RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W UTP13Q05946 817 aaKnown RBP5.58□□□□□ -1.52
CTK3YML112W CDC19P00549 500 aaKnown RBP5.57□□□□□ -1.52
CTK3YML112W HAL5P38970 855 aaKnown RBP5.57□□□□□ -1.52
CTK3YML112W DAT1P13483 248 aaKnown RBP5.56□□□□□ -1.52
CTK3YML112W SBE2P42223 864 aaKnown RBP5.56□□□□□ -1.52
CTK3YML112W MRX10Q05648 414 aa5.56□□□□□ -1.52
CTK3YML112W ENO1P00924 437 aaKnown RBP5.55□□□□□ -1.52
CTK3YML112W SPT2P06843 333 aaPredicted RBP5.55□□□□□ -1.52
CTK3YML112W RDS2P19541 446 aaKnown RBP5.55□□□□□ -1.52
CTK3YML112W DLD3P39976 496 aaKnown RBP5.55□□□□□ -1.52
CTK3YML112W WTM2Q12206 467 aa5.55□□□□□ -1.52
CTK3YML112W UTR2P32623 467 aa5.54□□□□□ -1.52
CTK3YML112W HDA3Q06623 655 aa5.54□□□□□ -1.52
CTK3YML112W TBS1P38114 1094 aa5.53□□□□□ -1.52
CTK3YML112W CUZ1P53899 274 aa5.53□□□□□ -1.52
CTK3YML112W SKN7P38889 622 aa5.52□□□□□ -1.53
CTK3YML112W TDA6Q06466 467 aa5.52□□□□□ -1.53
CTK3YML112W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
CTK3YML112W DAL1P32375 460 aa5.5□□□□□ -1.53
CTK3YML112W PEP12P32854 288 aa5.49□□□□□ -1.53
CTK3YML112W UTP7P40055 554 aaKnown RBP5.49□□□□□ -1.53
CTK3YML112W SLX8P40072 274 aa5.49□□□□□ -1.53
CTK3YML112W VTC4P47075 721 aa5.49□□□□□ -1.53
CTK3YML112W SSN3P39073 555 aa5.48□□□□□ -1.53
CTK3YML112W AIM9P40053 627 aaKnown RBP5.47□□□□□ -1.53
CTK3YML112W MSN5P52918 1224 aa5.47□□□□□ -1.53
CTK3YML112W ALA1P40825 983 aaKnown RBP5.46□□□□□ -1.54
CTK3YML112W YFL034WP43564 1073 aa5.46□□□□□ -1.54
CTK3YML112W SUM1P46676 1062 aa5.46□□□□□ -1.54
CTK3YML112W YMR187CQ03236 431 aa5.46□□□□□ -1.54
CTK3YML112W SWI5P08153 709 aa5.45□□□□□ -1.54
CTK3YML112W PDI1P17967 522 aaKnown RBP5.45□□□□□ -1.54
CTK3YML112W CEM1P39525 442 aa5.45□□□□□ -1.54
CTK3YML112W KTR7P40504 517 aa5.45□□□□□ -1.54
CTK3YML112W TSC13Q99190 310 aa5.45□□□□□ -1.54
CTK3YML112W SLA1P32790 1244 aa5.44□□□□□ -1.54
CTK3YML112W NTH2P35172 780 aa5.44□□□□□ -1.54
CTK3YML112W YCK2P23292 546 aaKnown RBP5.43□□□□□ -1.54
CTK3YML112W SIS2P36024 562 aa5.43□□□□□ -1.54
CTK3YML112W TTI1P36097 1038 aa5.43□□□□□ -1.54
CTK3YML112W RPS6AP0CX37 236 aaKnown RBP5.42□□□□□ -1.54
CTK3YML112W RPS6BP0CX38 236 aaPredicted RBP5.42□□□□□ -1.54
CTK3YML112W AHP1P38013 176 aaKnown RBP5.42□□□□□ -1.54
CTK3YML112W PHO87P25360 923 aa5.41□□□□□ -1.54
CTK3YML112W UBP15P50101 1230 aa5.41□□□□□ -1.54
CTK3YML112W ACS2P52910 683 aaKnown RBP5.41□□□□□ -1.54
CTK3YML112W TY1A-DR3Q12441 440 aa5.41□□□□□ -1.54
CTK3YML112W IRE1P32361 1115 aa5.4□□□□□ -1.54
CTK3YML112W JJJ2P46997 583 aa5.4□□□□□ -1.54
CTK3YML112W ADE12P80210 433 aaKnown RBP5.4□□□□□ -1.54
CTK3YML112W YPQ2Q06328 317 aa5.4□□□□□ -1.54
CTK3YML112W SYT1Q06836 1226 aa5.4□□□□□ -1.54
CTK3YML112W GAL2P13181 574 aa5.39□□□□□ -1.55
CTK3YML112W HAP4P14064 554 aa5.39□□□□□ -1.55
CTK3YML112W TGL4P36165 910 aa5.39□□□□□ -1.55
CTK3YML112W CPS1P27614 576 aa5.38□□□□□ -1.55
CTK3YML112W SHM1P37292 490 aaPredicted RBP5.38□□□□□ -1.55
CTK3YML112W MCA1Q08601 432 aa5.38□□□□□ -1.55
CTK3YML112W CYT1P07143 309 aa5.37□□□□□ -1.55
CTK3YML112W AMN1P38285 549 aaPredicted RBP5.37□□□□□ -1.55
CTK3YML112W SLN1P39928 1220 aaPredicted RBP5.37□□□□□ -1.55
CTK3YML112W GLT1Q12680 2145 aaKnown RBP5.37□□□□□ -1.55
CTK3YML112W RPS31P05759 152 aaKnown RBP5.36□□□□□ -1.55
CTK3YML112W MCM1P11746 286 aa5.36□□□□□ -1.55
CTK3YML112W ECM23Q02710 187 aa5.36□□□□□ -1.55
CTK3YML112W GAS4Q08271 471 aa5.36□□□□□ -1.55
CTK3YML112W DIT1P21623 536 aa5.35□□□□□ -1.55
CTK3YML112W ROM1P53046 1155 aa5.35□□□□□ -1.55
CTK3YML112W YNR014WP53719 212 aa5.35□□□□□ -1.55
CTK3YML112W YMR265CQ03508 461 aaKnown RBP5.35□□□□□ -1.55
CTK3YML112W YDR215CQ12240 137 aa5.35□□□□□ -1.55
CTK3YML112W PDC6P26263 563 aaKnown RBP5.34□□□□□ -1.55
CTK3YML112W MCX1P38323 520 aaPredicted RBP5.34□□□□□ -1.55
CTK3YML112W PSH1Q12161 406 aa5.34□□□□□ -1.55
CTK3YML112W PUP1P25043 261 aa5.33□□□□□ -1.56
CTK3YML112W YNL165WP53891 406 aa5.33□□□□□ -1.56
CTK3YML112W KRE33P53914 1056 aaKnown RBP5.33□□□□□ -1.56
CTK3YML112W Q0182Q9ZZW1 134 aa5.33□□□□□ -1.56
CTK3YML112W VAN1P23642 535 aa5.32□□□□□ -1.56
CTK3YML112W UBP1P25037 809 aa5.32□□□□□ -1.56
CTK3YML112W NGR1P32831 672 aaKnown RBP5.32□□□□□ -1.56
CTK3YML112W MRPL16P38064 232 aa5.32□□□□□ -1.56
CTK3YML112W UBX7P38349 436 aa5.32□□□□□ -1.56
CTK3YML112W RLF2Q12495 606 aa5.32□□□□□ -1.56
CTK3YML112W SSA4P22202 642 aaKnown RBP5.31□□□□□ -1.56
CTK3YML112W YTA6P40328 754 aa5.3□□□□□ -1.56
CTK3YML112W YDR461C-AQ2V2P7 80 aa5.3□□□□□ -1.56
CTK3YML112W LEU1P07264 779 aaKnown RBP5.29□□□□□ -1.56
CTK3YML112W MLF3P32047 452 aa5.29□□□□□ -1.56
CTK3YML112W MAC1P35192 417 aa5.29□□□□□ -1.56
CTK3YML112W HXT5P38695 592 aa5.28□□□□□ -1.56
CTK3YML112W SPR3P41901 512 aa5.28□□□□□ -1.56
CTK3YML112W LSB6P42951 607 aa5.28□□□□□ -1.56
CTK3YML112W CWH41P53008 833 aa5.28□□□□□ -1.56
CTK3YML112W STB3Q12427 513 aa5.28□□□□□ -1.56
CTK3YML112W TRS33Q99394 268 aa5.28□□□□□ -1.56
CTK3YML112W FPS1P23900 669 aa5.27□□□□□ -1.57
CTK3YML112W ALD2P47771 506 aa5.27□□□□□ -1.57
CTK3YML112W NOB1Q08444 459 aaKnown RBP5.27□□□□□ -1.57
CTK3YML112W RGP1P16664 663 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms