RNA–Protein interactions for RNA: YOL071W

SDH5, Transcript of Protein required for flavinylation of Sdh1p, yeast

Gene SDH5, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH5	YOL071W	FAS2	P19097	1887 aa	Known RBP	12.2	□□□□□ -0.46
SDH5	YOL071W	SAC3	P46674	1301 aa		12.19	□□□□□ -0.46
SDH5	YOL071W	SET1	P38827	1080 aa	Known RBP	12.19	□□□□□ -0.46
SDH5	YOL071W	FIG2	P25653	1609 aa		12.19	□□□□□ -0.46
SDH5	YOL071W	VPS27	P40343	622 aa	Known RBP	12.18	□□□□□ -0.46
SDH5	YOL071W	YBR287W	P38355	427 aa		12.17	□□□□□ -0.46
SDH5	YOL071W	YKU70	P32807	602 aa		12.16	□□□□□ -0.46
SDH5	YOL071W	MRP7	P12687	371 aa		12.15	□□□□□ -0.46
SDH5	YOL071W	SAS4	Q04003	481 aa		12.15	□□□□□ -0.46
SDH5	YOL071W	ATG20	Q07528	640 aa		12.15	□□□□□ -0.46
SDH5	YOL071W	PEX21	P50091	288 aa		12.14	□□□□□ -0.47
SDH5	YOL071W	YRB30	P53107	440 aa	Predicted RBP	12.14	□□□□□ -0.47
SDH5	YOL071W	PKH1	Q03407	766 aa		12.14	□□□□□ -0.47
SDH5	YOL071W	CDC45	Q08032	650 aa		12.14	□□□□□ -0.47
SDH5	YOL071W	ICL1	P28240	557 aa	Predicted RBP	12.13	□□□□□ -0.47
SDH5	YOL071W	SUI2	P20459	304 aa	Known RBP	12.12	□□□□□ -0.47
SDH5	YOL071W	FRD1	P32614	470 aa	Known RBP	12.12	□□□□□ -0.47
SDH5	YOL071W	RPN1	P38764	993 aa	Known RBP	12.12	□□□□□ -0.47
SDH5	YOL071W	NUP133	P36161	1157 aa		12.11	□□□□□ -0.47
SDH5	YOL071W	MTC5	Q03897	1148 aa		12.11	□□□□□ -0.47
SDH5	YOL071W	UBX2	Q04228	584 aa		12.11	□□□□□ -0.47
SDH5	YOL071W	MAK21	Q12176	1025 aa	Known RBP	12.11	□□□□□ -0.47
SDH5	YOL071W	DUR1,2	P32528	1835 aa	Known RBP	12.1	□□□□□ -0.47
SDH5	YOL071W	DIP2	Q12220	943 aa	Predicted RBP	12.1	□□□□□ -0.47
SDH5	YOL071W	DPH6	Q12429	685 aa		12.1	□□□□□ -0.47
SDH5	YOL071W	YLR278C	Q05854	1341 aa		12.1	□□□□□ -0.47
SDH5	YOL071W	TOP1	P04786	769 aa		12.09	□□□□□ -0.47
SDH5	YOL071W	CAF20	P12962	161 aa	Known RBP	12.09	□□□□□ -0.47
SDH5	YOL071W	SSA4	P22202	642 aa	Known RBP	12.09	□□□□□ -0.47
SDH5	YOL071W	RET1	P22276	1149 aa	Known RBP	12.09	□□□□□ -0.47
SDH5	YOL071W	PUS5	Q06244	254 aa		12.09	□□□□□ -0.47
SDH5	YOL071W	SLI15	P38283	698 aa		12.08	□□□□□ -0.48
SDH5	YOL071W	RTG2	P32608	588 aa	Known RBP	12.07	□□□□□ -0.48
SDH5	YOL071W	ITC1	P53125	1264 aa		12.07	□□□□□ -0.48
SDH5	YOL071W	FCP1	Q03254	732 aa		12.07	□□□□□ -0.48
SDH5	YOL071W	DPL1	Q05567	589 aa		12.07	□□□□□ -0.48
SDH5	YOL071W	SUP35	P05453	685 aa	Known RBP	12.06	□□□□□ -0.48
SDH5	YOL071W	YPP1	P46951	817 aa		12.06	□□□□□ -0.48
SDH5	YOL071W	ICP55	P40051	511 aa		12.05	□□□□□ -0.48
SDH5	YOL071W	MSM1	P22438	575 aa		12.04	□□□□□ -0.48
SDH5	YOL071W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.04	□□□□□ -0.48	not detected
SDH5	YOL071W	KRE2	P27809	442 aa		12.04	□□□□□ -0.48
SDH5	YOL071W	TIF4632	P39936	914 aa	Known RBP	12.04	□□□□□ -0.48
SDH5	YOL071W	PSH1	Q12161	406 aa		12.04	□□□□□ -0.48
SDH5	YOL071W	RPS19A	P07280	144 aa	Known RBP	12.03	□□□□□ -0.48
SDH5	YOL071W	RPS19B	P07281	144 aa	Predicted RBP	12.03	□□□□□ -0.48
SDH5	YOL071W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	12.03	□□□□□ -0.48	not detected
SDH5	YOL071W	NOP8	Q08287	484 aa	Predicted RBP	12.03	□□□□□ -0.48
SDH5	YOL071W	THS1	P04801	734 aa	Known RBP	12.02	□□□□□ -0.49
SDH5	YOL071W	UBP12	P39538	1254 aa		12.02	□□□□□ -0.49
SDH5	YOL071W	TRP5	P00931	707 aa	Known RBP	12.01	□□□□□ -0.49
SDH5	YOL071W	GLC3	P32775	704 aa		12.01	□□□□□ -0.49
SDH5	YOL071W	BOI2	P39969	1040 aa		12.01	□□□□□ -0.49
SDH5	YOL071W	TIM50	Q02776	476 aa		12	□□□□□ -0.49
SDH5	YOL071W	RAD24	P32641	659 aa		11.99	□□□□□ -0.49
SDH5	YOL071W	RVB2	Q12464	471 aa	Known RBP	11.99	□□□□□ -0.49
SDH5	YOL071W	ADR1	P07248	1323 aa		11.98	□□□□□ -0.49
SDH5	YOL071W	NUG1	P40010	520 aa	Known RBP	11.98	□□□□□ -0.49
SDH5	YOL071W	YGR122W	P53272	402 aa		11.98	□□□□□ -0.49
SDH5	YOL071W	CRF1	Q04930	467 aa		11.98	□□□□□ -0.49
SDH5	YOL071W	MGM1	P32266	881 aa		11.97	□□□□□ -0.49
SDH5	YOL071W	SPL2	P38839	148 aa		11.97	□□□□□ -0.49
SDH5	YOL071W	SET4	P42948	560 aa		11.97	□□□□□ -0.49
SDH5	YOL071W	HGH1	P48362	394 aa	Known RBP	11.97	□□□□□ -0.49
SDH5	YOL071W	PSF3	Q12146	194 aa		11.97	□□□□□ -0.49
SDH5	YOL071W	CSI1	Q04368	295 aa		11.96	□□□□□ -0.49
SDH5	YOL071W	THI3	Q07471	609 aa		11.96	□□□□□ -0.49
SDH5	YOL071W	RRG1	Q12167	365 aa	Predicted RBP	11.96	□□□□□ -0.49
SDH5	YOL071W	FET4	P40988	552 aa		11.95	□□□□□ -0.5
SDH5	YOL071W	RPT4	P53549	437 aa	Known RBP	11.95	□□□□□ -0.5
SDH5	YOL071W	SWC3	P31376	625 aa		11.94	□□□□□ -0.5
SDH5	YOL071W	NGR1	P32831	672 aa	Known RBP	11.94	□□□□□ -0.5
SDH5	YOL071W	YIL092W	P40497	633 aa		11.94	□□□□□ -0.5
SDH5	YOL071W	YGR117C	P53270	476 aa		11.94	□□□□□ -0.5
SDH5	YOL071W	SNU66	Q12420	587 aa	Predicted RBP	11.94	□□□□□ -0.5
SDH5	YOL071W	RRD1	P40454	393 aa	Known RBP	11.93	□□□□□ -0.5
SDH5	YOL071W	SRC1	Q03707	834 aa		11.93	□□□□□ -0.5
SDH5	YOL071W	TYW1	Q08960	810 aa	Known RBP	11.93	□□□□□ -0.5
SDH5	YOL071W	POM152	P39685	1337 aa		11.92	□□□□□ -0.5
SDH5	YOL071W	EMP47	P43555	445 aa		11.92	□□□□□ -0.5
SDH5	YOL071W	PRP42	Q03776	544 aa	Known RBP	11.92	□□□□□ -0.5
SDH5	YOL071W	SSF1	P38789	453 aa	Predicted RBP	11.91	□□□□□ -0.5
SDH5	YOL071W	PEA2	P40091	420 aa		11.91	□□□□□ -0.5
SDH5	YOL071W	GAS5	Q08193	484 aa		11.91	□□□□□ -0.5
SDH5	YOL071W	AFG2	P32794	780 aa		11.9	□□□□□ -0.5
SDH5	YOL071W	VHR2	P40041	505 aa		11.9	□□□□□ -0.5
SDH5	YOL071W	TRM44	Q02648	567 aa	Known RBP	11.9	□□□□□ -0.5
SDH5	YOL071W	ACK1	Q07622	623 aa	Predicted RBP	11.9	□□□□□ -0.5
SDH5	YOL071W	GSC2	P40989	1895 aa		11.89	□□□□□ -0.51
SDH5	YOL071W	PRS1	P32895	427 aa	Known RBP	11.89	□□□□□ -0.51
SDH5	YOL071W	RAD2	P07276	1031 aa		11.88	□□□□□ -0.51
SDH5	YOL071W	GAP1	P19145	602 aa	Predicted RBP	11.88	□□□□□ -0.51
SDH5	YOL071W	LCB1	P25045	558 aa	Known RBP	11.88	□□□□□ -0.51
SDH5	YOL071W	GCD7	P32502	381 aa	Predicted RBP	11.88	□□□□□ -0.51
SDH5	YOL071W	IRC4	Q03036	179 aa		11.88	□□□□□ -0.51
SDH5	YOL071W	FLO11	P08640	1367 aa		11.88	□□□□□ -0.51
SDH5	YOL071W	ARG82	P07250	355 aa		11.87	□□□□□ -0.51
SDH5	YOL071W	ETP1	P38748	585 aa	Known RBP	11.87	□□□□□ -0.51
SDH5	YOL071W	HXT10	P43581	546 aa		11.87	□□□□□ -0.51
SDH5	YOL071W	WRS1	Q12109	432 aa	Known RBP	11.87	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms