RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C SLA1P32790 1244 aa6.05□□□□□ -1.44
ATG27YJL178C AIM9P40053 627 aaKnown RBP6.05□□□□□ -1.44
ATG27YJL178C NAM8Q00539 523 aaKnown RBP6.05□□□□□ -1.44
ATG27YJL178C TY1A-DR3Q12441 440 aa6.05□□□□□ -1.44
ATG27YJL178C SWI5P08153 709 aa6.04□□□□□ -1.44
ATG27YJL178C CPS1P27614 576 aa6.04□□□□□ -1.44
ATG27YJL178C KTR7P40504 517 aa6.04□□□□□ -1.44
ATG27YJL178C SUM1P46676 1062 aa6.04□□□□□ -1.44
ATG27YJL178C MSN5P52918 1224 aa6.04□□□□□ -1.44
ATG27YJL178C CCP1P00431 361 aa6.03□□□□□ -1.44
ATG27YJL178C PDI1P17967 522 aaKnown RBP6.03□□□□□ -1.44
ATG27YJL178C ROG3P43602 733 aa6.03□□□□□ -1.44
ATG27YJL178C TY1A-MR1Q04215 440 aa6.03□□□□□ -1.44
ATG27YJL178C TSC13Q99190 310 aa6.03□□□□□ -1.44
ATG27YJL178C ACS2P52910 683 aaKnown RBP6.02□□□□□ -1.45
ATG27YJL178C YPQ2Q06328 317 aa6.02□□□□□ -1.45
ATG27YJL178C RPS6AP0CX37 236 aaKnown RBP6.01□□□□□ -1.45
ATG27YJL178C RPS6BP0CX38 236 aaPredicted RBP6.01□□□□□ -1.45
ATG27YJL178C NTH2P35172 780 aa6.01□□□□□ -1.45
ATG27YJL178C YFL034WP43564 1073 aa6□□□□□ -1.45
ATG27YJL178C PHO87P25360 923 aa5.99□□□□□ -1.45
ATG27YJL178C TGL4P36165 910 aa5.99□□□□□ -1.45
ATG27YJL178C SHM1P37292 490 aaPredicted RBP5.99□□□□□ -1.45
ATG27YJL178C GAL2P13181 574 aa5.98□□□□□ -1.45
ATG27YJL178C JJJ2P46997 583 aa5.98□□□□□ -1.45
ATG27YJL178C HPF1Q05164 967 aa5.97□□□□□ -1.45
ATG27YJL178C RPS31P05759 152 aaKnown RBP5.96□□□□□ -1.46
ATG27YJL178C HAP4P14064 554 aa5.96□□□□□ -1.46
ATG27YJL178C AHP1P38013 176 aaKnown RBP5.96□□□□□ -1.46
ATG27YJL178C ALA1P40825 983 aaKnown RBP5.96□□□□□ -1.46
ATG27YJL178C UBP15P50101 1230 aa5.96□□□□□ -1.46
ATG27YJL178C ROM1P53046 1155 aa5.96□□□□□ -1.46
ATG27YJL178C SSA4P22202 642 aaKnown RBP5.95□□□□□ -1.46
ATG27YJL178C PUP1P25043 261 aa5.95□□□□□ -1.46
ATG27YJL178C IRE1P32361 1115 aa5.95□□□□□ -1.46
ATG27YJL178C YNL165WP53891 406 aa5.95□□□□□ -1.46
ATG27YJL178C SUB2Q07478 446 aaKnown RBP5.95□□□□□ -1.46
ATG27YJL178C GAS4Q08271 471 aa5.95□□□□□ -1.46
ATG27YJL178C CYT1P07143 309 aa5.94□□□□□ -1.46
ATG27YJL178C MCM1P11746 286 aa5.94□□□□□ -1.46
ATG27YJL178C CUZ1P53899 274 aa5.94□□□□□ -1.46
ATG27YJL178C ECM23Q02710 187 aa5.94□□□□□ -1.46
ATG27YJL178C UBP1P25037 809 aa5.93□□□□□ -1.46
ATG27YJL178C YGR035CP53222 116 aa5.93□□□□□ -1.46
ATG27YJL178C YML083CQ04526 418 aa5.93□□□□□ -1.46
ATG27YJL178C NOB1Q08444 459 aaKnown RBP5.93□□□□□ -1.46
ATG27YJL178C PSH1Q12161 406 aa5.93□□□□□ -1.46
ATG27YJL178C PDC6P26263 563 aaKnown RBP5.92□□□□□ -1.46
ATG27YJL178C MTC5Q03897 1148 aa5.92□□□□□ -1.46
ATG27YJL178C NGR1P32831 672 aaKnown RBP5.9□□□□□ -1.46
ATG27YJL178C DIT1P21623 536 aa5.89□□□□□ -1.47
ATG27YJL178C SUV3P32580 737 aa5.89□□□□□ -1.47
ATG27YJL178C UBX7P38349 436 aa5.89□□□□□ -1.47
ATG27YJL178C ALD2P47771 506 aa5.89□□□□□ -1.47
ATG27YJL178C LEU1P07264 779 aaKnown RBP5.88□□□□□ -1.47
ATG27YJL178C TRK2P28584 889 aa5.88□□□□□ -1.47
ATG27YJL178C HXT5P38695 592 aa5.88□□□□□ -1.47
ATG27YJL178C LYS5P50113 272 aa5.88□□□□□ -1.47
ATG27YJL178C YMR265CQ03508 461 aaKnown RBP5.88□□□□□ -1.47
ATG27YJL178C Q0182Q9ZZW1 134 aa5.88□□□□□ -1.47
ATG27YJL178C VAN1P23642 535 aa5.87□□□□□ -1.47
ATG27YJL178C MLF3P32047 452 aa5.87□□□□□ -1.47
ATG27YJL178C JJJ3P47138 172 aa5.87□□□□□ -1.47
ATG27YJL178C KRE33P53914 1056 aaKnown RBP5.86□□□□□ -1.47
ATG27YJL178C SYT1Q06836 1226 aa5.86□□□□□ -1.47
ATG27YJL178C DPH6Q12429 685 aa5.86□□□□□ -1.47
ATG27YJL178C MRPL16P38064 232 aa5.85□□□□□ -1.47
ATG27YJL178C CEM1P39525 442 aa5.85□□□□□ -1.47
ATG27YJL178C YDR461C-AQ2V2P7 80 aa5.85□□□□□ -1.47
ATG27YJL178C TRS33Q99394 268 aa5.84□□□□□ -1.47
ATG27YJL178C SSA1P10591 642 aaKnown RBP5.83□□□□□ -1.48
ATG27YJL178C SPR3P41901 512 aa5.83□□□□□ -1.48
ATG27YJL178C ADE12P80210 433 aaKnown RBP5.83□□□□□ -1.48
ATG27YJL178C CAB1Q04430 367 aa5.83□□□□□ -1.48
ATG27YJL178C UTP4Q06679 776 aaKnown RBP5.83□□□□□ -1.48
ATG27YJL178C STB3Q12427 513 aa5.83□□□□□ -1.48
ATG27YJL178C RGP1P16664 663 aa5.82□□□□□ -1.48
ATG27YJL178C SCD5P34758 872 aa5.82□□□□□ -1.48
ATG27YJL178C YTA6P40328 754 aa5.82□□□□□ -1.48
ATG27YJL178C CWH41P53008 833 aa5.82□□□□□ -1.48
ATG27YJL178C PUF6Q04373 656 aaKnown RBP5.82□□□□□ -1.48
ATG27YJL178C YBR197CP38306 217 aa5.8□□□□□ -1.48
ATG27YJL178C ALD4P46367 519 aaKnown RBP5.8□□□□□ -1.48
ATG27YJL178C CWC15Q03772 175 aaKnown RBP5.8□□□□□ -1.48
ATG27YJL178C FPS1P23900 669 aa5.79□□□□□ -1.48
ATG27YJL178C GEF1P37020 779 aa5.79□□□□□ -1.48
ATG27YJL178C TPS3P38426 1054 aaKnown RBP5.79□□□□□ -1.48
ATG27YJL178C MSC7P38694 644 aa5.79□□□□□ -1.48
ATG27YJL178C MTO1P53070 669 aa5.79□□□□□ -1.48
ATG27YJL178C RPL34AP87262 121 aaPredicted RBP5.79□□□□□ -1.48
ATG27YJL178C KAP122P32767 1081 aa5.78□□□□□ -1.48
ATG27YJL178C SKP1P52286 194 aa5.78□□□□□ -1.48
ATG27YJL178C PUN1Q06991 263 aa5.78□□□□□ -1.48
ATG27YJL178C MRPL33P20084 86 aa5.77□□□□□ -1.49
ATG27YJL178C FOX2Q02207 900 aaKnown RBP5.77□□□□□ -1.49
ATG27YJL178C TY1A-DR2Q03964 440 aaKnown RBP5.77□□□□□ -1.49
ATG27YJL178C GPM1P00950 247 aaKnown RBP5.76□□□□□ -1.49
ATG27YJL178C SRS2P12954 1174 aa5.76□□□□□ -1.49
ATG27YJL178C RPC31P17890 251 aa5.76□□□□□ -1.49
ATG27YJL178C NAB2P32505 525 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms