RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C TY4B-JP47024 1803 aa2.63□□□□□ -1.99
SFB2YNL049C YLR419WQ06698 1435 aaKnown RBP2.63□□□□□ -1.99
SFB2YNL049C RPP1BP10622 106 aaKnown RBP2.63□□□□□ -1.99
SFB2YNL049C CPS1P27614 576 aa2.63□□□□□ -1.99
SFB2YNL049C GEF1P37020 779 aa2.63□□□□□ -1.99
SFB2YNL049C RPL34BP40525 121 aaKnown RBP2.63□□□□□ -1.99
SFB2YNL049C YML020WQ03722 664 aa2.63□□□□□ -1.99
SFB2YNL049C PEX21P50091 288 aa2.62□□□□□ -1.99
SFB2YNL049C RTG2P32608 588 aaKnown RBP2.62□□□□□ -1.99
SFB2YNL049C TTI1P36097 1038 aa2.62□□□□□ -1.99
SFB2YNL049C GYP1Q08484 637 aa2.62□□□□□ -1.99
SFB2YNL049C YRF1-3P0CX14 1859 aa2.62□□□□□ -1.99
SFB2YNL049C YRF1-7P0CX15 1859 aa2.62□□□□□ -1.99
SFB2YNL049C YRF1-6P53819 1859 aa2.62□□□□□ -1.99
SFB2YNL049C ARG8P18544 423 aa2.61□□□□□ -1.99
SFB2YNL049C SSA4P22202 642 aaKnown RBP2.61□□□□□ -1.99
SFB2YNL049C RSC30P38781 883 aa2.61□□□□□ -1.99
SFB2YNL049C IMH1Q06704 911 aaKnown RBP2.61□□□□□ -1.99
SFB2YNL049C MPC54Q08550 464 aa2.61□□□□□ -1.99
SFB2YNL049C YRR1Q12172 810 aa2.61□□□□□ -1.99
SFB2YNL049C YPR015CQ12531 247 aa2.61□□□□□ -1.99
SFB2YNL049C SUP45P12385 437 aaKnown RBP2.61□□□□□ -1.99
SFB2YNL049C CSE4P36012 229 aa2.61□□□□□ -1.99
SFB2YNL049C DPL1Q05567 589 aa2.61□□□□□ -1.99
SFB2YNL049C SLY41P22215 453 aa2.6□□□□□ -1.99
SFB2YNL049C YDJ1P25491 409 aaKnown RBP2.6□□□□□ -1.99
SFB2YNL049C SLX8P40072 274 aa2.6□□□□□ -1.99
SFB2YNL049C NMA111P53920 997 aa2.6□□□□□ -1.99
SFB2YNL049C NOP8Q08287 484 aaPredicted RBP2.6□□□□□ -1.99
SFB2YNL049C NOB1Q08444 459 aaKnown RBP2.6□□□□□ -1.99
SFB2YNL049C RAV1P47104 1357 aa2.6□□□□□ -1.99
SFB2YNL049C ENO2P00925 437 aaKnown RBP2.6□□□□□ -1.99
SFB2YNL049C UGA2P38067 497 aa2.6□□□□□ -1.99
SFB2YNL049C YNR029CP53729 429 aaKnown RBP2.6□□□□□ -1.99
SFB2YNL049C ERF2Q06551 359 aa2.6□□□□□ -1.99
SFB2YNL049C ENO1P00924 437 aaKnown RBP2.59□□□□□ -1.99
SFB2YNL049C YNL115CP53925 644 aa2.59□□□□□ -1.99
SFB2YNL049C ENV9Q08651 330 aa2.59□□□□□ -1.99
SFB2YNL049C POM152P39685 1337 aa2.59□□□□□ -1.99
SFB2YNL049C MAK16P10962 306 aaPredicted RBP2.59□□□□□ -1.99
SFB2YNL049C KEX2P13134 814 aa2.59□□□□□ -1.99
SFB2YNL049C BRE2P43132 505 aa2.59□□□□□ -1.99
SFB2YNL049C YML083CQ04526 418 aa2.59□□□□□ -1.99
SFB2YNL049C ISU2Q12056 156 aa2.59□□□□□ -1.99
SFB2YNL049C RIM15P43565 1770 aa2.59□□□□□ -2
SFB2YNL049C TRM1P15565 570 aaKnown RBP2.58□□□□□ -2
SFB2YNL049C MRX10Q05648 414 aa2.58□□□□□ -2
SFB2YNL049C LAM6Q08001 693 aa2.58□□□□□ -2
SFB2YNL049C APC1P53886 1748 aa2.58□□□□□ -2
SFB2YNL049C PUP1P25043 261 aa2.58□□□□□ -2
SFB2YNL049C SPT5P27692 1063 aaKnown RBP2.58□□□□□ -2
SFB2YNL049C NUD1P32336 851 aa2.58□□□□□ -2
SFB2YNL049C ALD2P47771 506 aa2.58□□□□□ -2
SFB2YNL049C RIM21P48565 533 aa2.58□□□□□ -2
SFB2YNL049C RTF1P53064 558 aa2.58□□□□□ -2
SFB2YNL049C PDR1P12383 1068 aa2.57□□□□□ -2
SFB2YNL049C SDH2P21801 266 aa2.57□□□□□ -2
SFB2YNL049C GCR2Q01722 534 aa2.57□□□□□ -2
SFB2YNL049C ADE6P38972 1358 aaKnown RBP2.57□□□□□ -2
SFB2YNL049C RAD9P14737 1309 aa2.57□□□□□ -2
SFB2YNL049C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SFB2YNL049C PUS6P53294 404 aa2.56□□□□□ -2
SFB2YNL049C RDS2P19541 446 aaKnown RBP2.56□□□□□ -2
SFB2YNL049C STR2P47164 639 aa2.56□□□□□ -2
SFB2YNL049C ISM1P48526 1002 aa2.56□□□□□ -2
SFB2YNL049C RPL34AP87262 121 aaPredicted RBP2.56□□□□□ -2
SFB2YNL049C BUD21Q08492 214 aaPredicted RBP2.56□□□□□ -2
SFB2YNL049C YEL077CQ3E7X8 1277 aa2.56□□□□□ -2
SFB2YNL049C SCT1P32784 759 aa2.55□□□□□ -2
SFB2YNL049C PEP12P32854 288 aa2.55□□□□□ -2
SFB2YNL049C TGL4P36165 910 aa2.55□□□□□ -2
SFB2YNL049C RAM1P22007 431 aa2.55□□□□□ -2
SFB2YNL049C ISF1P32488 338 aa2.55□□□□□ -2
SFB2YNL049C AGE1Q04412 482 aa2.55□□□□□ -2
SFB2YNL049C MCM16Q12262 181 aa2.55□□□□□ -2
SFB2YNL049C ENT1Q12518 454 aa2.55□□□□□ -2
SFB2YNL049C TY1A-DR4O74302 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-HP0C2I4 478 aaKnown RBP2.55□□□□□ -2
SFB2YNL049C TY1A-AP0CX57 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-PR1P0CX58 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-ORP0CX59 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-PR2P0CX60 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-DR5P0CX65 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-ER2P0CX66 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-GR3P0CX67 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-LR1P0CX68 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-MR2P0CX69 440 aa2.55□□□□□ -2
SFB2YNL049C CDC3P32457 520 aaKnown RBP2.55□□□□□ -2
SFB2YNL049C SIS2P36024 562 aa2.55□□□□□ -2
SFB2YNL049C YBL086CP38177 466 aa2.55□□□□□ -2
SFB2YNL049C MRX12P47084 519 aa2.55□□□□□ -2
SFB2YNL049C TY1A-JR2P47099 440 aa2.55□□□□□ -2
SFB2YNL049C NAF1P53919 492 aaKnown RBP2.55□□□□□ -2
SFB2YNL049C TY1A-DR1Q03856 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-ML1Q04706 440 aaKnown RBP2.55□□□□□ -2
SFB2YNL049C TY1A-BRQ12217 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-NL2Q12470 440 aa2.55□□□□□ -2
SFB2YNL049C TY1A-GR2Q12485 440 aa2.55□□□□□ -2
SFB2YNL049C PSK1P31374 1356 aa2.54□□□□□ -2
SFB2YNL049C RTC1Q08281 1341 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms