RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C YNL108CP53929 270 aa8.18□□□□□ -1.1
CTK2YJL006C UTP13Q05946 817 aaKnown RBP8.18□□□□□ -1.1
CTK2YJL006C THI72Q08579 599 aa8.18□□□□□ -1.1
CTK2YJL006C SUP45P12385 437 aaKnown RBP8.17□□□□□ -1.1
CTK2YJL006C ALA1P40825 983 aaKnown RBP8.17□□□□□ -1.1
CTK2YJL006C HDA3Q06623 655 aa8.17□□□□□ -1.1
CTK2YJL006C AI1P03875 834 aa8.16□□□□□ -1.1
CTK2YJL006C SUM1P46676 1062 aa8.16□□□□□ -1.1
CTK2YJL006C KRE33P53914 1056 aaKnown RBP8.16□□□□□ -1.1
CTK2YJL006C SYT1Q06836 1226 aa8.16□□□□□ -1.1
CTK2YJL006C ENO2P00925 437 aaKnown RBP8.15□□□□□ -1.1
CTK2YJL006C SLX8P40072 274 aa8.15□□□□□ -1.1
CTK2YJL006C LSB3P43603 459 aaKnown RBP8.15□□□□□ -1.1
CTK2YJL006C ADE12P80210 433 aaKnown RBP8.15□□□□□ -1.1
CTK2YJL006C YFL066CP43538 392 aa8.12□□□□□ -1.11
CTK2YJL006C JJJ2P46997 583 aa8.11□□□□□ -1.11
CTK2YJL006C YDR461C-AQ2V2P7 80 aa8.11□□□□□ -1.11
CTK2YJL006C IRE1P32361 1115 aa8.1□□□□□ -1.11
CTK2YJL006C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
CTK2YJL006C YJL007CP47080 104 aa8.09□□□□□ -1.11
CTK2YJL006C RIM21P48565 533 aa8.08□□□□□ -1.12
CTK2YJL006C SHM1P37292 490 aaPredicted RBP8.07□□□□□ -1.12
CTK2YJL006C SWI5P08153 709 aa8.04□□□□□ -1.12
CTK2YJL006C RDS2P19541 446 aaKnown RBP8.04□□□□□ -1.12
CTK2YJL006C SBE2P42223 864 aaKnown RBP8.03□□□□□ -1.12
CTK2YJL006C PSH1Q12161 406 aa8.03□□□□□ -1.12
CTK2YJL006C FPS1P23900 669 aa8.02□□□□□ -1.13
CTK2YJL006C PDC6P26263 563 aaKnown RBP8.02□□□□□ -1.13
CTK2YJL006C MRPL16P38064 232 aa8.02□□□□□ -1.13
CTK2YJL006C AIM9P40053 627 aaKnown RBP8.02□□□□□ -1.13
CTK2YJL006C YPQ2Q06328 317 aa8.01□□□□□ -1.13
CTK2YJL006C YPR053CQ6Q5F3 151 aa8.01□□□□□ -1.13
CTK2YJL006C RPS31P05759 152 aaKnown RBP8□□□□□ -1.13
CTK2YJL006C CCT8P47079 568 aaKnown RBP8□□□□□ -1.13
CTK2YJL006C TDA6Q06466 467 aa8□□□□□ -1.13
CTK2YJL006C GPM1P00950 247 aaKnown RBP7.98□□□□□ -1.13
CTK2YJL006C BIM1P40013 344 aa7.98□□□□□ -1.13
CTK2YJL006C YFL034WP43564 1073 aa7.98□□□□□ -1.13
CTK2YJL006C MRX10Q05648 414 aa7.98□□□□□ -1.13
CTK2YJL006C STB3Q12427 513 aa7.98□□□□□ -1.13
CTK2YJL006C RPS6AP0CX37 236 aaKnown RBP7.97□□□□□ -1.13
CTK2YJL006C RPS6BP0CX38 236 aaPredicted RBP7.97□□□□□ -1.13
CTK2YJL006C YNR014WP53719 212 aa7.97□□□□□ -1.13
CTK2YJL006C ENO1P00924 437 aaKnown RBP7.96□□□□□ -1.14
CTK2YJL006C NTH2P35172 780 aa7.96□□□□□ -1.14
CTK2YJL006C ATG32P40458 529 aa7.96□□□□□ -1.14
CTK2YJL006C YMR187CQ03236 431 aa7.96□□□□□ -1.14
CTK2YJL006C TIF1P10081 395 aaKnown RBP7.95□□□□□ -1.14
CTK2YJL006C RTG2P32608 588 aaKnown RBP7.95□□□□□ -1.14
CTK2YJL006C PDI1P17967 522 aaKnown RBP7.94□□□□□ -1.14
CTK2YJL006C SKN7P38889 622 aa7.94□□□□□ -1.14
CTK2YJL006C SPR3P41901 512 aa7.94□□□□□ -1.14
CTK2YJL006C LEU1P07264 779 aaKnown RBP7.92□□□□□ -1.14
CTK2YJL006C MCM1P11746 286 aa7.92□□□□□ -1.14
CTK2YJL006C RPL34BP40525 121 aaKnown RBP7.92□□□□□ -1.14
CTK2YJL006C HGH1P48362 394 aaKnown RBP7.92□□□□□ -1.14
CTK2YJL006C TSC13Q99190 310 aa7.92□□□□□ -1.14
CTK2YJL006C MCX1P38323 520 aaPredicted RBP7.91□□□□□ -1.14
CTK2YJL006C BOI2P39969 1040 aa7.91□□□□□ -1.14
CTK2YJL006C YNL165WP53891 406 aa7.91□□□□□ -1.14
CTK2YJL006C PDC5P16467 563 aaKnown RBP7.89□□□□□ -1.15
CTK2YJL006C YTA6P40328 754 aa7.89□□□□□ -1.15
CTK2YJL006C ALD2P47771 506 aa7.89□□□□□ -1.15
CTK2YJL006C TY1A-DR2Q03964 440 aaKnown RBP7.89□□□□□ -1.15
CTK2YJL006C KNS1P32350 737 aaPredicted RBP7.88□□□□□ -1.15
CTK2YJL006C PEP12P32854 288 aa7.87□□□□□ -1.15
CTK2YJL006C MET1P36150 593 aa7.87□□□□□ -1.15
CTK2YJL006C Q0182Q9ZZW1 134 aa7.87□□□□□ -1.15
CTK2YJL006C RGP1P16664 663 aa7.86□□□□□ -1.15
CTK2YJL006C MLF3P32047 452 aa7.86□□□□□ -1.15
CTK2YJL006C RPP1AP05318 106 aaPredicted RBP7.85□□□□□ -1.15
CTK2YJL006C CYT1P07143 309 aa7.85□□□□□ -1.15
CTK2YJL006C SBP1P10080 294 aaKnown RBP7.85□□□□□ -1.15
CTK2YJL006C YCK2P23292 546 aaKnown RBP7.85□□□□□ -1.15
CTK2YJL006C MSC7P38694 644 aa7.84□□□□□ -1.15
CTK2YJL006C KTR7P40504 517 aa7.83□□□□□ -1.16
CTK2YJL006C NRD1P53617 575 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
CTK2YJL006C SLN1P39928 1220 aaPredicted RBP7.82□□□□□ -1.16
CTK2YJL006C ACS2P52910 683 aaKnown RBP7.82□□□□□ -1.16
CTK2YJL006C YDR215CQ12240 137 aa7.82□□□□□ -1.16
CTK2YJL006C PHO87P25360 923 aa7.8□□□□□ -1.16
CTK2YJL006C MTO1P53070 669 aa7.79□□□□□ -1.16
CTK2YJL006C HAP4P14064 554 aa7.77□□□□□ -1.17
CTK2YJL006C MCA1Q08601 432 aa7.76□□□□□ -1.17
CTK2YJL006C TAT1P38085 619 aa7.75□□□□□ -1.17
CTK2YJL006C AMN1P38285 549 aaPredicted RBP7.75□□□□□ -1.17
CTK2YJL006C HEH2Q03281 663 aa7.75□□□□□ -1.17
CTK2YJL006C GAS4Q08271 471 aa7.75□□□□□ -1.17
CTK2YJL006C UBP1P25037 809 aa7.74□□□□□ -1.17
CTK2YJL006C LSB6P42951 607 aa7.74□□□□□ -1.17
CTK2YJL006C UTP4Q06679 776 aaKnown RBP7.74□□□□□ -1.17
CTK2YJL006C PRY1P47032 299 aa7.73□□□□□ -1.17
CTK2YJL006C SCD5P34758 872 aa7.72□□□□□ -1.17
CTK2YJL006C NCL1P38205 684 aaKnown RBP7.72□□□□□ -1.17
CTK2YJL006C PRK1P40494 810 aa7.72□□□□□ -1.17
CTK2YJL006C SKP1P52286 194 aa7.72□□□□□ -1.17
CTK2YJL006C KAP122P32767 1081 aa7.71□□□□□ -1.18
CTK2YJL006C NGR1P32831 672 aaKnown RBP7.71□□□□□ -1.18
CTK2YJL006C SIS2P36024 562 aa7.71□□□□□ -1.18
CTK2YJL006C HXT5P38695 592 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms