RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W CEM1P39525 442 aa8.53□□□□□ -1.04
CSI1YMR025W SUM1P46676 1062 aa8.53□□□□□ -1.04
CSI1YMR025W ICP55P40051 511 aa8.52□□□□□ -1.05
CSI1YMR025W YMR265CQ03508 461 aaKnown RBP8.51□□□□□ -1.05
CSI1YMR025W RDS2P19541 446 aaKnown RBP8.5□□□□□ -1.05
CSI1YMR025W DIT1P21623 536 aa8.5□□□□□ -1.05
CSI1YMR025W MDJ1P35191 511 aa8.5□□□□□ -1.05
CSI1YMR025W ALA1P40825 983 aaKnown RBP8.5□□□□□ -1.05
CSI1YMR025W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
CSI1YMR025W JJJ2P46997 583 aa8.48□□□□□ -1.05
CSI1YMR025W KRE33P53914 1056 aaKnown RBP8.47□□□□□ -1.05
CSI1YMR025W SYT1Q06836 1226 aa8.47□□□□□ -1.05
CSI1YMR025W PUS1Q12211 544 aaKnown RBP8.47□□□□□ -1.05
CSI1YMR025W BIM1P40013 344 aa8.46□□□□□ -1.06
CSI1YMR025W PHM7Q12252 991 aa8.46□□□□□ -1.06
CSI1YMR025W SHM1P37292 490 aaPredicted RBP8.45□□□□□ -1.06
CSI1YMR025W NSG2P53898 299 aa8.45□□□□□ -1.06
CSI1YMR025W ADE12P80210 433 aaKnown RBP8.45□□□□□ -1.06
CSI1YMR025W IRE1P32361 1115 aa8.44□□□□□ -1.06
CSI1YMR025W YDR461C-AQ2V2P7 80 aa8.44□□□□□ -1.06
CSI1YMR025W AI1P03875 834 aa8.43□□□□□ -1.06
CSI1YMR025W ATG32P40458 529 aa8.43□□□□□ -1.06
CSI1YMR025W MRX10Q05648 414 aa8.43□□□□□ -1.06
CSI1YMR025W THI72Q08579 599 aa8.43□□□□□ -1.06
CSI1YMR025W ENO1P00924 437 aaKnown RBP8.42□□□□□ -1.06
CSI1YMR025W SWI5P08153 709 aa8.42□□□□□ -1.06
CSI1YMR025W AIM9P40053 627 aaKnown RBP8.42□□□□□ -1.06
CSI1YMR025W TIF1P10081 395 aaKnown RBP8.41□□□□□ -1.06
CSI1YMR025W YFL066CP43538 392 aa8.41□□□□□ -1.06
CSI1YMR025W YPQ2Q06328 317 aa8.41□□□□□ -1.06
CSI1YMR025W RTG2P32608 588 aaKnown RBP8.39□□□□□ -1.07
CSI1YMR025W HGH1P48362 394 aaKnown RBP8.39□□□□□ -1.07
CSI1YMR025W PSH1Q12161 406 aa8.39□□□□□ -1.07
CSI1YMR025W PDC6P26263 563 aaKnown RBP8.38□□□□□ -1.07
CSI1YMR025W LSB3P43603 459 aaKnown RBP8.38□□□□□ -1.07
CSI1YMR025W RPS6AP0CX37 236 aaKnown RBP8.37□□□□□ -1.07
CSI1YMR025W RPS6BP0CX38 236 aaPredicted RBP8.37□□□□□ -1.07
CSI1YMR025W RPL34BP40525 121 aaKnown RBP8.37□□□□□ -1.07
CSI1YMR025W YFL034WP43564 1073 aa8.37□□□□□ -1.07
CSI1YMR025W RPS31P05759 152 aaKnown RBP8.36□□□□□ -1.07
CSI1YMR025W NTH2P35172 780 aa8.35□□□□□ -1.07
CSI1YMR025W MRPL16P38064 232 aa8.35□□□□□ -1.07
CSI1YMR025W PDI1P17967 522 aaKnown RBP8.34□□□□□ -1.07
CSI1YMR025W FPS1P23900 669 aa8.34□□□□□ -1.07
CSI1YMR025W SBE2P42223 864 aaKnown RBP8.33□□□□□ -1.08
CSI1YMR025W STB3Q12427 513 aa8.33□□□□□ -1.08
CSI1YMR025W PEP12P32854 288 aa8.32□□□□□ -1.08
CSI1YMR025W TSC13Q99190 310 aa8.32□□□□□ -1.08
CSI1YMR025W YNL165WP53891 406 aa8.31□□□□□ -1.08
CSI1YMR025W GPM1P00950 247 aaKnown RBP8.3□□□□□ -1.08
CSI1YMR025W MCM1P11746 286 aa8.3□□□□□ -1.08
CSI1YMR025W LEU1P07264 779 aaKnown RBP8.28□□□□□ -1.08
CSI1YMR025W SPR3P41901 512 aa8.28□□□□□ -1.08
CSI1YMR025W TDA6Q06466 467 aa8.28□□□□□ -1.08
CSI1YMR025W YPR053CQ6Q5F3 151 aa8.28□□□□□ -1.08
CSI1YMR025W ALD2P47771 506 aa8.27□□□□□ -1.09
CSI1YMR025W KTR7P40504 517 aa8.26□□□□□ -1.09
CSI1YMR025W CYT1P07143 309 aa8.25□□□□□ -1.09
CSI1YMR025W YTA6P40328 754 aa8.25□□□□□ -1.09
CSI1YMR025W CCT8P47079 568 aaKnown RBP8.25□□□□□ -1.09
CSI1YMR025W YNR014WP53719 212 aa8.25□□□□□ -1.09
CSI1YMR025W MLF3P32047 452 aa8.24□□□□□ -1.09
CSI1YMR025W Q0182Q9ZZW1 134 aa8.24□□□□□ -1.09
CSI1YMR025W ACS2P52910 683 aaKnown RBP8.23□□□□□ -1.09
CSI1YMR025W TY1A-DR2Q03964 440 aaKnown RBP8.23□□□□□ -1.09
CSI1YMR025W RGP1P16664 663 aa8.22□□□□□ -1.09
CSI1YMR025W LEO1P38439 464 aa8.22□□□□□ -1.09
CSI1YMR025W YMR187CQ03236 431 aa8.22□□□□□ -1.09
CSI1YMR025W PDC5P16467 563 aaKnown RBP8.21□□□□□ -1.1
CSI1YMR025W PHO87P25360 923 aa8.21□□□□□ -1.1
CSI1YMR025W SKN7P38889 622 aa8.21□□□□□ -1.1
CSI1YMR025W KNS1P32350 737 aaPredicted RBP8.2□□□□□ -1.1
CSI1YMR025W MCX1P38323 520 aaPredicted RBP8.19□□□□□ -1.1
CSI1YMR025W MSC7P38694 644 aa8.19□□□□□ -1.1
CSI1YMR025W BOI2P39969 1040 aa8.19□□□□□ -1.1
CSI1YMR025W HAP4P14064 554 aa8.18□□□□□ -1.1
CSI1YMR025W RPP1AP05318 106 aaPredicted RBP8.17□□□□□ -1.1
CSI1YMR025W GAS4Q08271 471 aa8.17□□□□□ -1.1
CSI1YMR025W SIS2P36024 562 aa8.16□□□□□ -1.1
CSI1YMR025W UBP1P25037 809 aa8.15□□□□□ -1.1
CSI1YMR025W MET1P36150 593 aa8.15□□□□□ -1.1
CSI1YMR025W MTO1P53070 669 aa8.15□□□□□ -1.1
CSI1YMR025W GAL2P13181 574 aa8.14□□□□□ -1.11
CSI1YMR025W YCK2P23292 546 aaKnown RBP8.14□□□□□ -1.11
CSI1YMR025W ROM1P53046 1155 aa8.13□□□□□ -1.11
CSI1YMR025W UTP4Q06679 776 aaKnown RBP8.13□□□□□ -1.11
CSI1YMR025W NGR1P32831 672 aaKnown RBP8.12□□□□□ -1.11
CSI1YMR025W YDR215CQ12240 137 aa8.12□□□□□ -1.11
CSI1YMR025W SCD5P34758 872 aa8.11□□□□□ -1.11
CSI1YMR025W HXT5P38695 592 aa8.11□□□□□ -1.11
CSI1YMR025W SLN1P39928 1220 aaPredicted RBP8.1□□□□□ -1.11
CSI1YMR025W DMA2P53924 522 aa8.09□□□□□ -1.11
CSI1YMR025W HEH2Q03281 663 aa8.09□□□□□ -1.11
CSI1YMR025W TGL4P36165 910 aa8.08□□□□□ -1.12
CSI1YMR025W SKP1P52286 194 aa8.08□□□□□ -1.12
CSI1YMR025W KAP122P32767 1081 aa8.07□□□□□ -1.12
CSI1YMR025W TTI1P36097 1038 aa8.07□□□□□ -1.12
CSI1YMR025W PRK1P40494 810 aa8.07□□□□□ -1.12
CSI1YMR025W CUS1Q02554 436 aaPredicted RBP8.07□□□□□ -1.12
CSI1YMR025W SBP1P10080 294 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms