RNA–Protein interactions for RNA: YKL073W

LHS1, Transcript of Molecular chaperone of the endoplasmic reticulum lumen, yeast

Gene LHS1, Length 2,646 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LHS1	YKL073W	TY1A-DR3	Q12441	440 aa		2.65	□□□□□ -1.98
LHS1	YKL073W	YMR187C	Q03236	431 aa		2.65	□□□□□ -1.99
LHS1	YKL073W	MCM16	Q12262	181 aa		2.65	□□□□□ -1.99
LHS1	YKL073W	RLF2	Q12495	606 aa		2.65	□□□□□ -1.99
LHS1	YKL073W	SUM1	P46676	1062 aa		2.64	□□□□□ -1.99
LHS1	YKL073W	UTP13	Q05946	817 aa	Known RBP	2.64	□□□□□ -1.99
LHS1	YKL073W	TDA6	Q06466	467 aa		2.64	□□□□□ -1.99
LHS1	YKL073W	ISF1	P32488	338 aa		2.64	□□□□□ -1.99
LHS1	YKL073W	SBE2	P42223	864 aa	Known RBP	2.64	□□□□□ -1.99
LHS1	YKL073W	SBP1	P10080	294 aa	Known RBP	2.63	□□□□□ -1.99
LHS1	YKL073W	MCX1	P38323	520 aa	Predicted RBP	2.63	□□□□□ -1.99
LHS1	YKL073W	GUA1	P38625	525 aa	Known RBP	2.63	□□□□□ -1.99
LHS1	YKL073W	UTP7	P40055	554 aa	Known RBP	2.63	□□□□□ -1.99
LHS1	YKL073W	ATG3	P40344	310 aa		2.63	□□□□□ -1.99
LHS1	YKL073W	ALA1	P40825	983 aa	Known RBP	2.63	□□□□□ -1.99
LHS1	YKL073W	FPS1	P23900	669 aa		2.63	□□□□□ -1.99
LHS1	YKL073W	IRE1	P32361	1115 aa		2.63	□□□□□ -1.99
LHS1	YKL073W	YBL036C	P38197	257 aa		2.63	□□□□□ -1.99
LHS1	YKL073W	JJJ2	P46997	583 aa		2.63	□□□□□ -1.99
LHS1	YKL073W	HPC2	Q01448	625 aa		2.63	□□□□□ -1.99
LHS1	YKL073W	GPM1	P00950	247 aa	Known RBP	2.62	□□□□□ -1.99
LHS1	YKL073W	HAL5	P38970	855 aa	Known RBP	2.62	□□□□□ -1.99
LHS1	YKL073W	SLX8	P40072	274 aa		2.62	□□□□□ -1.99
LHS1	YKL073W	YPP1	P46951	817 aa		2.62	□□□□□ -1.99
LHS1	YKL073W	YNR014W	P53719	212 aa		2.62	□□□□□ -1.99
LHS1	YKL073W	YDJ1	P25491	409 aa	Known RBP	2.61	□□□□□ -1.99
LHS1	YKL073W	IOC4	Q04213	475 aa		2.61	□□□□□ -1.99
LHS1	YKL073W	SIS2	P36024	562 aa		2.61	□□□□□ -1.99
LHS1	YKL073W	MET1	P36150	593 aa		2.61	□□□□□ -1.99
LHS1	YKL073W	BRL1	P38770	471 aa		2.61	□□□□□ -1.99
LHS1	YKL073W	HDA3	Q06623	655 aa		2.61	□□□□□ -1.99
LHS1	YKL073W	SOH1	P38633	127 aa		2.6	□□□□□ -1.99
LHS1	YKL073W	BOI2	P39969	1040 aa		2.6	□□□□□ -1.99
LHS1	YKL073W	SHM1	P37292	490 aa	Predicted RBP	2.6	□□□□□ -1.99
LHS1	YKL073W	MRPL16	P38064	232 aa		2.6	□□□□□ -1.99
LHS1	YKL073W	YFR016C	P43597	1233 aa	Known RBP	2.6	□□□□□ -1.99
LHS1	YKL073W	RPP1A	P05318	106 aa	Predicted RBP	2.59	□□□□□ -1.99
LHS1	YKL073W	YCK2	P23292	546 aa	Known RBP	2.59	□□□□□ -1.99
LHS1	YKL073W	PDC6	P26263	563 aa	Known RBP	2.59	□□□□□ -1.99
LHS1	YKL073W	KNS1	P32350	737 aa	Predicted RBP	2.59	□□□□□ -1.99
LHS1	YKL073W	PSH1	Q12161	406 aa		2.59	□□□□□ -1.99
LHS1	YKL073W	SPR3	P41901	512 aa		2.59	□□□□□ -1.99
LHS1	YKL073W	PDC5	P16467	563 aa	Known RBP	2.58	□□□□□ -2
LHS1	YKL073W	YDR215C	Q12240	137 aa		2.58	□□□□□ -2
LHS1	YKL073W	STB3	Q12427	513 aa		2.58	□□□□□ -2
LHS1	YKL073W	RPS31	P05759	152 aa	Known RBP	2.58	□□□□□ -2
LHS1	YKL073W	SUP45	P12385	437 aa	Known RBP	2.58	□□□□□ -2
LHS1	YKL073W	YPQ2	Q06328	317 aa		2.58	□□□□□ -2
LHS1	YKL073W	GLT1	Q12680	2145 aa	Known RBP	2.58	□□□□□ -2
LHS1	YKL073W	TFB3	Q03290	321 aa		2.57	□□□□□ -2
LHS1	YKL073W	TY1A-DR2	Q03964	440 aa	Known RBP	2.57	□□□□□ -2
LHS1	YKL073W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
LHS1	YKL073W	LEU1	P07264	779 aa	Known RBP	2.57	□□□□□ -2
LHS1	YKL073W	SWI5	P08153	709 aa		2.57	□□□□□ -2
LHS1	YKL073W	AMN1	P38285	549 aa	Predicted RBP	2.57	□□□□□ -2
LHS1	YKL073W	SLN1	P39928	1220 aa	Predicted RBP	2.57	□□□□□ -2
LHS1	YKL073W	LSB6	P42951	607 aa		2.57	□□□□□ -2
LHS1	YKL073W	BIO2	P32451	375 aa		2.56	□□□□□ -2
LHS1	YKL073W	TAT1	P38085	619 aa		2.56	□□□□□ -2
LHS1	YKL073W	YFL034W	P43564	1073 aa		2.56	□□□□□ -2
LHS1	YKL073W	ENO2	P00925	437 aa	Known RBP	2.56	□□□□□ -2
LHS1	YKL073W	MCM1	P11746	286 aa		2.56	□□□□□ -2
LHS1	YKL073W	PKC1	P24583	1151 aa		2.56	□□□□□ -2
LHS1	YKL073W	EBP2	P36049	427 aa	Known RBP	2.56	□□□□□ -2
LHS1	YKL073W	AIM9	P40053	627 aa	Known RBP	2.55	□□□□□ -2
LHS1	YKL073W	YNL108C	P53929	270 aa		2.55	□□□□□ -2
LHS1	YKL073W	MSC7	P38694	644 aa		2.55	□□□□□ -2
LHS1	YKL073W	YTA6	P40328	754 aa		2.55	□□□□□ -2
LHS1	YKL073W	RIM21	P48565	533 aa		2.55	□□□□□ -2
LHS1	YKL073W	MCA1	Q08601	432 aa		2.55	□□□□□ -2
LHS1	YKL073W	RPS6A	P0CX37	236 aa	Known RBP	2.55	□□□□□ -2
LHS1	YKL073W	RPS6B	P0CX38	236 aa	Predicted RBP	2.55	□□□□□ -2
LHS1	YKL073W	RGP1	P16664	663 aa		2.55	□□□□□ -2
LHS1	YKL073W	ALD2	P47771	506 aa		2.55	□□□□□ -2
LHS1	YKL073W	RDS2	P19541	446 aa	Known RBP	2.54	□□□□□ -2
LHS1	YKL073W	ORC1	P54784	914 aa	Predicted RBP	2.54	□□□□□ -2
LHS1	YKL073W	HEH2	Q03281	663 aa		2.54	□□□□□ -2
LHS1	YKL073W	NOP8	Q08287	484 aa	Predicted RBP	2.54	□□□□□ -2
LHS1	YKL073W	NTH2	P35172	780 aa		2.53	□□□□□ -2
LHS1	YKL073W	TPS3	P38426	1054 aa	Known RBP	2.53	□□□□□ -2
LHS1	YKL073W	YNL165W	P53891	406 aa		2.53	□□□□□ -2
LHS1	YKL073W	YPL034W	Q03083	165 aa		2.53	□□□□□ -2
LHS1	YKL073W	MON2	P48563	1636 aa	Predicted RBP	2.53	□□□□□ -2
LHS1	YKL073W	PRY1	P47032	299 aa		2.53	□□□□□ -2.01
LHS1	YKL073W	NHA1	Q99271	985 aa		2.53	□□□□□ -2.01
LHS1	YKL073W	MAC1	P35192	417 aa		2.52	□□□□□ -2.01
LHS1	YKL073W	TSC13	Q99190	310 aa		2.52	□□□□□ -2.01
LHS1	YKL073W	MLF3	P32047	452 aa		2.52	□□□□□ -2.01
LHS1	YKL073W	KRI1	P42846	591 aa	Known RBP	2.52	□□□□□ -2.01
LHS1	YKL073W	Q0182	Q9ZZW1	134 aa		2.52	□□□□□ -2.01
LHS1	YKL073W	ALG14	P38242	237 aa		2.51	□□□□□ -2.01
LHS1	YKL073W	BUD9	P53226	547 aa		2.51	□□□□□ -2.01
LHS1	YKL073W	MRX10	Q05648	414 aa		2.51	□□□□□ -2.01
LHS1	YKL073W	PDI1	P17967	522 aa	Known RBP	2.51	□□□□□ -2.01
LHS1	YKL073W	PGM2	P37012	569 aa	Known RBP	2.51	□□□□□ -2.01
LHS1	YKL073W	YJL007C	P47080	104 aa		2.51	□□□□□ -2.01
LHS1	YKL073W	SKP1	P52286	194 aa		2.51	□□□□□ -2.01
LHS1	YKL073W	CWC22	P53333	577 aa	Known RBP	2.51	□□□□□ -2.01
LHS1	YKL073W	UTP4	Q06679	776 aa	Known RBP	2.51	□□□□□ -2.01
LHS1	YKL073W	NCL1	P38205	684 aa	Known RBP	2.5	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms