RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeastyeast

Gene SKI6, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI6YGR195W NAF1P53919 492 aaKnown RBP8.11□□□□□ -1.11
SKI6YGR195W UTR2P32623 467 aa8.1□□□□□ -1.11
SKI6YGR195W MSN5P52918 1224 aa8.09□□□□□ -1.11
SKI6YGR195W YDJ1P25491 409 aaKnown RBP8.08□□□□□ -1.12
SKI6YGR195W MCM16Q12262 181 aa8.07□□□□□ -1.12
SKI6YGR195W RPP2BP02400 110 aaKnown RBP8.06□□□□□ -1.12
SKI6YGR195W SBP1P10080 294 aaKnown RBP8.06□□□□□ -1.12
SKI6YGR195W AHP1P38013 176 aaKnown RBP8.06□□□□□ -1.12
SKI6YGR195W YMR187CQ03236 431 aa8.06□□□□□ -1.12
SKI6YGR195W APL6P46682 809 aa8.05□□□□□ -1.12
SKI6YGR195W YNR014WP53719 212 aa8.05□□□□□ -1.12
SKI6YGR195W ALA1P40825 983 aaKnown RBP8.04□□□□□ -1.12
SKI6YGR195W YJL007CP47080 104 aa8.04□□□□□ -1.12
SKI6YGR195W YDR461C-AQ2V2P7 80 aa8.04□□□□□ -1.12
SKI6YGR195W SPT2P06843 333 aaPredicted RBP8.03□□□□□ -1.12
SKI6YGR195W SPT5P27692 1063 aaKnown RBP8.03□□□□□ -1.12
SKI6YGR195W SKN7P38889 622 aa8.03□□□□□ -1.12
SKI6YGR195W SHM1P37292 490 aaPredicted RBP8.02□□□□□ -1.13
SKI6YGR195W BIO2P32451 375 aa8.01□□□□□ -1.13
SKI6YGR195W BIM1P40013 344 aa8.01□□□□□ -1.13
SKI6YGR195W YCK2P23292 546 aaKnown RBP8□□□□□ -1.13
SKI6YGR195W SUP45P12385 437 aaKnown RBP7.99□□□□□ -1.13
SKI6YGR195W TBS1P38114 1094 aa7.99□□□□□ -1.13
SKI6YGR195W SOH1P38633 127 aa7.99□□□□□ -1.13
SKI6YGR195W JJJ2P46997 583 aa7.99□□□□□ -1.13
SKI6YGR195W RLF2Q12495 606 aa7.99□□□□□ -1.13
SKI6YGR195W SLN1P39928 1220 aaPredicted RBP7.98□□□□□ -1.13
SKI6YGR195W ATG32P40458 529 aa7.98□□□□□ -1.13
SKI6YGR195W SUM1P46676 1062 aa7.98□□□□□ -1.13
SKI6YGR195W AIM44Q99299 758 aa7.98□□□□□ -1.13
SKI6YGR195W GPM1P00950 247 aaKnown RBP7.97□□□□□ -1.13
SKI6YGR195W IRE1P32361 1115 aa7.97□□□□□ -1.13
SKI6YGR195W YNL108CP53929 270 aa7.97□□□□□ -1.13
SKI6YGR195W SLX8P40072 274 aa7.96□□□□□ -1.14
SKI6YGR195W MCA1Q08601 432 aa7.96□□□□□ -1.14
SKI6YGR195W FPS1P23900 669 aa7.95□□□□□ -1.14
SKI6YGR195W MRPL16P38064 232 aa7.95□□□□□ -1.14
SKI6YGR195W BOI2P39969 1040 aa7.95□□□□□ -1.14
SKI6YGR195W HDA3Q06623 655 aa7.95□□□□□ -1.14
SKI6YGR195W GLT1Q12680 2145 aaKnown RBP7.95□□□□□ -1.14
SKI6YGR195W TIF1P10081 395 aaKnown RBP7.94□□□□□ -1.14
SKI6YGR195W MRX12P47084 519 aa7.94□□□□□ -1.14
SKI6YGR195W PSH1Q12161 406 aa7.94□□□□□ -1.14
SKI6YGR195W ENO2P00925 437 aaKnown RBP7.93□□□□□ -1.14
SKI6YGR195W MCX1P38323 520 aaPredicted RBP7.92□□□□□ -1.14
SKI6YGR195W RPL34BP40525 121 aaKnown RBP7.92□□□□□ -1.14
SKI6YGR195W YDR215CQ12240 137 aa7.92□□□□□ -1.14
SKI6YGR195W STB3Q12427 513 aa7.92□□□□□ -1.14
SKI6YGR195W PDC6P26263 563 aaKnown RBP7.91□□□□□ -1.14
SKI6YGR195W YPP1P46951 817 aa7.91□□□□□ -1.14
SKI6YGR195W RTG2P32608 588 aaKnown RBP7.89□□□□□ -1.15
SKI6YGR195W RIM21P48565 533 aa7.88□□□□□ -1.15
SKI6YGR195W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
SKI6YGR195W RPS31P05759 152 aaKnown RBP7.87□□□□□ -1.15
SKI6YGR195W AMN1P38285 549 aaPredicted RBP7.87□□□□□ -1.15
SKI6YGR195W PRY1P47032 299 aa7.86□□□□□ -1.15
SKI6YGR195W MRX10Q05648 414 aa7.86□□□□□ -1.15
SKI6YGR195W PDC5P16467 563 aaKnown RBP7.84□□□□□ -1.15
SKI6YGR195W ENO1P00924 437 aaKnown RBP7.83□□□□□ -1.16
SKI6YGR195W SPR3P41901 512 aa7.83□□□□□ -1.16
SKI6YGR195W YNL165WP53891 406 aa7.83□□□□□ -1.16
SKI6YGR195W TY1A-DR2Q03964 440 aaKnown RBP7.83□□□□□ -1.16
SKI6YGR195W LSB6P42951 607 aa7.82□□□□□ -1.16
SKI6YGR195W SWI5P08153 709 aa7.81□□□□□ -1.16
SKI6YGR195W RDS2P19541 446 aaKnown RBP7.81□□□□□ -1.16
SKI6YGR195W TAT1P38085 619 aa7.8□□□□□ -1.16
SKI6YGR195W ATG3P40344 310 aa7.8□□□□□ -1.16
SKI6YGR195W UTP13Q05946 817 aaKnown RBP7.8□□□□□ -1.16
SKI6YGR195W YPQ2Q06328 317 aa7.8□□□□□ -1.16
SKI6YGR195W KNS1P32350 737 aaPredicted RBP7.79□□□□□ -1.16
SKI6YGR195W ALD2P47771 506 aa7.78□□□□□ -1.16
SKI6YGR195W MET1P36150 593 aa7.77□□□□□ -1.17
SKI6YGR195W MSC7P38694 644 aa7.77□□□□□ -1.17
SKI6YGR195W PEP12P32854 288 aa7.76□□□□□ -1.17
SKI6YGR195W AIM9P40053 627 aaKnown RBP7.76□□□□□ -1.17
SKI6YGR195W TTI1P36097 1038 aa7.75□□□□□ -1.17
SKI6YGR195W NAP1P25293 417 aaKnown RBP7.74□□□□□ -1.17
SKI6YGR195W SIS2P36024 562 aa7.74□□□□□ -1.17
SKI6YGR195W LEU1P07264 779 aaKnown RBP7.73□□□□□ -1.17
SKI6YGR195W RPS6AP0CX37 236 aaKnown RBP7.73□□□□□ -1.17
SKI6YGR195W RPS6BP0CX38 236 aaPredicted RBP7.73□□□□□ -1.17
SKI6YGR195W MLF3P32047 452 aa7.71□□□□□ -1.18
SKI6YGR195W ALO1P54783 526 aaKnown RBP7.71□□□□□ -1.18
SKI6YGR195W NTH2P35172 780 aa7.7□□□□□ -1.18
SKI6YGR195W MAC1P35192 417 aa7.7□□□□□ -1.18
SKI6YGR195W RGP1P16664 663 aa7.69□□□□□ -1.18
SKI6YGR195W Q0182Q9ZZW1 134 aa7.69□□□□□ -1.18
SKI6YGR195W CPS1P27614 576 aa7.68□□□□□ -1.18
SKI6YGR195W YPL034WQ03083 165 aa7.68□□□□□ -1.18
SKI6YGR195W PDI1P17967 522 aaKnown RBP7.67□□□□□ -1.18
SKI6YGR195W SSA4P22202 642 aaKnown RBP7.65□□□□□ -1.18
SKI6YGR195W PGM2P37012 569 aaKnown RBP7.65□□□□□ -1.18
SKI6YGR195W KTR7P40504 517 aa7.65□□□□□ -1.18
SKI6YGR195W TGL4P36165 910 aa7.64□□□□□ -1.19
SKI6YGR195W ALG14P38242 237 aa7.64□□□□□ -1.19
SKI6YGR195W YTA6P40328 754 aa7.64□□□□□ -1.19
SKI6YGR195W GAS5Q08193 484 aa7.63□□□□□ -1.19
SKI6YGR195W TSC13Q99190 310 aa7.63□□□□□ -1.19
SKI6YGR195W GAL2P13181 574 aa7.62□□□□□ -1.19
SKI6YGR195W YFL034WP43564 1073 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms