RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS52	YDR484W	MET1	P36150	593 aa		4.43	□□□□□ -1.7
VPS52	YDR484W	SSN3	P39073	555 aa		4.43	□□□□□ -1.7
VPS52	YDR484W	IRC24	P40580	263 aa		4.42	□□□□□ -1.7
VPS52	YDR484W	TFB3	Q03290	321 aa		4.42	□□□□□ -1.7
VPS52	YDR484W	WTM2	Q12206	467 aa		4.42	□□□□□ -1.7
VPS52	YDR484W	DAT1	P13483	248 aa	Known RBP	4.41	□□□□□ -1.7
VPS52	YDR484W	FPS1	P23900	669 aa		4.41	□□□□□ -1.7
VPS52	YDR484W	AHP1	P38013	176 aa	Known RBP	4.41	□□□□□ -1.7
VPS52	YDR484W	GLT1	Q12680	2145 aa	Known RBP	4.41	□□□□□ -1.7
VPS52	YDR484W	RAD59	Q12223	238 aa		4.4	□□□□□ -1.7
VPS52	YDR484W	TY1A-DR3	Q12441	440 aa		4.4	□□□□□ -1.71
VPS52	YDR484W	ALO1	P54783	526 aa	Known RBP	4.39	□□□□□ -1.71
VPS52	YDR484W	YPL034W	Q03083	165 aa		4.38	□□□□□ -1.71
VPS52	YDR484W	STE20	Q03497	939 aa	Known RBP	4.38	□□□□□ -1.71
VPS52	YDR484W	CSE4	P36012	229 aa		4.37	□□□□□ -1.71
VPS52	YDR484W	YBL036C	P38197	257 aa		4.37	□□□□□ -1.71
VPS52	YDR484W	PKC1	P24583	1151 aa		4.36	□□□□□ -1.71
VPS52	YDR484W	ALA1	P40825	983 aa	Known RBP	4.36	□□□□□ -1.71
VPS52	YDR484W	PRY1	P47032	299 aa		4.36	□□□□□ -1.71
VPS52	YDR484W	OMA1	P36163	345 aa		4.36	□□□□□ -1.71
VPS52	YDR484W	NAF1	P53919	492 aa	Known RBP	4.36	□□□□□ -1.71
VPS52	YDR484W	TAF7	Q05021	590 aa		4.36	□□□□□ -1.71
VPS52	YDR484W	UTR2	P32623	467 aa		4.34	□□□□□ -1.71
VPS52	YDR484W	TBS1	P38114	1094 aa		4.34	□□□□□ -1.71
VPS52	YDR484W	UTP7	P40055	554 aa	Known RBP	4.34	□□□□□ -1.71
VPS52	YDR484W	SPT2	P06843	333 aa	Predicted RBP	4.34	□□□□□ -1.71
VPS52	YDR484W	PDC5	P16467	563 aa	Known RBP	4.34	□□□□□ -1.71
VPS52	YDR484W	KNS1	P32350	737 aa	Predicted RBP	4.34	□□□□□ -1.71
VPS52	YDR484W	MRPL16	P38064	232 aa		4.34	□□□□□ -1.71
VPS52	YDR484W	MAK16	P10962	306 aa	Predicted RBP	4.33	□□□□□ -1.72
VPS52	YDR484W	IRE1	P32361	1115 aa		4.33	□□□□□ -1.72
VPS52	YDR484W	YJL007C	P47080	104 aa		4.33	□□□□□ -1.72
VPS52	YDR484W	FRA1	Q07825	749 aa		4.33	□□□□□ -1.72
VPS52	YDR484W	SPT5	P27692	1063 aa	Known RBP	4.33	□□□□□ -1.72
VPS52	YDR484W	ISR1	Q06098	443 aa	Known RBP	4.32	□□□□□ -1.72
VPS52	YDR484W	BIM1	P40013	344 aa		4.31	□□□□□ -1.72
VPS52	YDR484W	RPL34B	P40525	121 aa	Known RBP	4.3	□□□□□ -1.72
VPS52	YDR484W	JJJ2	P46997	583 aa		4.3	□□□□□ -1.72
VPS52	YDR484W	INP52	P50942	1183 aa		4.3	□□□□□ -1.72
VPS52	YDR484W	TY1A-DR2	Q03964	440 aa	Known RBP	4.3	□□□□□ -1.72
VPS52	YDR484W	STB3	Q12427	513 aa		4.3	□□□□□ -1.72
VPS52	YDR484W	BIO2	P32451	375 aa		4.29	□□□□□ -1.72
VPS52	YDR484W	SUM1	P46676	1062 aa		4.29	□□□□□ -1.72
VPS52	YDR484W	RLF2	Q12495	606 aa		4.29	□□□□□ -1.72
VPS52	YDR484W	ATG32	P40458	529 aa		4.28	□□□□□ -1.72
VPS52	YDR484W	YNL108C	P53929	270 aa		4.28	□□□□□ -1.72
VPS52	YDR484W	SHM1	P37292	490 aa	Predicted RBP	4.27	□□□□□ -1.73
VPS52	YDR484W	YPP1	P46951	817 aa		4.27	□□□□□ -1.73
VPS52	YDR484W	PSH1	Q12161	406 aa		4.27	□□□□□ -1.73
VPS52	YDR484W	TIF1	P10081	395 aa	Known RBP	4.27	□□□□□ -1.73
VPS52	YDR484W	SUP45	P12385	437 aa	Known RBP	4.27	□□□□□ -1.73
VPS52	YDR484W	YDJ1	P25491	409 aa	Known RBP	4.27	□□□□□ -1.73
VPS52	YDR484W	TPS3	P38426	1054 aa	Known RBP	4.27	□□□□□ -1.73
VPS52	YDR484W	AVT1	P47082	602 aa		4.27	□□□□□ -1.73
VPS52	YDR484W	PDC6	P26263	563 aa	Known RBP	4.26	□□□□□ -1.73
VPS52	YDR484W	SPR3	P41901	512 aa		4.26	□□□□□ -1.73
VPS52	YDR484W	MRX12	P47084	519 aa		4.26	□□□□□ -1.73
VPS52	YDR484W	RTG2	P32608	588 aa	Known RBP	4.25	□□□□□ -1.73
VPS52	YDR484W	EMP47	P43555	445 aa		4.25	□□□□□ -1.73
VPS52	YDR484W	MCM16	Q12262	181 aa		4.25	□□□□□ -1.73
VPS52	YDR484W	ENO2	P00925	437 aa	Known RBP	4.24	□□□□□ -1.73
VPS52	YDR484W	BUD9	P53226	547 aa		4.23	□□□□□ -1.73
VPS52	YDR484W	ISF1	P32488	338 aa		4.23	□□□□□ -1.73
VPS52	YDR484W	SLX8	P40072	274 aa		4.23	□□□□□ -1.73
VPS52	YDR484W	NHA1	Q99271	985 aa		4.23	□□□□□ -1.73
VPS52	YDR484W	HAL5	P38970	855 aa	Known RBP	4.22	□□□□□ -1.73
VPS52	YDR484W	ATG3	P40344	310 aa		4.22	□□□□□ -1.73
VPS52	YDR484W	RIM21	P48565	533 aa		4.22	□□□□□ -1.73
VPS52	YDR484W	APL6	P46682	809 aa		4.21	□□□□□ -1.74
VPS52	YDR484W	RPS31	P05759	152 aa	Known RBP	4.21	□□□□□ -1.74
VPS52	YDR484W	SIS2	P36024	562 aa		4.2	□□□□□ -1.74
VPS52	YDR484W	ALG14	P38242	237 aa		4.2	□□□□□ -1.74
VPS52	YDR484W	ENO1	P00924	437 aa	Known RBP	4.19	□□□□□ -1.74
VPS52	YDR484W	RPP1A	P05318	106 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS52	YDR484W	PGM2	P37012	569 aa	Known RBP	4.19	□□□□□ -1.74
VPS52	YDR484W	MRX10	Q05648	414 aa		4.19	□□□□□ -1.74
VPS52	YDR484W	LEU1	P07264	779 aa	Known RBP	4.19	□□□□□ -1.74
VPS52	YDR484W	MSC7	P38694	644 aa		4.19	□□□□□ -1.74
VPS52	YDR484W	HDA3	Q06623	655 aa		4.19	□□□□□ -1.74
VPS52	YDR484W	UTP13	Q05946	817 aa	Known RBP	4.18	□□□□□ -1.74
VPS52	YDR484W	SSA4	P22202	642 aa	Known RBP	4.17	□□□□□ -1.74
VPS52	YDR484W	MED7	Q08278	222 aa		4.17	□□□□□ -1.74
VPS52	YDR484W	TTI1	P36097	1038 aa		4.16	□□□□□ -1.74
VPS52	YDR484W	SOH1	P38633	127 aa		4.16	□□□□□ -1.74
VPS52	YDR484W	AI3	P03877	415 aa		4.15	□□□□□ -1.74
VPS52	YDR484W	RGP1	P16664	663 aa		4.15	□□□□□ -1.74
VPS52	YDR484W	SAC7	P17121	654 aa		4.15	□□□□□ -1.74
VPS52	YDR484W	RDS2	P19541	446 aa	Known RBP	4.15	□□□□□ -1.74
VPS52	YDR484W	COQ2	P32378	372 aa		4.15	□□□□□ -1.75
VPS52	YDR484W	PEP12	P32854	288 aa		4.15	□□□□□ -1.75
VPS52	YDR484W	LIP5	P32875	414 aa		4.15	□□□□□ -1.75
VPS52	YDR484W	YTA6	P40328	754 aa		4.15	□□□□□ -1.75
VPS52	YDR484W	GAS5	Q08193	484 aa		4.15	□□□□□ -1.75
VPS52	YDR484W	CPS1	P27614	576 aa		4.14	□□□□□ -1.75
VPS52	YDR484W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
VPS52	YDR484W	PGM1	P33401	570 aa	Known RBP	4.14	□□□□□ -1.75
VPS52	YDR484W	TRP3	P00937	484 aa		4.13	□□□□□ -1.75
VPS52	YDR484W	KAE1	P36132	386 aa		4.13	□□□□□ -1.75
VPS52	YDR484W	ALD2	P47771	506 aa		4.13	□□□□□ -1.75
VPS52	YDR484W	HEH2	Q03281	663 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms