RNA–Protein interactions for RNA: YKR008W

RSC4, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC4, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC4YKR008W UBP12P39538 1254 aa10.1□□□□□ -0.79
RSC4YKR008W YGL081WP53156 320 aa10.1□□□□□ -0.79
RSC4YKR008W YOL036WQ08206 761 aa10.1□□□□□ -0.79
RSC4YKR008W PSK2Q08217 1101 aa10.1□□□□□ -0.79
RSC4YKR008W YGR161W-CQ3E744 92 aa10.1□□□□□ -0.79
RSC4YKR008W AI4P03878 556 aa10.09□□□□□ -0.79
RSC4YKR008W SSD1P24276 1250 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
RSC4YKR008W BLI1P35727 113 aa10.09□□□□□ -0.79
RSC4YKR008W ENP1P38333 483 aaKnown RBP10.09□□□□□ -0.79
RSC4YKR008W RPT1P33299 467 aaKnown RBP10.08□□□□□ -0.8
RSC4YKR008W ESF2P53743 316 aaKnown RBP10.08□□□□□ -0.8
RSC4YKR008W YNL115CP53925 644 aa10.08□□□□□ -0.8
RSC4YKR008W RMD1Q03441 430 aa10.08□□□□□ -0.8
RSC4YKR008W CLN2P20438 545 aa10.07□□□□□ -0.8
RSC4YKR008W LSO1Q3E827 93 aa10.07□□□□□ -0.8
RSC4YKR008W ESF1Q06344 628 aaKnown RBP10.06□□□□□ -0.8
RSC4YKR008W PPM2Q08282 695 aa10.06□□□□□ -0.8
RSC4YKR008W RTF1P53064 558 aa10.06□□□□□ -0.8
RSC4YKR008W CDC73Q06697 393 aa10.06□□□□□ -0.8
RSC4YKR008W DAK2P43550 591 aa10.05□□□□□ -0.8
RSC4YKR008W TUM1Q08686 304 aaKnown RBP10.05□□□□□ -0.8
RSC4YKR008W MET6P05694 767 aaKnown RBP10.04□□□□□ -0.8
RSC4YKR008W BOI1P38041 980 aaKnown RBP10.04□□□□□ -0.8
RSC4YKR008W SYH1Q02875 849 aaKnown RBP10.04□□□□□ -0.8
RSC4YKR008W TRS120Q04183 1289 aa10.04□□□□□ -0.8
RSC4YKR008W GAS4Q08271 471 aa10.04□□□□□ -0.8
RSC4YKR008W YOR131CQ12486 218 aa10.04□□□□□ -0.8
RSC4YKR008W YAP5P40574 245 aa10.04□□□□□ -0.8
RSC4YKR008W APL6P46682 809 aa10.04□□□□□ -0.8
RSC4YKR008W PUS6P53294 404 aa10.04□□□□□ -0.8
RSC4YKR008W RTT106P40161 455 aa10.03□□□□□ -0.8
RSC4YKR008W ECM16Q04217 1267 aaKnown RBP10.03□□□□□ -0.8
RSC4YKR008W FRA1Q07825 749 aa10.03□□□□□ -0.8
RSC4YKR008W SUV3P32580 737 aa10.02□□□□□ -0.8
RSC4YKR008W PWP2P25635 923 aaKnown RBP10.02□□□□□ -0.81
RSC4YKR008W RPS26AP39938 119 aaKnown RBP10.02□□□□□ -0.81
RSC4YKR008W RPS26BP39939 119 aaKnown RBP10.02□□□□□ -0.81
RSC4YKR008W YEN1P40028 759 aa10.02□□□□□ -0.81
RSC4YKR008W NUP82P40368 713 aa10.02□□□□□ -0.81
RSC4YKR008W HUL5P53119 910 aa10.02□□□□□ -0.81
RSC4YKR008W COG4Q06096 861 aa10.01□□□□□ -0.81
RSC4YKR008W ERP4Q12450 207 aa10.01□□□□□ -0.81
RSC4YKR008W TSC13Q99190 310 aa10.01□□□□□ -0.81
RSC4YKR008W OPI1P21957 404 aa10□□□□□ -0.81
RSC4YKR008W DCW1P36091 449 aa10□□□□□ -0.81
RSC4YKR008W YPR084WQ06821 456 aa10□□□□□ -0.81
RSC4YKR008W RPP1BP10622 106 aaKnown RBP10□□□□□ -0.81
RSC4YKR008W KAR1P11927 433 aa10□□□□□ -0.81
RSC4YKR008W SOH1P38633 127 aa10□□□□□ -0.81
RSC4YKR008W PKH1Q03407 766 aa10□□□□□ -0.81
RSC4YKR008W CEF1Q03654 590 aaPredicted RBP10□□□□□ -0.81
RSC4YKR008W GRX1P25373 110 aaKnown RBP9.99□□□□□ -0.81
RSC4YKR008W PEP7P32609 515 aa9.99□□□□□ -0.81
RSC4YKR008W SEC6P32844 805 aa9.99□□□□□ -0.81
RSC4YKR008W NMD3P38861 518 aaKnown RBP9.99□□□□□ -0.81
RSC4YKR008W NKP1Q12493 238 aa9.99□□□□□ -0.81
RSC4YKR008W CDC11P32458 415 aa9.98□□□□□ -0.81
RSC4YKR008W UTP14Q04500 899 aaKnown RBP9.98□□□□□ -0.81
RSC4YKR008W UTP13Q05946 817 aaKnown RBP9.98□□□□□ -0.81
RSC4YKR008W TY4B-PA0A0B7P3V8 1104 aa9.98□□□□□ -0.81
RSC4YKR008W PDI1P17967 522 aaKnown RBP9.98□□□□□ -0.81
RSC4YKR008W GRX7P38068 203 aa9.98□□□□□ -0.81
RSC4YKR008W MSH4P40965 878 aaPredicted RBP9.98□□□□□ -0.81
RSC4YKR008W TUB4P53378 473 aa9.98□□□□□ -0.81
RSC4YKR008W TY4A-HQ6Q5P6 413 aa9.98□□□□□ -0.81
RSC4YKR008W VAN1P23642 535 aa9.97□□□□□ -0.81
RSC4YKR008W MNR2P35724 969 aa9.97□□□□□ -0.81
RSC4YKR008W DNM1P54861 757 aa9.97□□□□□ -0.81
RSC4YKR008W ENT2Q05785 613 aa9.97□□□□□ -0.81
RSC4YKR008W TIM23P32897 222 aa9.96□□□□□ -0.81
RSC4YKR008W ATG3P40344 310 aa9.96□□□□□ -0.81
RSC4YKR008W SPR3P41901 512 aa9.96□□□□□ -0.81
RSC4YKR008W STE20Q03497 939 aaKnown RBP9.96□□□□□ -0.81
RSC4YKR008W CYC8P14922 966 aa9.96□□□□□ -0.82
RSC4YKR008W PEX21P50091 288 aa9.96□□□□□ -0.82
RSC4YKR008W ERF2Q06551 359 aa9.96□□□□□ -0.82
RSC4YKR008W PET112P33893 541 aa9.95□□□□□ -0.82
RSC4YKR008W BUD31P25337 157 aaPredicted RBP9.94□□□□□ -0.82
RSC4YKR008W DAN4P47179 1161 aa9.94□□□□□ -0.82
RSC4YKR008W TOS4Q06266 489 aa9.94□□□□□ -0.82
RSC4YKR008W PUS1Q12211 544 aaKnown RBP9.94□□□□□ -0.82
RSC4YKR008W TRS33Q99394 268 aa9.94□□□□□ -0.82
RSC4YKR008W NFU1P32860 256 aa9.93□□□□□ -0.82
RSC4YKR008W IMH1Q06704 911 aaKnown RBP9.93□□□□□ -0.82
RSC4YKR008W TEC1P18412 486 aa9.93□□□□□ -0.82
RSC4YKR008W FUI1P38196 639 aa9.93□□□□□ -0.82
RSC4YKR008W FIG4P42837 879 aa9.93□□□□□ -0.82
RSC4YKR008W ITC1P53125 1264 aa9.93□□□□□ -0.82
RSC4YKR008W YGR122WP53272 402 aa9.93□□□□□ -0.82
RSC4YKR008W CWC24P53769 259 aa9.93□□□□□ -0.82
RSC4YKR008W GDE1Q02979 1223 aa9.93□□□□□ -0.82
RSC4YKR008W YDR341CQ05506 607 aaKnown RBP9.93□□□□□ -0.82
RSC4YKR008W KEX2P13134 814 aa9.92□□□□□ -0.82
RSC4YKR008W SVL3Q03088 825 aaKnown RBP9.92□□□□□ -0.82
RSC4YKR008W PHO8P11491 566 aa9.91□□□□□ -0.82
RSC4YKR008W GUT2P32191 649 aa9.91□□□□□ -0.82
RSC4YKR008W MUM2P38236 366 aa9.91□□□□□ -0.82
RSC4YKR008W FAF1P40546 346 aaPredicted RBP9.91□□□□□ -0.82
RSC4YKR008W RAD4P14736 754 aa9.91□□□□□ -0.82
RSC4YKR008W VPS24P36095 224 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms