RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	KTR1	P27810	393 aa	Known RBP	5.23	□□□□□ -1.57
SBE2	YDR351W	ANP1	P32629	500 aa		5.23	□□□□□ -1.57
SBE2	YDR351W	SAS3	P34218	831 aa		5.23	□□□□□ -1.57
SBE2	YDR351W	HXT5	P38695	592 aa		5.23	□□□□□ -1.57
SBE2	YDR351W	EMP47	P43555	445 aa		5.23	□□□□□ -1.57
SBE2	YDR351W	BDF2	Q07442	638 aa		5.23	□□□□□ -1.57
SBE2	YDR351W	CDC45	Q08032	650 aa		5.23	□□□□□ -1.57
SBE2	YDR351W	MET6	P05694	767 aa	Known RBP	5.22	□□□□□ -1.57
SBE2	YDR351W	YBL036C	P38197	257 aa		5.22	□□□□□ -1.57
SBE2	YDR351W	RAD4	P14736	754 aa		5.22	□□□□□ -1.57
SBE2	YDR351W	STE5	P32917	917 aa		5.22	□□□□□ -1.57
SBE2	YDR351W	RCR1	P38212	213 aa		5.22	□□□□□ -1.57
SBE2	YDR351W	VPS16	Q03308	798 aa		5.22	□□□□□ -1.57
SBE2	YDR351W	PIN2	Q12057	282 aa		5.22	□□□□□ -1.57
SBE2	YDR351W	SPT7	P35177	1332 aa		5.22	□□□□□ -1.57
SBE2	YDR351W	BDF1	P35817	686 aa		5.21	□□□□□ -1.57
SBE2	YDR351W	TGL4	P36165	910 aa		5.21	□□□□□ -1.57
SBE2	YDR351W	TIM11	P81449	96 aa	Predicted RBP	5.21	□□□□□ -1.57
SBE2	YDR351W	KAR5	Q04746	504 aa		5.21	□□□□□ -1.57
SBE2	YDR351W	PIF1	P07271	859 aa		5.21	□□□□□ -1.58
SBE2	YDR351W	SUP45	P12385	437 aa	Known RBP	5.21	□□□□□ -1.58
SBE2	YDR351W	MTC2	P34246	357 aa		5.21	□□□□□ -1.58
SBE2	YDR351W	APE4	P38821	490 aa		5.21	□□□□□ -1.58
SBE2	YDR351W	RTF1	P53064	558 aa		5.21	□□□□□ -1.58
SBE2	YDR351W	PSR1	Q07800	427 aa		5.21	□□□□□ -1.58
SBE2	YDR351W	CDC53	Q12018	815 aa	Known RBP	5.21	□□□□□ -1.58
SBE2	YDR351W	SLX4	Q12098	748 aa		5.21	□□□□□ -1.58
SBE2	YDR351W	TEA1	P47988	759 aa		5.2	□□□□□ -1.58
SBE2	YDR351W	VIP1	Q06685	1146 aa	Known RBP	5.2	□□□□□ -1.58
SBE2	YDR351W	PPM2	Q08282	695 aa		5.2	□□□□□ -1.58
SBE2	YDR351W	SGT2	Q12118	346 aa	Known RBP	5.2	□□□□□ -1.58
SBE2	YDR351W	DBP10	Q12389	995 aa	Known RBP	5.2	□□□□□ -1.58
SBE2	YDR351W	BOI1	P38041	980 aa	Known RBP	5.2	□□□□□ -1.58
SBE2	YDR351W	TPS3	P38426	1054 aa	Known RBP	5.2	□□□□□ -1.58
SBE2	YDR351W	BNI5	P53890	448 aa	Known RBP	5.2	□□□□□ -1.58
SBE2	YDR351W	YNL108C	P53929	270 aa		5.2	□□□□□ -1.58
SBE2	YDR351W	MRX10	Q05648	414 aa		5.2	□□□□□ -1.58
SBE2	YDR351W	RSC2	Q06488	889 aa		5.2	□□□□□ -1.58
SBE2	YDR351W	TPM1	P17536	199 aa	Known RBP	5.19	□□□□□ -1.58
SBE2	YDR351W	KRR1	P25586	316 aa	Predicted RBP	5.19	□□□□□ -1.58
SBE2	YDR351W	RRN3	P36070	627 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	MGE1	P38523	228 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	YAP1801	P38856	637 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	VTI1	Q04338	217 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	AI2	P03876	854 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	ATP4	P05626	244 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	MRF1	P30775	413 aa	Predicted RBP	5.19	□□□□□ -1.58
SBE2	YDR351W	CRP1	P38845	465 aa	Known RBP	5.19	□□□□□ -1.58
SBE2	YDR351W	TAT2	P38967	592 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	YOR238W	Q08634	303 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	YOR131C	Q12486	218 aa		5.19	□□□□□ -1.58
SBE2	YDR351W	ENO1	P00924	437 aa	Known RBP	5.18	□□□□□ -1.58
SBE2	YDR351W	SIT4	P20604	311 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	JNM1	P36224	373 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	FUN12	P39730	1002 aa	Known RBP	5.18	□□□□□ -1.58
SBE2	YDR351W	TIM54	P47045	478 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	SRB7	P47822	140 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	VPS29	P38759	282 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	YGR016W	P53209	190 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	HOL1	P53389	586 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	NST1	P53935	1240 aa		5.18	□□□□□ -1.58
SBE2	YDR351W	STO1	P34160	861 aa	Known RBP	5.17	□□□□□ -1.58
SBE2	YDR351W	APL2	P36000	726 aa	Predicted RBP	5.17	□□□□□ -1.58
SBE2	YDR351W	NUP82	P40368	713 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	FYV10	P40492	516 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	ELA1	P53861	379 aa	Predicted RBP	5.17	□□□□□ -1.58
SBE2	YDR351W	APC5	Q08683	685 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	WRS1	Q12109	432 aa	Known RBP	5.17	□□□□□ -1.58
SBE2	YDR351W	CHD1	P32657	1468 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	INH1	P01097	85 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	URA1	P28272	314 aa	Predicted RBP	5.17	□□□□□ -1.58
SBE2	YDR351W	NPL4	P33755	580 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	CSE4	P36012	229 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	YPR172W	Q06608	200 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	RIX7	Q07844	837 aa	Known RBP	5.17	□□□□□ -1.58
SBE2	YDR351W	TCB1	Q12466	1186 aa		5.17	□□□□□ -1.58
SBE2	YDR351W	SPS1	P08458	490 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	HOM3	P10869	527 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	COQ8	P27697	501 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	RXT2	P38255	430 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	THI12	P42883	340 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	THI5	P43534	340 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	ACF4	P47129	309 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	THI11	P47183	340 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
SBE2	YDR351W	THI13	Q07748	340 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	CDC31	P06704	161 aa	Known RBP	5.16	□□□□□ -1.58
SBE2	YDR351W	SRM1	P21827	482 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	PEX6	P33760	1030 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	GRS1	P38088	690 aa	Known RBP	5.16	□□□□□ -1.58
SBE2	YDR351W	CAJ1	P39101	391 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	DOT6	P40059	670 aa	Known RBP	5.16	□□□□□ -1.58
SBE2	YDR351W	BBC1	P47068	1157 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	YNR029C	P53729	429 aa	Known RBP	5.16	□□□□□ -1.58
SBE2	YDR351W	YLR352W	Q06479	807 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	YBL029C-A	Q3E756	94 aa		5.16	□□□□□ -1.58
SBE2	YDR351W	PSE1	P32337	1089 aa	Known RBP	5.15	□□□□□ -1.58
SBE2	YDR351W	MET4	P32389	672 aa		5.15	□□□□□ -1.58
SBE2	YDR351W	PIM1	P36775	1133 aa		5.15	□□□□□ -1.58
SBE2	YDR351W	ABZ1	P37254	787 aa	Predicted RBP	5.15	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms