RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
VHR1	YIL056W	NOB1	Q08444	459 aa	Known RBP	5.41	□□□□□ -1.54
VHR1	YIL056W	SWI5	P08153	709 aa		5.4	□□□□□ -1.54
VHR1	YIL056W	SLX8	P40072	274 aa		5.4	□□□□□ -1.54
VHR1	YIL056W	CYT1	P07143	309 aa		5.4	□□□□□ -1.55
VHR1	YIL056W	CWH41	P53008	833 aa		5.4	□□□□□ -1.55
VHR1	YIL056W	GAR1	P28007	205 aa	Known RBP	5.38	□□□□□ -1.55
VHR1	YIL056W	TRS33	Q99394	268 aa		5.38	□□□□□ -1.55
VHR1	YIL056W	AHP1	P38013	176 aa	Known RBP	5.37	□□□□□ -1.55
VHR1	YIL056W	SUM1	P46676	1062 aa		5.37	□□□□□ -1.55
VHR1	YIL056W	ROM1	P53046	1155 aa		5.37	□□□□□ -1.55
VHR1	YIL056W	UBP2	Q01476	1272 aa		5.37	□□□□□ -1.55
VHR1	YIL056W	PUN1	Q06991	263 aa		5.37	□□□□□ -1.55
VHR1	YIL056W	GEF1	P37020	779 aa		5.36	□□□□□ -1.55
VHR1	YIL056W	TCB1	Q12466	1186 aa		5.36	□□□□□ -1.55
VHR1	YIL056W	YJR098C	P47139	656 aa		5.36	□□□□□ -1.55
VHR1	YIL056W	YDR444W	Q04093	687 aa		5.36	□□□□□ -1.55
VHR1	YIL056W	OPT2	Q06593	877 aa		5.35	□□□□□ -1.55
VHR1	YIL056W	MET22	P32179	357 aa		5.35	□□□□□ -1.55
VHR1	YIL056W	PUF6	Q04373	656 aa	Known RBP	5.35	□□□□□ -1.55
VHR1	YIL056W	SCW11	P53189	542 aa		5.34	□□□□□ -1.55
VHR1	YIL056W	YTA6	P40328	754 aa		5.33	□□□□□ -1.56
VHR1	YIL056W	RGA1	P39083	1007 aa		5.32	□□□□□ -1.56
VHR1	YIL056W	FOX2	Q02207	900 aa	Known RBP	5.31	□□□□□ -1.56
VHR1	YIL056W	LCB5	Q06147	687 aa	Known RBP	5.31	□□□□□ -1.56
VHR1	YIL056W	CDC3	P32457	520 aa	Known RBP	5.31	□□□□□ -1.56
VHR1	YIL056W	MSN5	P52918	1224 aa		5.31	□□□□□ -1.56
VHR1	YIL056W	RRN6	P32786	894 aa		5.3	□□□□□ -1.56
VHR1	YIL056W	GLY1	P37303	387 aa	Known RBP	5.3	□□□□□ -1.56
VHR1	YIL056W	SSN3	P39073	555 aa		5.3	□□□□□ -1.56
VHR1	YIL056W	MCM1	P11746	286 aa		5.29	□□□□□ -1.56
VHR1	YIL056W	SRS2	P12954	1174 aa		5.29	□□□□□ -1.56
VHR1	YIL056W	UBP1	P25037	809 aa		5.29	□□□□□ -1.56
VHR1	YIL056W	DAL1	P32375	460 aa		5.29	□□□□□ -1.56
VHR1	YIL056W	NGR1	P32831	672 aa	Known RBP	5.29	□□□□□ -1.56
VHR1	YIL056W	PNP1	Q05788	311 aa		5.29	□□□□□ -1.56
VHR1	YIL056W	Q0182	Q9ZZW1	134 aa		5.29	□□□□□ -1.56
VHR1	YIL056W	FUR4	P05316	633 aa	Known RBP	5.29	□□□□□ -1.56
VHR1	YIL056W	ALD4	P46367	519 aa	Known RBP	5.29	□□□□□ -1.56
VHR1	YIL056W	JJJ2	P46997	583 aa		5.29	□□□□□ -1.56
VHR1	YIL056W	IRE1	P32361	1115 aa		5.28	□□□□□ -1.56
VHR1	YIL056W	KAR5	Q04746	504 aa		5.28	□□□□□ -1.56
VHR1	YIL056W	OSH7	P38755	437 aa		5.27	□□□□□ -1.57
VHR1	YIL056W	YPQ2	Q06328	317 aa		5.27	□□□□□ -1.57
VHR1	YIL056W	SCD5	P34758	872 aa		5.27	□□□□□ -1.57
VHR1	YIL056W	VTC4	P47075	721 aa		5.27	□□□□□ -1.57
VHR1	YIL056W	CWC15	Q03772	175 aa	Known RBP	5.27	□□□□□ -1.57
VHR1	YIL056W	CAF120	P53836	1060 aa		5.26	□□□□□ -1.57
VHR1	YIL056W	UBP15	P50101	1230 aa		5.25	□□□□□ -1.57
VHR1	YIL056W	TY1A-BL	Q12266	440 aa		5.25	□□□□□ -1.57
VHR1	YIL056W	HAT1	Q12341	374 aa		5.25	□□□□□ -1.57
VHR1	YIL056W	MLF3	P32047	452 aa		5.25	□□□□□ -1.57
VHR1	YIL056W	ISC10	P32645	267 aa		5.25	□□□□□ -1.57
VHR1	YIL056W	MTO1	P53070	669 aa		5.25	□□□□□ -1.57
VHR1	YIL056W	CDC19	P00549	500 aa	Known RBP	5.23	□□□□□ -1.57
VHR1	YIL056W	SUV3	P32580	737 aa		5.23	□□□□□ -1.57
VHR1	YIL056W	TPS3	P38426	1054 aa	Known RBP	5.23	□□□□□ -1.57
VHR1	YIL056W	YBR197C	P38306	217 aa		5.23	□□□□□ -1.57
VHR1	YIL056W	PDC6	P26263	563 aa	Known RBP	5.22	□□□□□ -1.57
VHR1	YIL056W	SLA1	P32790	1244 aa		5.22	□□□□□ -1.57
VHR1	YIL056W	SHM1	P37292	490 aa	Predicted RBP	5.22	□□□□□ -1.57
VHR1	YIL056W	GLO3	P38682	493 aa	Known RBP	5.22	□□□□□ -1.57
VHR1	YIL056W	YNL165W	P53891	406 aa		5.22	□□□□□ -1.57
VHR1	YIL056W	YMR265C	Q03508	461 aa	Known RBP	5.22	□□□□□ -1.57
VHR1	YIL056W	TY1A-DR3	Q12441	440 aa		5.22	□□□□□ -1.57
VHR1	YIL056W	ROG3	P43602	733 aa		5.21	□□□□□ -1.57
VHR1	YIL056W	YIR007W	P40566	764 aa		5.21	□□□□□ -1.58
VHR1	YIL056W	CAB1	Q04430	367 aa		5.21	□□□□□ -1.58
VHR1	YIL056W	PSH1	Q12161	406 aa		5.21	□□□□□ -1.58
VHR1	YIL056W	STB3	Q12427	513 aa		5.21	□□□□□ -1.58
VHR1	YIL056W	LDH1	P38139	375 aa		5.2	□□□□□ -1.58
VHR1	YIL056W	HXT5	P38695	592 aa		5.2	□□□□□ -1.58
VHR1	YIL056W	QDR2	P40474	542 aa		5.2	□□□□□ -1.58
VHR1	YIL056W	SUT1	P53032	299 aa	Known RBP	5.2	□□□□□ -1.58
VHR1	YIL056W	MRPL33	P20084	86 aa		5.19	□□□□□ -1.58
VHR1	YIL056W	KAP122	P32767	1081 aa		5.19	□□□□□ -1.58
VHR1	YIL056W	MRPL16	P38064	232 aa		5.19	□□□□□ -1.58
VHR1	YIL056W	GRS1	P38088	690 aa	Known RBP	5.19	□□□□□ -1.58
VHR1	YIL056W	TY1A-MR1	Q04215	440 aa		5.19	□□□□□ -1.58
VHR1	YIL056W	UTP4	Q06679	776 aa	Known RBP	5.19	□□□□□ -1.58
VHR1	YIL056W	RPS31	P05759	152 aa	Known RBP	5.19	□□□□□ -1.58
VHR1	YIL056W	DYS1	P38791	387 aa		5.19	□□□□□ -1.58
VHR1	YIL056W	FIR1	P40020	876 aa		5.19	□□□□□ -1.58
VHR1	YIL056W	YBL113C	Q7M4S9	792 aa		5.19	□□□□□ -1.58
VHR1	YIL056W	RPP1A	P05318	106 aa	Predicted RBP	5.18	□□□□□ -1.58
VHR1	YIL056W	VMA3	P25515	160 aa		5.18	□□□□□ -1.58
VHR1	YIL056W	CEM1	P39525	442 aa		5.18	□□□□□ -1.58
VHR1	YIL056W	ACO2	P39533	789 aa		5.18	□□□□□ -1.58
VHR1	YIL056W	BOL3	P39724	118 aa		5.18	□□□□□ -1.58
VHR1	YIL056W	KRE33	P53914	1056 aa	Known RBP	5.18	□□□□□ -1.58
VHR1	YIL056W	NAM8	Q00539	523 aa	Known RBP	5.18	□□□□□ -1.58
VHR1	YIL056W	SLD2	P34252	453 aa		5.17	□□□□□ -1.58
VHR1	YIL056W	YBR287W	P38355	427 aa		5.17	□□□□□ -1.58
VHR1	YIL056W	QDR1	P40475	563 aa		5.17	□□□□□ -1.58
VHR1	YIL056W	CUZ1	P53899	274 aa		5.17	□□□□□ -1.58
VHR1	YIL056W	LEU1	P07264	779 aa	Known RBP	5.16	□□□□□ -1.58
VHR1	YIL056W	RGP1	P16664	663 aa		5.16	□□□□□ -1.58
VHR1	YIL056W	FPS1	P23900	669 aa		5.16	□□□□□ -1.58
VHR1	YIL056W	ADE12	P80210	433 aa	Known RBP	5.16	□□□□□ -1.58
VHR1	YIL056W	DIT1	P21623	536 aa		5.15	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms