RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A TRK2P28584 889 aa6.83□□□□□ -1.32
EFG1YGR271C-A PEP12P32854 288 aa6.83□□□□□ -1.32
EFG1YGR271C-A JJJ3P47138 172 aa6.83□□□□□ -1.32
EFG1YGR271C-A DPH6Q12429 685 aa6.83□□□□□ -1.32
EFG1YGR271C-A LYS5P50113 272 aa6.82□□□□□ -1.32
EFG1YGR271C-A YPQ2Q06328 317 aa6.81□□□□□ -1.32
EFG1YGR271C-A CUZ1P53899 274 aa6.79□□□□□ -1.32
EFG1YGR271C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
EFG1YGR271C-A RTG2P32608 588 aaKnown RBP6.78□□□□□ -1.32
EFG1YGR271C-A AHP1P38013 176 aaKnown RBP6.78□□□□□ -1.32
EFG1YGR271C-A AIM9P40053 627 aaKnown RBP6.78□□□□□ -1.32
EFG1YGR271C-A UTP7P40055 554 aaKnown RBP6.78□□□□□ -1.32
EFG1YGR271C-A JJJ2P46997 583 aa6.78□□□□□ -1.32
EFG1YGR271C-A SWI5P08153 709 aa6.77□□□□□ -1.33
EFG1YGR271C-A SHM1P37292 490 aaPredicted RBP6.77□□□□□ -1.33
EFG1YGR271C-A RPL34BP40525 121 aaKnown RBP6.77□□□□□ -1.33
EFG1YGR271C-A MCM1P11746 286 aa6.76□□□□□ -1.33
EFG1YGR271C-A SIS2P36024 562 aa6.76□□□□□ -1.33
EFG1YGR271C-A YFL034WP43564 1073 aa6.76□□□□□ -1.33
EFG1YGR271C-A YPR204WQ08995 1032 aa6.76□□□□□ -1.33
EFG1YGR271C-A YDR461C-AQ2V2P7 80 aa6.75□□□□□ -1.33
EFG1YGR271C-A DIT1P21623 536 aa6.74□□□□□ -1.33
EFG1YGR271C-A TSC13Q99190 310 aa6.74□□□□□ -1.33
EFG1YGR271C-A RPS6AP0CX37 236 aaKnown RBP6.73□□□□□ -1.33
EFG1YGR271C-A RPS6BP0CX38 236 aaPredicted RBP6.73□□□□□ -1.33
EFG1YGR271C-A IRE1P32361 1115 aa6.73□□□□□ -1.33
EFG1YGR271C-A SYT1Q06836 1226 aa6.73□□□□□ -1.33
EFG1YGR271C-A RPS31P05759 152 aaKnown RBP6.72□□□□□ -1.33
EFG1YGR271C-A PSH1Q12161 406 aa6.72□□□□□ -1.33
EFG1YGR271C-A PDC6P26263 563 aaKnown RBP6.71□□□□□ -1.34
EFG1YGR271C-A CEM1P39525 442 aa6.71□□□□□ -1.34
EFG1YGR271C-A DMA2P53924 522 aa6.71□□□□□ -1.34
EFG1YGR271C-A UBP1P25037 809 aa6.7□□□□□ -1.34
EFG1YGR271C-A ALA1P40825 983 aaKnown RBP6.7□□□□□ -1.34
EFG1YGR271C-A YMR265CQ03508 461 aaKnown RBP6.7□□□□□ -1.34
EFG1YGR271C-A PHO87P25360 923 aa6.69□□□□□ -1.34
EFG1YGR271C-A NTH2P35172 780 aa6.69□□□□□ -1.34
EFG1YGR271C-A LEU1P07264 779 aaKnown RBP6.68□□□□□ -1.34
EFG1YGR271C-A PDI1P17967 522 aaKnown RBP6.67□□□□□ -1.34
EFG1YGR271C-A ACS2P52910 683 aaKnown RBP6.67□□□□□ -1.34
EFG1YGR271C-A GAS4Q08271 471 aa6.67□□□□□ -1.34
EFG1YGR271C-A CYT1P07143 309 aa6.66□□□□□ -1.34
EFG1YGR271C-A ALD2P47771 506 aa6.66□□□□□ -1.34
EFG1YGR271C-A YNL165WP53891 406 aa6.66□□□□□ -1.34
EFG1YGR271C-A KRE33P53914 1056 aaKnown RBP6.66□□□□□ -1.34
EFG1YGR271C-A HAP4P14064 554 aa6.65□□□□□ -1.34
EFG1YGR271C-A TTI1P36097 1038 aa6.65□□□□□ -1.34
EFG1YGR271C-A YFL066CP43538 392 aa6.65□□□□□ -1.34
EFG1YGR271C-A PHM7Q12252 991 aa6.65□□□□□ -1.34
EFG1YGR271C-A GAL2P13181 574 aa6.64□□□□□ -1.35
EFG1YGR271C-A UTP4Q06679 776 aaKnown RBP6.64□□□□□ -1.35
EFG1YGR271C-A ICP55P40051 511 aa6.63□□□□□ -1.35
EFG1YGR271C-A ADE12P80210 433 aaKnown RBP6.63□□□□□ -1.35
EFG1YGR271C-A AI1P03875 834 aa6.62□□□□□ -1.35
EFG1YGR271C-A SPR3P41901 512 aa6.62□□□□□ -1.35
EFG1YGR271C-A ROM1P53046 1155 aa6.62□□□□□ -1.35
EFG1YGR271C-A MTC5Q03897 1148 aa6.62□□□□□ -1.35
EFG1YGR271C-A MRPL16P38064 232 aa6.61□□□□□ -1.35
EFG1YGR271C-A STB3Q12427 513 aa6.61□□□□□ -1.35
EFG1YGR271C-A GPM1P00950 247 aaKnown RBP6.6□□□□□ -1.35
EFG1YGR271C-A MLF3P32047 452 aa6.6□□□□□ -1.35
EFG1YGR271C-A NGR1P32831 672 aaKnown RBP6.6□□□□□ -1.35
EFG1YGR271C-A TGL4P36165 910 aa6.6□□□□□ -1.35
EFG1YGR271C-A HXT5P38695 592 aa6.6□□□□□ -1.35
EFG1YGR271C-A KTR7P40504 517 aa6.6□□□□□ -1.35
EFG1YGR271C-A RGP1P16664 663 aa6.59□□□□□ -1.35
EFG1YGR271C-A FPS1P23900 669 aa6.59□□□□□ -1.35
EFG1YGR271C-A RPP1AP05318 106 aaPredicted RBP6.58□□□□□ -1.36
EFG1YGR271C-A SCD5P34758 872 aa6.58□□□□□ -1.36
EFG1YGR271C-A MDJ1P35191 511 aa6.58□□□□□ -1.36
EFG1YGR271C-A MSC7P38694 644 aa6.58□□□□□ -1.36
EFG1YGR271C-A YTA6P40328 754 aa6.58□□□□□ -1.36
EFG1YGR271C-A NSG2P53898 299 aa6.58□□□□□ -1.36
EFG1YGR271C-A PUS1Q12211 544 aaKnown RBP6.58□□□□□ -1.36
EFG1YGR271C-A SKP1P52286 194 aa6.57□□□□□ -1.36
EFG1YGR271C-A TY1A-DR2Q03964 440 aaKnown RBP6.57□□□□□ -1.36
EFG1YGR271C-A Q0182Q9ZZW1 134 aa6.57□□□□□ -1.36
EFG1YGR271C-A KNS1P32350 737 aaPredicted RBP6.55□□□□□ -1.36
EFG1YGR271C-A PDC5P16467 563 aaKnown RBP6.54□□□□□ -1.36
EFG1YGR271C-A THI72Q08579 599 aa6.54□□□□□ -1.36
EFG1YGR271C-A VAN1P23642 535 aa6.53□□□□□ -1.36
EFG1YGR271C-A PUP1P25043 261 aa6.53□□□□□ -1.36
EFG1YGR271C-A SUV3P32580 737 aa6.53□□□□□ -1.36
EFG1YGR271C-A SBE2P42223 864 aaKnown RBP6.53□□□□□ -1.36
EFG1YGR271C-A RPC31P17890 251 aa6.52□□□□□ -1.37
EFG1YGR271C-A CAB1Q04430 367 aa6.52□□□□□ -1.37
EFG1YGR271C-A TRS33Q99394 268 aa6.52□□□□□ -1.37
EFG1YGR271C-A CPS1P27614 576 aa6.51□□□□□ -1.37
EFG1YGR271C-A MCX1P38323 520 aaPredicted RBP6.51□□□□□ -1.37
EFG1YGR271C-A ECM23Q02710 187 aa6.51□□□□□ -1.37
EFG1YGR271C-A HEH2Q03281 663 aa6.51□□□□□ -1.37
EFG1YGR271C-A KAP122P32767 1081 aa6.5□□□□□ -1.37
EFG1YGR271C-A TDA6Q06466 467 aa6.5□□□□□ -1.37
EFG1YGR271C-A YPR053CQ6Q5F3 151 aa6.5□□□□□ -1.37
EFG1YGR271C-A SKN7P38889 622 aa6.49□□□□□ -1.37
EFG1YGR271C-A CCT8P47079 568 aaKnown RBP6.48□□□□□ -1.37
EFG1YGR271C-A MTO1P53070 669 aa6.48□□□□□ -1.37
EFG1YGR271C-A CUS1Q02554 436 aaPredicted RBP6.48□□□□□ -1.37
EFG1YGR271C-A UBX7P38349 436 aa6.47□□□□□ -1.37
EFG1YGR271C-A PRK1P40494 810 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms