RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C HXT5P38695 592 aa4.52□□□□□ -1.69
MSH4YFL003C SPT2P06843 333 aaPredicted RBP4.51□□□□□ -1.69
MSH4YFL003C RPS6AP0CX37 236 aaKnown RBP4.51□□□□□ -1.69
MSH4YFL003C RPS6BP0CX38 236 aaPredicted RBP4.51□□□□□ -1.69
MSH4YFL003C POL32P47110 350 aa4.51□□□□□ -1.69
MSH4YFL003C SAS4Q04003 481 aa4.51□□□□□ -1.69
MSH4YFL003C TOS4Q06266 489 aa4.51□□□□□ -1.69
MSH4YFL003C GLO3P38682 493 aaKnown RBP4.51□□□□□ -1.69
MSH4YFL003C YJR107WP47145 328 aa4.51□□□□□ -1.69
MSH4YFL003C BMT6Q12291 365 aa4.51□□□□□ -1.69
MSH4YFL003C MON2P48563 1636 aaPredicted RBP4.5□□□□□ -1.69
MSH4YFL003C SEC20P28791 383 aa4.5□□□□□ -1.69
MSH4YFL003C SEC8P32855 1065 aa4.5□□□□□ -1.69
MSH4YFL003C MRT4P33201 236 aaKnown RBP4.5□□□□□ -1.69
MSH4YFL003C FUR4P05316 633 aaKnown RBP4.5□□□□□ -1.69
MSH4YFL003C STE6P12866 1290 aa4.5□□□□□ -1.69
MSH4YFL003C FBP26P32604 452 aa4.5□□□□□ -1.69
MSH4YFL003C MAG2Q06436 670 aaKnown RBP4.5□□□□□ -1.69
MSH4YFL003C RPB10P22139 70 aa4.49□□□□□ -1.69
MSH4YFL003C VAN1P23642 535 aa4.49□□□□□ -1.69
MSH4YFL003C PAT1P25644 796 aaKnown RBP4.49□□□□□ -1.69
MSH4YFL003C YBL086CP38177 466 aa4.49□□□□□ -1.69
MSH4YFL003C CYT1P07143 309 aa4.49□□□□□ -1.69
MSH4YFL003C YNL165WP53891 406 aa4.49□□□□□ -1.69
MSH4YFL003C PHO4P07270 312 aaKnown RBP4.48□□□□□ -1.69
MSH4YFL003C GYP1Q08484 637 aa4.48□□□□□ -1.69
MSH4YFL003C FYV10P40492 516 aa4.47□□□□□ -1.69
MSH4YFL003C CLA4P48562 842 aa4.47□□□□□ -1.69
MSH4YFL003C ISC10P32645 267 aa4.47□□□□□ -1.69
MSH4YFL003C DAK2P43550 591 aa4.47□□□□□ -1.69
MSH4YFL003C TRS120Q04183 1289 aa4.47□□□□□ -1.69
MSH4YFL003C OCA5P38738 679 aa4.46□□□□□ -1.69
MSH4YFL003C MET10P39692 1035 aa4.46□□□□□ -1.69
MSH4YFL003C SYH1Q02875 849 aaKnown RBP4.46□□□□□ -1.69
MSH4YFL003C TRS33Q99394 268 aa4.46□□□□□ -1.69
MSH4YFL003C KIP2P28743 706 aa4.45□□□□□ -1.7
MSH4YFL003C MET1P36150 593 aa4.45□□□□□ -1.7
MSH4YFL003C YFL034WP43564 1073 aa4.45□□□□□ -1.7
MSH4YFL003C NOP7P53261 605 aaKnown RBP4.45□□□□□ -1.7
MSH4YFL003C FRK1Q03002 865 aaPredicted RBP4.45□□□□□ -1.7
MSH4YFL003C OYE2Q03558 400 aaKnown RBP4.45□□□□□ -1.7
MSH4YFL003C RPS31P05759 152 aaKnown RBP4.45□□□□□ -1.7
MSH4YFL003C WTM2Q12206 467 aa4.45□□□□□ -1.7
MSH4YFL003C NAB2P32505 525 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
MSH4YFL003C UTR2P32623 467 aa4.44□□□□□ -1.7
MSH4YFL003C VRP1P37370 817 aa4.44□□□□□ -1.7
MSH4YFL003C SPR28Q04921 423 aa4.44□□□□□ -1.7
MSH4YFL003C MET32Q12041 191 aa4.44□□□□□ -1.7
MSH4YFL003C MRPL33P20084 86 aa4.43□□□□□ -1.7
MSH4YFL003C FOX2Q02207 900 aaKnown RBP4.43□□□□□ -1.7
MSH4YFL003C ASF1P32447 279 aa4.43□□□□□ -1.7
MSH4YFL003C SSN3P39073 555 aa4.43□□□□□ -1.7
MSH4YFL003C DFG5Q05031 458 aa4.43□□□□□ -1.7
MSH4YFL003C MCM2P29469 868 aa4.42□□□□□ -1.7
MSH4YFL003C MKS1P34072 584 aa4.42□□□□□ -1.7
MSH4YFL003C SHM1P37292 490 aaPredicted RBP4.42□□□□□ -1.7
MSH4YFL003C UTP7P40055 554 aaKnown RBP4.42□□□□□ -1.7
MSH4YFL003C THI12P42883 340 aa4.42□□□□□ -1.7
MSH4YFL003C THI5P43534 340 aa4.42□□□□□ -1.7
MSH4YFL003C SUM1P46676 1062 aa4.42□□□□□ -1.7
MSH4YFL003C THI11P47183 340 aa4.42□□□□□ -1.7
MSH4YFL003C THI13Q07748 340 aa4.42□□□□□ -1.7
MSH4YFL003C VMA3P25515 160 aa4.42□□□□□ -1.7
MSH4YFL003C RGD2P43556 714 aa4.42□□□□□ -1.7
MSH4YFL003C TY1A-DR3Q12441 440 aa4.42□□□□□ -1.7
MSH4YFL003C MCM1P11746 286 aa4.41□□□□□ -1.7
MSH4YFL003C MRF1P30775 413 aaPredicted RBP4.41□□□□□ -1.7
MSH4YFL003C RPT1P33299 467 aaKnown RBP4.41□□□□□ -1.7
MSH4YFL003C CTR9P89105 1077 aa4.41□□□□□ -1.7
MSH4YFL003C RSC4Q02206 625 aa4.41□□□□□ -1.7
MSH4YFL003C AIR1P40507 360 aaKnown RBP4.4□□□□□ -1.7
MSH4YFL003C AIM44Q99299 758 aa4.4□□□□□ -1.7
MSH4YFL003C COBP00163 385 aa4.4□□□□□ -1.71
MSH4YFL003C SLA1P32790 1244 aa4.4□□□□□ -1.71
MSH4YFL003C RAS1P01119 309 aa4.39□□□□□ -1.71
MSH4YFL003C DAT1P13483 248 aaKnown RBP4.39□□□□□ -1.71
MSH4YFL003C YJL171CP46992 396 aa4.39□□□□□ -1.71
MSH4YFL003C SUT1P53032 299 aaKnown RBP4.39□□□□□ -1.71
MSH4YFL003C HED1Q03937 162 aa4.39□□□□□ -1.71
MSH4YFL003C MLF3P32047 452 aa4.39□□□□□ -1.71
MSH4YFL003C DUR3P33413 735 aa4.39□□□□□ -1.71
MSH4YFL003C YNL011CP53980 444 aa4.39□□□□□ -1.71
MSH4YFL003C CDC55Q00362 526 aa4.39□□□□□ -1.71
MSH4YFL003C Q0182Q9ZZW1 134 aa4.39□□□□□ -1.71
MSH4YFL003C TAT2P38967 592 aa4.38□□□□□ -1.71
MSH4YFL003C SPR3P41901 512 aa4.38□□□□□ -1.71
MSH4YFL003C ALD3P54114 506 aa4.38□□□□□ -1.71
MSH4YFL003C RPC31P17890 251 aa4.37□□□□□ -1.71
MSH4YFL003C MSN1P22148 382 aa4.37□□□□□ -1.71
MSH4YFL003C FAA3P39002 694 aa4.37□□□□□ -1.71
MSH4YFL003C CWH41P53008 833 aa4.37□□□□□ -1.71
MSH4YFL003C SVF1Q05515 481 aa4.37□□□□□ -1.71
MSH4YFL003C BDS1Q08347 646 aa4.37□□□□□ -1.71
MSH4YFL003C HXK1P04806 485 aaKnown RBP4.37□□□□□ -1.71
MSH4YFL003C CYC8P14922 966 aa4.37□□□□□ -1.71
MSH4YFL003C MTO1P53070 669 aa4.37□□□□□ -1.71
MSH4YFL003C UFD2P54860 961 aa4.37□□□□□ -1.71
MSH4YFL003C YTA7P40340 1379 aa4.36□□□□□ -1.71
MSH4YFL003C SIS1P25294 352 aaKnown RBP4.36□□□□□ -1.71
MSH4YFL003C UGA4P32837 571 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 101.4 ms