RNA–Protein interactions for RNA: YGR166W

TRS65, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS65, Length 1,683 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS65	YGR166W	GLC3	P32775	704 aa		4.49	□□□□□ -1.69
TRS65	YGR166W	UTP7	P40055	554 aa	Known RBP	4.49	□□□□□ -1.69
TRS65	YGR166W	ALA1	P40825	983 aa	Known RBP	4.49	□□□□□ -1.69
TRS65	YGR166W	KNS1	P32350	737 aa	Predicted RBP	4.48	□□□□□ -1.69
TRS65	YGR166W	STE20	Q03497	939 aa	Known RBP	4.48	□□□□□ -1.69
TRS65	YGR166W	UTR2	P32623	467 aa		4.48	□□□□□ -1.69
TRS65	YGR166W	CSN12	P47130	423 aa		4.48	□□□□□ -1.69
TRS65	YGR166W	MRPL16	P38064	232 aa		4.46	□□□□□ -1.7
TRS65	YGR166W	TBS1	P38114	1094 aa		4.46	□□□□□ -1.7
TRS65	YGR166W	IRE1	P32361	1115 aa		4.45	□□□□□ -1.7
TRS65	YGR166W	ISR1	Q06098	443 aa	Known RBP	4.45	□□□□□ -1.7
TRS65	YGR166W	SPT2	P06843	333 aa	Predicted RBP	4.45	□□□□□ -1.7
TRS65	YGR166W	INP52	P50942	1183 aa		4.45	□□□□□ -1.7
TRS65	YGR166W	FRA1	Q07825	749 aa		4.45	□□□□□ -1.7
TRS65	YGR166W	STB3	Q12427	513 aa		4.45	□□□□□ -1.7
TRS65	YGR166W	MAK16	P10962	306 aa	Predicted RBP	4.44	□□□□□ -1.7
TRS65	YGR166W	JJJ2	P46997	583 aa		4.44	□□□□□ -1.7
TRS65	YGR166W	YNR021W	P53723	404 aa	Known RBP	4.44	□□□□□ -1.7
TRS65	YGR166W	SUM1	P46676	1062 aa		4.42	□□□□□ -1.7
TRS65	YGR166W	AVT1	P47082	602 aa		4.42	□□□□□ -1.7
TRS65	YGR166W	TY1A-DR2	Q03964	440 aa	Known RBP	4.42	□□□□□ -1.7
TRS65	YGR166W	SHM1	P37292	490 aa	Predicted RBP	4.41	□□□□□ -1.7
TRS65	YGR166W	PSH1	Q12161	406 aa		4.41	□□□□□ -1.7
TRS65	YGR166W	PDC6	P26263	563 aa	Known RBP	4.4	□□□□□ -1.71
TRS65	YGR166W	TPS3	P38426	1054 aa	Known RBP	4.39	□□□□□ -1.71
TRS65	YGR166W	SPR3	P41901	512 aa		4.38	□□□□□ -1.71
TRS65	YGR166W	ISF1	P32488	338 aa		4.36	□□□□□ -1.71
TRS65	YGR166W	EMP47	P43555	445 aa		4.36	□□□□□ -1.71
TRS65	YGR166W	MRX12	P47084	519 aa		4.36	□□□□□ -1.71
TRS65	YGR166W	BUD9	P53226	547 aa		4.36	□□□□□ -1.71
TRS65	YGR166W	APL6	P46682	809 aa		4.35	□□□□□ -1.71
TRS65	YGR166W	NHA1	Q99271	985 aa		4.35	□□□□□ -1.71
TRS65	YGR166W	HAL5	P38970	855 aa	Known RBP	4.35	□□□□□ -1.71
TRS65	YGR166W	SLX8	P40072	274 aa		4.34	□□□□□ -1.71
TRS65	YGR166W	AIM7	Q12156	149 aa		4.34	□□□□□ -1.71
TRS65	YGR166W	PGM2	P37012	569 aa	Known RBP	4.33	□□□□□ -1.72
TRS65	YGR166W	ALG14	P38242	237 aa		4.33	□□□□□ -1.72
TRS65	YGR166W	MSC7	P38694	644 aa		4.32	□□□□□ -1.72
TRS65	YGR166W	RPS31	P05759	152 aa	Known RBP	4.32	□□□□□ -1.72
TRS65	YGR166W	RPP1A	P05318	106 aa	Predicted RBP	4.31	□□□□□ -1.72
TRS65	YGR166W	MCM16	Q12262	181 aa		4.3	□□□□□ -1.72
TRS65	YGR166W	LEU1	P07264	779 aa	Known RBP	4.29	□□□□□ -1.72
TRS65	YGR166W	LIP5	P32875	414 aa		4.29	□□□□□ -1.72
TRS65	YGR166W	PGM1	P33401	570 aa	Known RBP	4.29	□□□□□ -1.72
TRS65	YGR166W	HDA3	Q06623	655 aa		4.29	□□□□□ -1.72
TRS65	YGR166W	GAS5	Q08193	484 aa		4.29	□□□□□ -1.72
TRS65	YGR166W	AI3	P03877	415 aa		4.29	□□□□□ -1.72
TRS65	YGR166W	SSA2	P10592	639 aa	Known RBP	4.29	□□□□□ -1.72
TRS65	YGR166W	MED7	Q08278	222 aa		4.29	□□□□□ -1.72
TRS65	YGR166W	COQ2	P32378	372 aa		4.28	□□□□□ -1.72
TRS65	YGR166W	SOH1	P38633	127 aa		4.28	□□□□□ -1.72
TRS65	YGR166W	AOS1	Q06624	347 aa		4.28	□□□□□ -1.72
TRS65	YGR166W	TRP3	P00937	484 aa		4.27	□□□□□ -1.73
TRS65	YGR166W	RGP1	P16664	663 aa		4.27	□□□□□ -1.73
TRS65	YGR166W	YKR073C	P36153	106 aa		4.27	□□□□□ -1.73
TRS65	YGR166W	SAC7	P17121	654 aa		4.26	□□□□□ -1.73
TRS65	YGR166W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
TRS65	YGR166W	ALD2	P47771	506 aa		4.26	□□□□□ -1.73
TRS65	YGR166W	KAE1	P36132	386 aa		4.26	□□□□□ -1.73
TRS65	YGR166W	YTA6	P40328	754 aa		4.26	□□□□□ -1.73
TRS65	YGR166W	HPC2	Q01448	625 aa		4.26	□□□□□ -1.73
TRS65	YGR166W	NAR1	P23503	491 aa	Known RBP	4.25	□□□□□ -1.73
TRS65	YGR166W	RRM3	P38766	723 aa		4.25	□□□□□ -1.73
TRS65	YGR166W	ARI1	P53111	347 aa	Known RBP	4.25	□□□□□ -1.73
TRS65	YGR166W	YPQ2	Q06328	317 aa		4.25	□□□□□ -1.73
TRS65	YGR166W	ELM1	P32801	640 aa		4.24	□□□□□ -1.73
TRS65	YGR166W	TOS1	P38288	455 aa		4.24	□□□□□ -1.73
TRS65	YGR166W	DMA1	P38823	416 aa		4.24	□□□□□ -1.73
TRS65	YGR166W	ATG3	P40344	310 aa		4.24	□□□□□ -1.73
TRS65	YGR166W	PRK1	P40494	810 aa		4.24	□□□□□ -1.73
TRS65	YGR166W	TFB3	Q03290	321 aa		4.24	□□□□□ -1.73
TRS65	YGR166W	UTP13	Q05946	817 aa	Known RBP	4.24	□□□□□ -1.73
TRS65	YGR166W	CSE4	P36012	229 aa		4.23	□□□□□ -1.73
TRS65	YGR166W	HEH2	Q03281	663 aa		4.23	□□□□□ -1.73
TRS65	YGR166W	GIS4	Q04233	774 aa		4.23	□□□□□ -1.73
TRS65	YGR166W	SWI5	P08153	709 aa		4.22	□□□□□ -1.73
TRS65	YGR166W	SPT5	P27692	1063 aa	Known RBP	4.22	□□□□□ -1.73
TRS65	YGR166W	YNL165W	P53891	406 aa		4.22	□□□□□ -1.73
TRS65	YGR166W	YLR122C	Q12312	125 aa		4.22	□□□□□ -1.73
TRS65	YGR166W	YDJ1	P25491	409 aa	Known RBP	4.21	□□□□□ -1.74
TRS65	YGR166W	CTH1	P47976	325 aa		4.21	□□□□□ -1.74
TRS65	YGR166W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TRS65	YGR166W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
TRS65	YGR166W	SFA1	P32771	386 aa		4.2	□□□□□ -1.74
TRS65	YGR166W	MLF3	P32047	452 aa		4.19	□□□□□ -1.74
TRS65	YGR166W	BRE4	Q07660	1125 aa		4.19	□□□□□ -1.74
TRS65	YGR166W	UBP5	P39944	805 aa		4.18	□□□□□ -1.74
TRS65	YGR166W	YGR130C	P53278	816 aa		4.18	□□□□□ -1.74
TRS65	YGR166W	MCM1	P11746	286 aa		4.16	□□□□□ -1.74
TRS65	YGR166W	YBL036C	P38197	257 aa		4.16	□□□□□ -1.74
TRS65	YGR166W	NCL1	P38205	684 aa	Known RBP	4.16	□□□□□ -1.74
TRS65	YGR166W	Q0182	Q9ZZW1	134 aa		4.16	□□□□□ -1.74
TRS65	YGR166W	RSC6	P25632	483 aa		4.16	□□□□□ -1.74
TRS65	YGR166W	AIM9	P40053	627 aa	Known RBP	4.16	□□□□□ -1.74
TRS65	YGR166W	MTO1	P53070	669 aa		4.16	□□□□□ -1.74
TRS65	YGR166W	RPS6A	P0CX37	236 aa	Known RBP	4.15	□□□□□ -1.75
TRS65	YGR166W	RPS6B	P0CX38	236 aa	Predicted RBP	4.15	□□□□□ -1.75
TRS65	YGR166W	CHS2	P14180	963 aa		4.15	□□□□□ -1.75
TRS65	YGR166W	NGR1	P32831	672 aa	Known RBP	4.14	□□□□□ -1.75
TRS65	YGR166W	SAF1	P38352	637 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 97.8 ms