RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W DAT1P13483 248 aaKnown RBP6.3□□□□□ -1.4
CST9YLR394W UTR2P32623 467 aa6.3□□□□□ -1.4
CST9YLR394W AHP1P38013 176 aaKnown RBP6.3□□□□□ -1.4
CST9YLR394W SPT5P27692 1063 aaKnown RBP6.29□□□□□ -1.4
CST9YLR394W YBL036CP38197 257 aa6.29□□□□□ -1.4
CST9YLR394W YMR187CQ03236 431 aa6.29□□□□□ -1.4
CST9YLR394W MCM16Q12262 181 aa6.29□□□□□ -1.4
CST9YLR394W SBP1P10080 294 aaKnown RBP6.28□□□□□ -1.4
CST9YLR394W ISF1P32488 338 aa6.28□□□□□ -1.4
CST9YLR394W EMP47P43555 445 aa6.28□□□□□ -1.4
CST9YLR394W YDJ1P25491 409 aaKnown RBP6.27□□□□□ -1.41
CST9YLR394W TBS1P38114 1094 aa6.27□□□□□ -1.41
CST9YLR394W BRL1P38770 471 aa6.27□□□□□ -1.41
CST9YLR394W MCX1P38323 520 aaPredicted RBP6.25□□□□□ -1.41
CST9YLR394W BIO2P32451 375 aa6.25□□□□□ -1.41
CST9YLR394W UTP7P40055 554 aaKnown RBP6.25□□□□□ -1.41
CST9YLR394W SUM1P46676 1062 aa6.25□□□□□ -1.41
CST9YLR394W YNR014WP53719 212 aa6.25□□□□□ -1.41
CST9YLR394W GPM1P00950 247 aaKnown RBP6.24□□□□□ -1.41
CST9YLR394W HAL5P38970 855 aaKnown RBP6.24□□□□□ -1.41
CST9YLR394W BIM1P40013 344 aa6.23□□□□□ -1.41
CST9YLR394W ALA1P40825 983 aaKnown RBP6.23□□□□□ -1.41
CST9YLR394W JJJ2P46997 583 aa6.23□□□□□ -1.41
CST9YLR394W FPS1P23900 669 aa6.22□□□□□ -1.41
CST9YLR394W IRE1P32361 1115 aa6.22□□□□□ -1.41
CST9YLR394W ATG32P40458 529 aa6.22□□□□□ -1.41
CST9YLR394W YJL007CP47080 104 aa6.22□□□□□ -1.41
CST9YLR394W HGH1P48362 394 aaKnown RBP6.22□□□□□ -1.41
CST9YLR394W SUP45P12385 437 aaKnown RBP6.2□□□□□ -1.42
CST9YLR394W SLX8P40072 274 aa6.2□□□□□ -1.42
CST9YLR394W RLF2Q12495 606 aa6.2□□□□□ -1.42
CST9YLR394W YCK2P23292 546 aaKnown RBP6.19□□□□□ -1.42
CST9YLR394W BOI2P39969 1040 aa6.19□□□□□ -1.42
CST9YLR394W UTP13Q05946 817 aaKnown RBP6.19□□□□□ -1.42
CST9YLR394W SHM1P37292 490 aaPredicted RBP6.18□□□□□ -1.42
CST9YLR394W ATG3P40344 310 aa6.18□□□□□ -1.42
CST9YLR394W ENO2P00925 437 aaKnown RBP6.17□□□□□ -1.42
CST9YLR394W MRPL16P38064 232 aa6.17□□□□□ -1.42
CST9YLR394W YNL108CP53929 270 aa6.17□□□□□ -1.42
CST9YLR394W YDR215CQ12240 137 aa6.17□□□□□ -1.42
CST9YLR394W MET1P36150 593 aa6.16□□□□□ -1.42
CST9YLR394W SOH1P38633 127 aa6.16□□□□□ -1.42
CST9YLR394W YPP1P46951 817 aa6.16□□□□□ -1.42
CST9YLR394W HDA3Q06623 655 aa6.16□□□□□ -1.42
CST9YLR394W PSH1Q12161 406 aa6.16□□□□□ -1.42
CST9YLR394W PDC6P26263 563 aaKnown RBP6.16□□□□□ -1.42
CST9YLR394W KNS1P32350 737 aaPredicted RBP6.16□□□□□ -1.42
CST9YLR394W TIF1P10081 395 aaKnown RBP6.15□□□□□ -1.43
CST9YLR394W AMN1P38285 549 aaPredicted RBP6.14□□□□□ -1.43
CST9YLR394W SLN1P39928 1220 aaPredicted RBP6.14□□□□□ -1.43
CST9YLR394W RIM21P48565 533 aa6.14□□□□□ -1.43
CST9YLR394W PDC5P16467 563 aaKnown RBP6.13□□□□□ -1.43
CST9YLR394W SPR3P41901 512 aa6.13□□□□□ -1.43
CST9YLR394W STB3Q12427 513 aa6.13□□□□□ -1.43
CST9YLR394W RDS2P19541 446 aaKnown RBP6.12□□□□□ -1.43
CST9YLR394W RPS31P05759 152 aaKnown RBP6.11□□□□□ -1.43
CST9YLR394W TY1A-DR2Q03964 440 aaKnown RBP6.11□□□□□ -1.43
CST9YLR394W YPQ2Q06328 317 aa6.11□□□□□ -1.43
CST9YLR394W LSB6P42951 607 aa6.1□□□□□ -1.43
CST9YLR394W MCA1Q08601 432 aa6.1□□□□□ -1.43
CST9YLR394W TAT1P38085 619 aa6.09□□□□□ -1.43
CST9YLR394W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
CST9YLR394W LEU1P07264 779 aaKnown RBP6.08□□□□□ -1.44
CST9YLR394W RTG2P32608 588 aaKnown RBP6.08□□□□□ -1.44
CST9YLR394W MRX10Q05648 414 aa6.08□□□□□ -1.44
CST9YLR394W RPP1AP05318 106 aaPredicted RBP6.07□□□□□ -1.44
CST9YLR394W SWI5P08153 709 aa6.07□□□□□ -1.44
CST9YLR394W RPL34BP40525 121 aaKnown RBP6.07□□□□□ -1.44
CST9YLR394W ENO1P00924 437 aaKnown RBP6.06□□□□□ -1.44
CST9YLR394W TTI1P36097 1038 aa6.05□□□□□ -1.44
CST9YLR394W MSC7P38694 644 aa6.05□□□□□ -1.44
CST9YLR394W AIM9P40053 627 aaKnown RBP6.05□□□□□ -1.44
CST9YLR394W PRY1P47032 299 aa6.04□□□□□ -1.44
CST9YLR394W ALD2P47771 506 aa6.04□□□□□ -1.44
CST9YLR394W MCM1P11746 286 aa6.03□□□□□ -1.44
CST9YLR394W RGP1P16664 663 aa6.02□□□□□ -1.45
CST9YLR394W YPL034WQ03083 165 aa6.02□□□□□ -1.45
CST9YLR394W RPS6AP0CX37 236 aaKnown RBP6.01□□□□□ -1.45
CST9YLR394W RPS6BP0CX38 236 aaPredicted RBP6.01□□□□□ -1.45
CST9YLR394W CPS1P27614 576 aa6.01□□□□□ -1.45
CST9YLR394W MAC1P35192 417 aa6.01□□□□□ -1.45
CST9YLR394W YFL034WP43564 1073 aa6.01□□□□□ -1.45
CST9YLR394W YNL165WP53891 406 aa6.01□□□□□ -1.45
CST9YLR394W GLT1Q12680 2145 aaKnown RBP6.01□□□□□ -1.45
CST9YLR394W YTA6P40328 754 aa6□□□□□ -1.45
CST9YLR394W PEP12P32854 288 aa5.99□□□□□ -1.45
CST9YLR394W TPS3P38426 1054 aaKnown RBP5.99□□□□□ -1.45
CST9YLR394W SUB2Q07478 446 aaKnown RBP5.99□□□□□ -1.45
CST9YLR394W NTH2P35172 780 aa5.98□□□□□ -1.45
CST9YLR394W NHA1Q99271 985 aa5.98□□□□□ -1.45
CST9YLR394W PDI1P17967 522 aaKnown RBP5.97□□□□□ -1.45
CST9YLR394W HEH2Q03281 663 aa5.97□□□□□ -1.45
CST9YLR394W MLF3P32047 452 aa5.96□□□□□ -1.46
CST9YLR394W BUD9P53226 547 aa5.96□□□□□ -1.46
CST9YLR394W NOB1Q08444 459 aaKnown RBP5.96□□□□□ -1.46
CST9YLR394W TSC13Q99190 310 aa5.96□□□□□ -1.46
CST9YLR394W PGM2P37012 569 aaKnown RBP5.95□□□□□ -1.46
CST9YLR394W ALO1P54783 526 aaKnown RBP5.95□□□□□ -1.46
CST9YLR394W PUP1P25043 261 aa5.94□□□□□ -1.46
CST9YLR394W ALG14P38242 237 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms