RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W SPT2P06843 333 aaPredicted RBP4.86□□□□□ -1.63
YCK3YER123W AIM7Q12156 149 aa4.86□□□□□ -1.63
YCK3YER123W KNS1P32350 737 aaPredicted RBP4.85□□□□□ -1.63
YCK3YER123W UTR2P32623 467 aa4.85□□□□□ -1.63
YCK3YER123W IRC24P40580 263 aa4.85□□□□□ -1.63
YCK3YER123W TBS1P38114 1094 aa4.84□□□□□ -1.63
YCK3YER123W PDC5P16467 563 aaKnown RBP4.83□□□□□ -1.64
YCK3YER123W ALA1P40825 983 aaKnown RBP4.83□□□□□ -1.64
YCK3YER123W JJJ2P46997 583 aa4.82□□□□□ -1.64
YCK3YER123W ISR1Q06098 443 aaKnown RBP4.82□□□□□ -1.64
YCK3YER123W IRE1P32361 1115 aa4.82□□□□□ -1.64
YCK3YER123W MRPL16P38064 232 aa4.82□□□□□ -1.64
YCK3YER123W UTP7P40055 554 aaKnown RBP4.82□□□□□ -1.64
YCK3YER123W MRX12P47084 519 aa4.82□□□□□ -1.64
YCK3YER123W SUM1P46676 1062 aa4.81□□□□□ -1.64
YCK3YER123W YPL034WQ03083 165 aa4.81□□□□□ -1.64
YCK3YER123W PRY1P47032 299 aa4.8□□□□□ -1.64
YCK3YER123W ALO1P54783 526 aaKnown RBP4.8□□□□□ -1.64
YCK3YER123W OMA1P36163 345 aa4.78□□□□□ -1.64
YCK3YER123W STB3Q12427 513 aa4.78□□□□□ -1.64
YCK3YER123W APL6P46682 809 aa4.78□□□□□ -1.64
YCK3YER123W TY1A-DR2Q03964 440 aaKnown RBP4.78□□□□□ -1.64
YCK3YER123W SSA2P10592 639 aaKnown RBP4.77□□□□□ -1.65
YCK3YER123W PDC6P26263 563 aaKnown RBP4.77□□□□□ -1.65
YCK3YER123W SHM1P37292 490 aaPredicted RBP4.77□□□□□ -1.65
YCK3YER123W INP52P50942 1183 aa4.77□□□□□ -1.65
YCK3YER123W PSH1Q12161 406 aa4.77□□□□□ -1.65
YCK3YER123W DMA1P38823 416 aa4.76□□□□□ -1.65
YCK3YER123W SPR3P41901 512 aa4.76□□□□□ -1.65
YCK3YER123W EMP47P43555 445 aa4.75□□□□□ -1.65
YCK3YER123W RPP1AP05318 106 aaPredicted RBP4.74□□□□□ -1.65
YCK3YER123W TPS3P38426 1054 aaKnown RBP4.74□□□□□ -1.65
YCK3YER123W HAL5P38970 855 aaKnown RBP4.74□□□□□ -1.65
YCK3YER123W SLX8P40072 274 aa4.74□□□□□ -1.65
YCK3YER123W ISF1P32488 338 aa4.72□□□□□ -1.65
YCK3YER123W MCM16Q12262 181 aa4.72□□□□□ -1.65
YCK3YER123W CSE4P36012 229 aa4.71□□□□□ -1.66
YCK3YER123W NHA1Q99271 985 aa4.7□□□□□ -1.66
YCK3YER123W MSC7P38694 644 aa4.7□□□□□ -1.66
YCK3YER123W BUD9P53226 547 aa4.7□□□□□ -1.66
YCK3YER123W HDA3Q06623 655 aa4.7□□□□□ -1.66
YCK3YER123W RPS31P05759 152 aaKnown RBP4.69□□□□□ -1.66
YCK3YER123W LEU1P07264 779 aaKnown RBP4.69□□□□□ -1.66
YCK3YER123W SPT5P27692 1063 aaKnown RBP4.69□□□□□ -1.66
YCK3YER123W AVT1P47082 602 aa4.69□□□□□ -1.66
YCK3YER123W ATG3P40344 310 aa4.68□□□□□ -1.66
YCK3YER123W UTP13Q05946 817 aaKnown RBP4.68□□□□□ -1.66
YCK3YER123W PGM2P37012 569 aaKnown RBP4.66□□□□□ -1.66
YCK3YER123W ALG14P38242 237 aa4.66□□□□□ -1.66
YCK3YER123W SOH1P38633 127 aa4.66□□□□□ -1.66
YCK3YER123W HPC2Q01448 625 aa4.66□□□□□ -1.66
YCK3YER123W YPQ2Q06328 317 aa4.65□□□□□ -1.66
YCK3YER123W AI3P03877 415 aa4.65□□□□□ -1.67
YCK3YER123W RGP1P16664 663 aa4.65□□□□□ -1.67
YCK3YER123W PGM1P33401 570 aaKnown RBP4.65□□□□□ -1.67
YCK3YER123W ALD2P47771 506 aa4.64□□□□□ -1.67
YCK3YER123W TFB3Q03290 321 aa4.64□□□□□ -1.67
YCK3YER123W YTA6P40328 754 aa4.63□□□□□ -1.67
YCK3YER123W HEH2Q03281 663 aa4.63□□□□□ -1.67
YCK3YER123W SWI5P08153 709 aa4.61□□□□□ -1.67
YCK3YER123W SAC7P17121 654 aa4.61□□□□□ -1.67
YCK3YER123W NAB2P32505 525 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
YCK3YER123W MED7Q08278 222 aa4.61□□□□□ -1.67
YCK3YER123W YDJ1P25491 409 aaKnown RBP4.61□□□□□ -1.67
YCK3YER123W YPP1P46951 817 aa4.61□□□□□ -1.67
YCK3YER123W ARI1P53111 347 aaKnown RBP4.61□□□□□ -1.67
YCK3YER123W AOS1Q06624 347 aa4.61□□□□□ -1.67
YCK3YER123W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
YCK3YER123W MCM1P11746 286 aa4.59□□□□□ -1.67
YCK3YER123W NAR1P23503 491 aaKnown RBP4.59□□□□□ -1.67
YCK3YER123W COQ2P32378 372 aa4.59□□□□□ -1.67
YCK3YER123W YBL036CP38197 257 aa4.59□□□□□ -1.67
YCK3YER123W PRK1P40494 810 aa4.59□□□□□ -1.67
YCK3YER123W GIS4Q04233 774 aa4.59□□□□□ -1.67
YCK3YER123W YNL165WP53891 406 aa4.58□□□□□ -1.68
YCK3YER123W SFA1P32771 386 aa4.57□□□□□ -1.68
YCK3YER123W KAE1P36132 386 aa4.57□□□□□ -1.68
YCK3YER123W YKR073CP36153 106 aa4.57□□□□□ -1.68
YCK3YER123W RRM3P38766 723 aa4.57□□□□□ -1.68
YCK3YER123W GAS5Q08193 484 aa4.57□□□□□ -1.68
YCK3YER123W KIN1P13185 1064 aa4.57□□□□□ -1.68
YCK3YER123W LIP5P32875 414 aa4.57□□□□□ -1.68
YCK3YER123W AIM9P40053 627 aaKnown RBP4.57□□□□□ -1.68
YCK3YER123W TRP3P00937 484 aa4.56□□□□□ -1.68
YCK3YER123W ELM1P32801 640 aa4.56□□□□□ -1.68
YCK3YER123W RPS6AP0CX37 236 aaKnown RBP4.55□□□□□ -1.68
YCK3YER123W RPS6BP0CX38 236 aaPredicted RBP4.55□□□□□ -1.68
YCK3YER123W MLF3P32047 452 aa4.55□□□□□ -1.68
YCK3YER123W NCL1P38205 684 aaKnown RBP4.55□□□□□ -1.68
YCK3YER123W PUB1P32588 453 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68 RIP-Chip
YCK3YER123W TOS1P38288 455 aa4.53□□□□□ -1.68
YCK3YER123W YFL034WP43564 1073 aa4.53□□□□□ -1.68
YCK3YER123W YLR122CQ12312 125 aa4.53□□□□□ -1.68
YCK3YER123W Q0182Q9ZZW1 134 aa4.53□□□□□ -1.68
YCK3YER123W SKP1P52286 194 aa4.52□□□□□ -1.69
YCK3YER123W CTH1P47976 325 aa4.51□□□□□ -1.69
YCK3YER123W MTO1P53070 669 aa4.51□□□□□ -1.69
YCK3YER123W RSC6P25632 483 aa4.5□□□□□ -1.69
YCK3YER123W GUA1P38625 525 aaKnown RBP4.5□□□□□ -1.69
YCK3YER123W BRE4Q07660 1125 aa4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms