RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W GAL2P13181 574 aa7.07□□□□□ -1.28
SMD2YLR275W DAL1P32375 460 aa7.07□□□□□ -1.28
SMD2YLR275W NTH2P35172 780 aa7.07□□□□□ -1.28
SMD2YLR275W SSN3P39073 555 aa7.07□□□□□ -1.28
SMD2YLR275W ACO2P39533 789 aa7.07□□□□□ -1.28
SMD2YLR275W MSN5P52918 1224 aa7.07□□□□□ -1.28
SMD2YLR275W HAP4P14064 554 aa7.06□□□□□ -1.28
SMD2YLR275W OSH7P38755 437 aa7.06□□□□□ -1.28
SMD2YLR275W ACS2P52910 683 aaKnown RBP7.06□□□□□ -1.28
SMD2YLR275W CAF120P53836 1060 aa7.06□□□□□ -1.28
SMD2YLR275W YDL176WQ12027 708 aa7.06□□□□□ -1.28
SMD2YLR275W SSA4P22202 642 aaKnown RBP7.05□□□□□ -1.28
SMD2YLR275W ALA1P40825 983 aaKnown RBP7.04□□□□□ -1.28
SMD2YLR275W ECM23Q02710 187 aa7.04□□□□□ -1.28
SMD2YLR275W GAS4Q08271 471 aa7.04□□□□□ -1.28
SMD2YLR275W CDC19P00549 500 aaKnown RBP7.03□□□□□ -1.28
SMD2YLR275W AHP1P38013 176 aaKnown RBP7.03□□□□□ -1.28
SMD2YLR275W YIR007WP40566 764 aa7.03□□□□□ -1.28
SMD2YLR275W YPL062WQ02781 134 aa7.03□□□□□ -1.28
SMD2YLR275W CYT1P07143 309 aa7.02□□□□□ -1.29
SMD2YLR275W YPQ2Q06328 317 aa7.02□□□□□ -1.29
SMD2YLR275W PUP1P25043 261 aa7.01□□□□□ -1.29
SMD2YLR275W SLA1P32790 1244 aa7.01□□□□□ -1.29
SMD2YLR275W ROG3P43602 733 aa7.01□□□□□ -1.29
SMD2YLR275W JJJ2P46997 583 aa7.01□□□□□ -1.29
SMD2YLR275W TY1A-DR3Q12441 440 aa7.01□□□□□ -1.29
SMD2YLR275W ROM1P53046 1155 aa7□□□□□ -1.29
SMD2YLR275W TY1A-MR1Q04215 440 aa7□□□□□ -1.29
SMD2YLR275W MCM1P11746 286 aa6.99□□□□□ -1.29
SMD2YLR275W UBP15P50101 1230 aa6.99□□□□□ -1.29
SMD2YLR275W UBP1P25037 809 aa6.98□□□□□ -1.29
SMD2YLR275W UBX7P38349 436 aa6.98□□□□□ -1.29
SMD2YLR275W IRE1P32361 1115 aa6.97□□□□□ -1.29
SMD2YLR275W NAM8Q00539 523 aaKnown RBP6.97□□□□□ -1.29
SMD2YLR275W VAN1P23642 535 aa6.96□□□□□ -1.3
SMD2YLR275W SHM1P37292 490 aaPredicted RBP6.96□□□□□ -1.3
SMD2YLR275W RGA1P39083 1007 aa6.96□□□□□ -1.3
SMD2YLR275W NOB1Q08444 459 aaKnown RBP6.96□□□□□ -1.3
SMD2YLR275W CCP1P00431 361 aa6.95□□□□□ -1.3
SMD2YLR275W YML083CQ04526 418 aa6.95□□□□□ -1.3
SMD2YLR275W SUB2Q07478 446 aaKnown RBP6.95□□□□□ -1.3
SMD2YLR275W NGR1P32831 672 aaKnown RBP6.93□□□□□ -1.3
SMD2YLR275W TRS33Q99394 268 aa6.93□□□□□ -1.3
SMD2YLR275W RPS31P05759 152 aaKnown RBP6.92□□□□□ -1.3
SMD2YLR275W YNL165WP53891 406 aa6.92□□□□□ -1.3
SMD2YLR275W TAF7Q05021 590 aa6.92□□□□□ -1.3
SMD2YLR275W PSH1Q12161 406 aa6.92□□□□□ -1.3
SMD2YLR275W PDC6P26263 563 aaKnown RBP6.91□□□□□ -1.3
SMD2YLR275W CWH41P53008 833 aa6.91□□□□□ -1.3
SMD2YLR275W CUZ1P53899 274 aa6.91□□□□□ -1.3
SMD2YLR275W YTA6P40328 754 aa6.9□□□□□ -1.3
SMD2YLR275W YGR035CP53222 116 aa6.9□□□□□ -1.3
SMD2YLR275W PUF6Q04373 656 aaKnown RBP6.9□□□□□ -1.3
SMD2YLR275W HPF1Q05164 967 aa6.9□□□□□ -1.3
SMD2YLR275W Q0182Q9ZZW1 134 aa6.9□□□□□ -1.3
SMD2YLR275W MLF3P32047 452 aa6.89□□□□□ -1.31
SMD2YLR275W SCD5P34758 872 aa6.89□□□□□ -1.31
SMD2YLR275W YMR265CQ03508 461 aaKnown RBP6.89□□□□□ -1.31
SMD2YLR275W DIT1P21623 536 aa6.88□□□□□ -1.31
SMD2YLR275W SUV3P32580 737 aa6.88□□□□□ -1.31
SMD2YLR275W HXT5P38695 592 aa6.88□□□□□ -1.31
SMD2YLR275W LEU1P07264 779 aaKnown RBP6.87□□□□□ -1.31
SMD2YLR275W UTP4Q06679 776 aaKnown RBP6.87□□□□□ -1.31
SMD2YLR275W CEM1P39525 442 aa6.86□□□□□ -1.31
SMD2YLR275W LYS5P50113 272 aa6.86□□□□□ -1.31
SMD2YLR275W PUN1Q06991 263 aa6.86□□□□□ -1.31
SMD2YLR275W ALD4P46367 519 aaKnown RBP6.85□□□□□ -1.31
SMD2YLR275W ALD2P47771 506 aa6.85□□□□□ -1.31
SMD2YLR275W KRE33P53914 1056 aaKnown RBP6.85□□□□□ -1.31
SMD2YLR275W DPH6Q12429 685 aa6.85□□□□□ -1.31
SMD2YLR275W MRPL16P38064 232 aa6.84□□□□□ -1.31
SMD2YLR275W CWC15Q03772 175 aaKnown RBP6.84□□□□□ -1.31
SMD2YLR275W CAB1Q04430 367 aa6.84□□□□□ -1.31
SMD2YLR275W STB3Q12427 513 aa6.84□□□□□ -1.31
SMD2YLR275W SRS2P12954 1174 aa6.83□□□□□ -1.32
SMD2YLR275W JJJ3P47138 172 aa6.83□□□□□ -1.32
SMD2YLR275W FOX2Q02207 900 aaKnown RBP6.83□□□□□ -1.32
SMD2YLR275W YDR461C-AQ2V2P7 80 aa6.83□□□□□ -1.32
SMD2YLR275W SSA1P10591 642 aaKnown RBP6.82□□□□□ -1.32
SMD2YLR275W RGP1P16664 663 aa6.82□□□□□ -1.32
SMD2YLR275W TRK2P28584 889 aa6.82□□□□□ -1.32
SMD2YLR275W MTO1P53070 669 aa6.82□□□□□ -1.32
SMD2YLR275W ADE12P80210 433 aaKnown RBP6.82□□□□□ -1.32
SMD2YLR275W RPL34AP87262 121 aaPredicted RBP6.82□□□□□ -1.32
SMD2YLR275W SYT1Q06836 1226 aa6.82□□□□□ -1.32
SMD2YLR275W YBR197CP38306 217 aa6.81□□□□□ -1.32
SMD2YLR275W RPP1AP05318 106 aaPredicted RBP6.8□□□□□ -1.32
SMD2YLR275W FPS1P23900 669 aa6.8□□□□□ -1.32
SMD2YLR275W SPR3P41901 512 aa6.8□□□□□ -1.32
SMD2YLR275W MRPL33P20084 86 aa6.79□□□□□ -1.32
SMD2YLR275W KAP122P32767 1081 aa6.79□□□□□ -1.32
SMD2YLR275W TPS3P38426 1054 aaKnown RBP6.79□□□□□ -1.32
SMD2YLR275W PNP1Q05788 311 aa6.79□□□□□ -1.32
SMD2YLR275W ISC10P32645 267 aa6.78□□□□□ -1.32
SMD2YLR275W QDR2P40474 542 aa6.78□□□□□ -1.32
SMD2YLR275W VMA3P25515 160 aa6.76□□□□□ -1.33
SMD2YLR275W RPC31P17890 251 aa6.75□□□□□ -1.33
SMD2YLR275W RRN6P32786 894 aa6.75□□□□□ -1.33
SMD2YLR275W SKP1P52286 194 aa6.75□□□□□ -1.33
SMD2YLR275W CUS1Q02554 436 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms