RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C SSA4P22202 642 aaKnown RBP6.82□□□□□ -1.32
SSK1YLR006C GRX4P32642 244 aa6.82□□□□□ -1.32
SSK1YLR006C SSB2P40150 613 aaKnown RBP6.82□□□□□ -1.32
SSK1YLR006C COG4Q06096 861 aa6.82□□□□□ -1.32
SSK1YLR006C SIR4P11978 1358 aa6.82□□□□□ -1.32
SSK1YLR006C GAS4Q08271 471 aa6.81□□□□□ -1.32
SSK1YLR006C SPT2P06843 333 aaPredicted RBP6.8□□□□□ -1.32
SSK1YLR006C PBS2P08018 668 aa6.8□□□□□ -1.32
SSK1YLR006C CDC3P32457 520 aaKnown RBP6.8□□□□□ -1.32
SSK1YLR006C NOC2P39744 710 aaKnown RBP6.8□□□□□ -1.32
SSK1YLR006C GDE1Q02979 1223 aa6.8□□□□□ -1.32
SSK1YLR006C TY1B-AO13527 1196 aaKnown RBP6.8□□□□□ -1.32
SSK1YLR006C DIT2P21595 489 aa6.8□□□□□ -1.32
SSK1YLR006C ROX1P25042 368 aa6.8□□□□□ -1.32
SSK1YLR006C BIO2P32451 375 aa6.8□□□□□ -1.32
SSK1YLR006C PPX1P38698 397 aa6.8□□□□□ -1.32
SSK1YLR006C MAG2Q06436 670 aaKnown RBP6.8□□□□□ -1.32
SSK1YLR006C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SSK1YLR006C CPS1P27614 576 aa6.79□□□□□ -1.32
SSK1YLR006C BIM1P40013 344 aa6.79□□□□□ -1.32
SSK1YLR006C ATG32P40458 529 aa6.79□□□□□ -1.32
SSK1YLR006C MTR4P47047 1073 aaKnown RBP6.79□□□□□ -1.32
SSK1YLR006C NUP42P49686 430 aaKnown RBP6.79□□□□□ -1.32
SSK1YLR006C NOP53Q12080 455 aaKnown RBP6.79□□□□□ -1.32
SSK1YLR006C ERP4Q12450 207 aa6.79□□□□□ -1.32
SSK1YLR006C TY4B-HP0C2J7 1802 aa6.79□□□□□ -1.32
SSK1YLR006C TY4B-JP47024 1803 aa6.79□□□□□ -1.32
SSK1YLR006C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SSK1YLR006C YOL098CQ12496 1037 aa6.79□□□□□ -1.32
SSK1YLR006C DPS1P04802 557 aaKnown RBP6.78□□□□□ -1.32
SSK1YLR006C CIT2P08679 460 aa6.78□□□□□ -1.32
SSK1YLR006C RPS24AP0CX31 135 aaKnown RBP6.78□□□□□ -1.32
SSK1YLR006C RPS24BP0CX32 135 aaKnown RBP6.78□□□□□ -1.32
SSK1YLR006C STM1P39015 273 aaKnown RBP6.78□□□□□ -1.32
SSK1YLR006C CEF1Q03654 590 aaPredicted RBP6.78□□□□□ -1.32
SSK1YLR006C RPO41P13433 1351 aaKnown RBP6.78□□□□□ -1.32
SSK1YLR006C TRP5P00931 707 aaKnown RBP6.77□□□□□ -1.33
SSK1YLR006C MAL31P38156 614 aa6.77□□□□□ -1.33
SSK1YLR006C PES4P39684 611 aa6.77□□□□□ -1.33
SSK1YLR006C RRP5Q05022 1729 aaKnown RBP6.77□□□□□ -1.33
SSK1YLR006C OPI1P21957 404 aa6.77□□□□□ -1.33
SSK1YLR006C RAM2P29703 316 aa6.77□□□□□ -1.33
SSK1YLR006C MFT1P33441 392 aaKnown RBP6.77□□□□□ -1.33
SSK1YLR006C FUI1P38196 639 aa6.77□□□□□ -1.33
SSK1YLR006C ALG12P53730 551 aa6.77□□□□□ -1.33
SSK1YLR006C NSE3Q05541 303 aa6.77□□□□□ -1.33
SSK1YLR006C NKP1Q12493 238 aa6.77□□□□□ -1.33
SSK1YLR006C VPS5Q92331 675 aa6.77□□□□□ -1.33
SSK1YLR006C YIL177CP40434 1758 aa6.76□□□□□ -1.33
SSK1YLR006C YJL225CP40889 1758 aa6.76□□□□□ -1.33
SSK1YLR006C VPS24P36095 224 aaKnown RBP6.76□□□□□ -1.33
SSK1YLR006C YRF1-4O13559 1382 aa6.76□□□□□ -1.33
SSK1YLR006C APC1P53886 1748 aa6.76□□□□□ -1.33
SSK1YLR006C MAK16P10962 306 aaPredicted RBP6.76□□□□□ -1.33
SSK1YLR006C ATE1P16639 503 aa6.76□□□□□ -1.33
SSK1YLR006C YBR287WP38355 427 aa6.76□□□□□ -1.33
SSK1YLR006C OYE2Q03558 400 aaKnown RBP6.76□□□□□ -1.33
SSK1YLR006C HAT1Q12341 374 aa6.76□□□□□ -1.33
SSK1YLR006C SLN1P39928 1220 aaPredicted RBP6.75□□□□□ -1.33
SSK1YLR006C IOC3P43596 787 aa6.75□□□□□ -1.33
SSK1YLR006C ERG12P07277 443 aa6.74□□□□□ -1.33
SSK1YLR006C KAR1P11927 433 aa6.74□□□□□ -1.33
SSK1YLR006C AKL1P38080 1108 aaKnown RBP6.74□□□□□ -1.33
SSK1YLR006C RRT14P40470 206 aa6.74□□□□□ -1.33
SSK1YLR006C TFG1P41895 735 aaPredicted RBP6.74□□□□□ -1.33
SSK1YLR006C TAF1P46677 1066 aa6.74□□□□□ -1.33
SSK1YLR006C YNR029CP53729 429 aaKnown RBP6.74□□□□□ -1.33
SSK1YLR006C ESF2P53743 316 aaKnown RBP6.74□□□□□ -1.33
SSK1YLR006C RNA1P11745 407 aaKnown RBP6.74□□□□□ -1.33
SSK1YLR006C RRP14P36080 434 aaKnown RBP6.74□□□□□ -1.33
SSK1YLR006C GLO3P38682 493 aaKnown RBP6.74□□□□□ -1.33
SSK1YLR006C ILV3P39522 585 aaKnown RBP6.74□□□□□ -1.33
SSK1YLR006C DSD1P53095 428 aa6.74□□□□□ -1.33
SSK1YLR006C ENT2Q05785 613 aa6.74□□□□□ -1.33
SSK1YLR006C PPG1P32838 368 aa6.73□□□□□ -1.33
SSK1YLR006C YRF1-2P40105 1681 aa6.73□□□□□ -1.33
SSK1YLR006C MCM1P11746 286 aa6.73□□□□□ -1.33
SSK1YLR006C MSP1P28737 362 aa6.73□□□□□ -1.33
SSK1YLR006C BLI1P35727 113 aa6.73□□□□□ -1.33
SSK1YLR006C SEC6P32844 805 aa6.72□□□□□ -1.33
SSK1YLR006C GYP7P48365 746 aa6.72□□□□□ -1.33
SSK1YLR006C ITC1P53125 1264 aa6.72□□□□□ -1.33
SSK1YLR006C FKS3Q04952 1785 aa6.72□□□□□ -1.33
SSK1YLR006C MUM2P38236 366 aa6.71□□□□□ -1.33
SSK1YLR006C SPO1P53541 631 aa6.71□□□□□ -1.33
SSK1YLR006C YML083CQ04526 418 aa6.71□□□□□ -1.33
SSK1YLR006C RAD50P12753 1312 aa6.71□□□□□ -1.34
SSK1YLR006C HSP82P02829 709 aaKnown RBP6.71□□□□□ -1.34
SSK1YLR006C YNG2P38806 282 aaKnown RBP6.71□□□□□ -1.34
SSK1YLR006C IES1P43579 692 aa6.71□□□□□ -1.34
SSK1YLR006C RPL34AP87262 121 aaPredicted RBP6.71□□□□□ -1.34
SSK1YLR006C MAK10Q02197 733 aa6.71□□□□□ -1.34
SSK1YLR006C SYH1Q02875 849 aaKnown RBP6.71□□□□□ -1.34
SSK1YLR006C NKP2Q06162 153 aa6.71□□□□□ -1.34
SSK1YLR006C ADE6P38972 1358 aaKnown RBP6.7□□□□□ -1.34
SSK1YLR006C TTI1P36097 1038 aa6.7□□□□□ -1.34
SSK1YLR006C ARL1P38116 183 aaKnown RBP6.7□□□□□ -1.34
SSK1YLR006C SEC9P40357 651 aa6.7□□□□□ -1.34
SSK1YLR006C SRT1Q03175 343 aa6.7□□□□□ -1.34
SSK1YLR006C CSI1Q04368 295 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms