	□□□□□ -1.6
ERP4	YOR016C	TIF1	P10081	395 aa	Known RBP	5.06	□□□□□ -1.6
ERP4	YOR016C	RTG2	P32608	588 aa	Known RBP	5.06	□□□□□ -1.6
ERP4	YOR016C	MSN5	P52918	1224 aa		5.06	□□□□□ -1.6
ERP4	YOR016C	DMA2	P53924	522 aa		5.06	□□□□□ -1.6
ERP4	YOR016C	TBS1	P38114	1094 aa		5.05	□□□□□ -1.6
ERP4	YOR016C	RIM21	P48565	533 aa		5.05	□□□□□ -1.6
ERP4	YOR016C	YPR053C	Q6Q5F3	151 aa		5.05	□□□□□ -1.6
ERP4	YOR016C	UTP7	P40055	554 aa	Known RBP	5.04	□□□□□ -1.6
ERP4	YOR016C	SLX8	P40072	274 aa		5.04	□□□□□ -1.6
ERP4	YOR016C	UBP15	P50101	1230 aa		5.04	□□□□□ -1.6
ERP4	YOR016C	TDA6	Q06466	467 aa		5.04	□□□□□ -1.6
ERP4	YOR016C	ENO1	P00924	437 aa	Known RBP	5.03	□□□□□ -1.6
ERP4	YOR016C	UTP13	Q05946	817 aa	Known RBP	5.03	□□□□□ -1.6
ERP4	YOR016C	HDA3	Q06623	655 aa		5.03	□□□□□ -1.6
ERP4	YOR016C	RDS2	P19541	446 aa	Known RBP	5.02	□□□□□ -1.61
ERP4	YOR016C	SUM1	P46676	1062 aa		5.02	□□□□□ -1.61
ERP4	YOR016C	SBP1	P10080	294 aa	Known RBP	5.01	□□□□□ -1.61
ERP4	YOR016C	DIT1	P21623	536 aa		5.01	□□□□□ -1.61
ERP4	YOR016C	CEM1	P39525	442 aa		5.01	□□□□□ -1.61
ERP4	YOR016C	SYT1	Q06836	1226 aa		5.01	□□□□□ -1.61
ERP4	YOR016C	SHM1	P37292	490 aa	Predicted RBP	5	□□□□□ -1.61
ERP4	YOR016C	YMR265C	Q03508	461 aa	Known RBP	5	□□□□□ -1.61
ERP4	YOR016C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
ERP4	YOR016C	AHP1	P38013	176 aa	Known RBP	4.99	□□□□□ -1.61
ERP4	YOR016C	KTR7	P40504	517 aa		4.99	□□□□□ -1.61
ERP4	YOR016C	ALA1	P40825	983 aa	Known RBP	4.99	□□□□□ -1.61
ERP4	YOR016C	JJJ2	P46997	583 aa		4.99	□□□□□ -1.61
ERP4	YOR016C	GLT1	Q12680	2145 aa	Known RBP	4.99	□□□□□ -1.61
ERP4	YOR016C	KRE33	P53914	1056 aa	Known RBP	4.98	□□□□□ -1.61
ERP4	YOR016C	MRX10	Q05648	414 aa		4.98	□□□□□ -1.61
ERP4	YOR016C	YDR461C-A	Q2V2P7	80 aa		4.98	□□□□□ -1.61
ERP4	YOR016C	IRE1	P32361	1115 aa		4.97	□□□□□ -1.61
ERP4	YOR016C	SKN7	P38889	622 aa		4.97	□□□□□ -1.61
ERP4	YOR016C	AIM9	P40053	627 aa	Known RBP	4.97	□□□□□ -1.61
ERP4	YOR016C	ADE12	P80210	433 aa	Known RBP	4.97	□□□□□ -1.61
ERP4	YOR016C	YPQ2	Q06328	317 aa		4.97	□□□□□ -1.61
ERP4	YOR016C	SWI5	P08153	709 aa		4.96	□□□□□ -1.62
ERP4	YOR016C	YMR187C	Q03236	431 aa		4.96	□□□□□ -1.62
ERP4	YOR016C	PSH1	Q12161	406 aa		4.96	□□□□□ -1.62
ERP4	YOR016C	RPS31	P05759	152 aa	Known RBP	4.95	□□□□□ -1.62
ERP4	YOR016C	YCK2	P23292	546 aa	Known RBP	4.95	□□□□□ -1.62
ERP4	YOR016C	YFL034W	P43564	1073 aa		4.95	□□□□□ -1.62
ERP4	YOR016C	PDI1	P17967	522 aa	Known RBP	4.94	□□□□□ -1.62
ERP4	YOR016C	PDC6	P26263	563 aa	Known RBP	4.94	□□□□□ -1.62
ERP4	YOR016C	RPS6A	P0CX37	236 aa	Known RBP	4.93	□□□□□ -1.62
ERP4	YOR016C	RPS6B	P0CX38	236 aa	Predicted RBP	4.93	□□□□□ -1.62
ERP4	YOR016C	MCA1	Q08601	432 aa		4.93	□□□□□ -1.62
ERP4	YOR016C	NTH2	P35172	780 aa		4.92	□□□□□ -1.62
ERP4	YOR016C	SIS2	P36024	562 aa		4.92	□□□□□ -1.62
ERP4	YOR016C	SLN1	P39928	1220 aa	Predicted RBP	4.92	□□□□□ -1.62
ERP4	YOR016C	YNL165W	P53891	406 aa		4.92	□□□□□ -1.62
ERP4	YOR016C	PEP12	P32854	288 aa		4.91	□□□□□ -1.62
ERP4	YOR016C	MRPL16	P38064	232 aa		4.91	□□□□□ -1.62
ERP4	YOR016C	YNR014W	P53719	212 aa		4.91	□□□□□ -1.62
ERP4	YOR016C	GPM1	P00950	247 aa	Known RBP	4.9	□□□□□ -1.63
ERP4	YOR016C	ALD2	P47771	506 aa		4.9	□□□□□ -1.63
ERP4	YOR016C	TSC13	Q99190	310 aa		4.9	□□□□□ -1.63
ERP4	YOR016C	CYT1	P07143	309 aa		4.89	□□□□□ -1.63
ERP4	YOR016C	LEU1	P07264	779 aa	Known RBP	4.89	□□□□□ -1.63
ERP4	YOR016C	FPS1	P23900	669 aa		4.89	□□□□□ -1.63
ERP4	YOR016C	PHO87	P25360	923 aa		4.89	□□□□□ -1.63
ERP4	YOR016C	SPR3	P41901	512 aa		4.89	□□□□□ -1.63
ERP4	YOR016C	YDR215C	Q12240	137 aa		4.89	□□□□□ -1.63
ERP4	YOR016C	STB3	Q12427	513 aa		4.89	□□□□□ -1.63
ERP4	YOR016C	CPS1	P27614	576 aa		4.88	□□□□□ -1.63
ERP4	YOR016C	ACS2	P52910	683 aa	Known RBP	4.88	□□□□□ -1.63
ERP4	YOR016C	MCM1	P11746	286 aa		4.87	□□□□□ -1.63
ERP4	YOR016C	HAP4	P14064	554 aa		4.87	□□□□□ -1.63
ERP4	YOR016C	AMN1	P38285	549 aa	Predicted RBP	4.87	□□□□□ -1.63
ERP4	YOR016C	ECM23	Q02710	187 aa		4.87	□□□□□ -1.63
ERP4	YOR016C	TGL4	P36165	910 aa		4.86	□□□□□ -1.63
ERP4	YOR016C	MSC7	P38694	644 aa		4.86	□□□□□ -1.63
ERP4	YOR016C	YTA6	P40328	754 aa		4.86	□□□□□ -1.63
ERP4	YOR016C	TY1A-DR2	Q03964	440 aa	Known RBP	4.86	□□□□□ -1.63
ERP4	YOR016C	GAS4	Q08271	471 aa		4.86	□□□□□ -1.63
ERP4	YOR016C	GAL2	P13181	574 aa		4.85	□□□□□ -1.63
ERP4	YOR016C	MLF3	P32047	452 aa		4.85	□□□□□ -1.63
ERP4	YOR016C	TTI1	P36097	1038 aa		4.85	□□□□□ -1.63
ERP4	YOR016C	MCX1	P38323	520 aa	Predicted RBP	4.85	□□□□□ -1.63
ERP4	YOR016C	PDC5	P16467	563 aa	Known RBP	4.84	□□□□□ -1.63
ERP4	YOR016C	RGP1	P16664	663 aa		4.84	□□□□□ -1.63
ERP4	YOR016C	Q0182	Q9ZZW1	134 aa		4.84	□□□□□ -1.63
ERP4	YOR016C	KNS1	P32350	737 aa	Predicted RBP	4.83	□□□□□ -1.64
ERP4	YOR016C	UBX7	P38349	436 aa		4.83	□□□□□ -1.64
ERP4	YOR016C	BOI2	P39969	1040 aa		4.83	□□□□□ -1.64
ERP4	YOR016C	ROM1	P53046	1155 aa		4.82	□□□□□ -1.64
ERP4	YOR016C	VAN1	P23642	535 aa		4.81	□□□□□ -1.64
ERP4	YOR016C	PRY1	P47032	299 aa		4.81	□□□□□ -1.64
ERP4	YOR016C	SSA4	P22202	642 aa	Known RBP	4.8	□□□□□ -1.64
ERP4	YOR016C	UBP1	P25037	809 aa		4.8	□□□□□ -1.64
ERP4	YOR016C	MTO1	P53070	669 aa		4.8	□□□□□ -1.64
ERP4	YOR016C	HXT5	P38695	592 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms