RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	SNF2	P22082	1703 aa		5.02	□□□□□ -1.61
UPC2	YDR213W	SES1	P07284	462 aa	Known RBP	5.02	□□□□□ -1.61
UPC2	YDR213W	SPC110	P32380	944 aa		5.02	□□□□□ -1.61
UPC2	YDR213W	CIN4	P39110	191 aa		5.02	□□□□□ -1.61
UPC2	YDR213W	KAR2	P16474	682 aa	Known RBP	5.01	□□□□□ -1.61
UPC2	YDR213W	MSH3	P25336	1018 aa		5.01	□□□□□ -1.61
UPC2	YDR213W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
UPC2	YDR213W	ROM2	P51862	1356 aa	Known RBP	5.01	□□□□□ -1.61
UPC2	YDR213W	HPC2	Q01448	625 aa		5.01	□□□□□ -1.61
UPC2	YDR213W	TCD1	P38756	429 aa		5.01	□□□□□ -1.61
UPC2	YDR213W	VPS60	Q03390	229 aa		5.01	□□□□□ -1.61
UPC2	YDR213W	HIM1	Q06674	414 aa		5.01	□□□□□ -1.61
UPC2	YDR213W	YBR287W	P38355	427 aa		5	□□□□□ -1.61
UPC2	YDR213W	CWH41	P53008	833 aa		5	□□□□□ -1.61
UPC2	YDR213W	YGL140C	P53120	1219 aa		5	□□□□□ -1.61
UPC2	YDR213W	DEF1	P35732	738 aa	Known RBP	5	□□□□□ -1.61
UPC2	YDR213W	MRPL10	P36520	322 aa		5	□□□□□ -1.61
UPC2	YDR213W	MAP2	P38174	421 aa	Known RBP	5	□□□□□ -1.61
UPC2	YDR213W	PRP31	P49704	494 aa	Predicted RBP	5	□□□□□ -1.61
UPC2	YDR213W	SPO1	P53541	631 aa		5	□□□□□ -1.61
UPC2	YDR213W	ARP5	P53946	755 aa		5	□□□□□ -1.61
UPC2	YDR213W	HRQ1	Q05549	1077 aa		5	□□□□□ -1.61
UPC2	YDR213W	ATG32	P40458	529 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	ENT3	P47160	408 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	YMR102C	Q03177	834 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	VMS1	Q04311	632 aa	Known RBP	4.99	□□□□□ -1.61
UPC2	YDR213W	MAK21	Q12176	1025 aa	Known RBP	4.99	□□□□□ -1.61
UPC2	YDR213W	KRE5	P22023	1365 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	BIK1	P11709	440 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	PTC3	P34221	468 aa	Known RBP	4.99	□□□□□ -1.61
UPC2	YDR213W	SIC1	P38634	284 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	RSM25	P40496	264 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	GCR2	Q01722	534 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	MSB4	Q12317	492 aa		4.99	□□□□□ -1.61
UPC2	YDR213W	KRI1	P42846	591 aa	Known RBP	4.98	□□□□□ -1.61
UPC2	YDR213W	PIL1	P53252	339 aa	Known RBP	4.98	□□□□□ -1.61
UPC2	YDR213W	TRS33	Q99394	268 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	NUP192	P47054	1683 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	RAD50	P12753	1312 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	ERG12	P07277	443 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	DBP1	P24784	617 aa	Known RBP	4.98	□□□□□ -1.61
UPC2	YDR213W	NMD2	P38798	1089 aa	Known RBP	4.98	□□□□□ -1.61
UPC2	YDR213W	SLX8	P40072	274 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	SRC1	Q03707	834 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	TLG2	Q08144	397 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	RAD9	P14737	1309 aa		4.98	□□□□□ -1.61
UPC2	YDR213W	PSE1	P32337	1089 aa	Known RBP	4.97	□□□□□ -1.61
UPC2	YDR213W	BDH2	P39713	417 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	SAP1	P39955	897 aa	Known RBP	4.97	□□□□□ -1.61
UPC2	YDR213W	BIM1	P40013	344 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	OSW7	P43611	510 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	YGL082W	P53155	381 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	HST1	P53685	503 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	KRE33	P53914	1056 aa	Known RBP	4.97	□□□□□ -1.61
UPC2	YDR213W	YML133C	Q03099	1374 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	YLL067C	Q07888	1374 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	YLL066C	Q99208	1374 aa		4.97	□□□□□ -1.61
UPC2	YDR213W	STU2	P46675	888 aa		4.96	□□□□□ -1.61
UPC2	YDR213W	MRX12	P47084	519 aa		4.96	□□□□□ -1.61
UPC2	YDR213W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.61	not detected
UPC2	YDR213W	CAB1	Q04430	367 aa		4.96	□□□□□ -1.61
UPC2	YDR213W	YLR326W	Q06170	240 aa	Known RBP	4.96	□□□□□ -1.61
UPC2	YDR213W	ENV9	Q08651	330 aa		4.96	□□□□□ -1.61
UPC2	YDR213W	SPT2	P06843	333 aa	Predicted RBP	4.96	□□□□□ -1.62
UPC2	YDR213W	RMD1	Q03441	430 aa		4.96	□□□□□ -1.62
UPC2	YDR213W	YKL068W-A	Q3E826	78 aa		4.96	□□□□□ -1.62
UPC2	YDR213W	YNG2	P38806	282 aa	Known RBP	4.95	□□□□□ -1.62
UPC2	YDR213W	RNT1	Q02555	471 aa		4.95	□□□□□ -1.62
UPC2	YDR213W	VAS1	P07806	1104 aa	Known RBP	4.95	□□□□□ -1.62
UPC2	YDR213W	TRL1	P09880	827 aa	Known RBP	4.95	□□□□□ -1.62
UPC2	YDR213W	RIX1	P38883	763 aa	Predicted RBP	4.95	□□□□□ -1.62
UPC2	YDR213W	PSH1	Q12161	406 aa		4.95	□□□□□ -1.62
UPC2	YDR213W	TYS1	P36421	394 aa	Known RBP	4.95	□□□□□ -1.62
UPC2	YDR213W	GEF1	P37020	779 aa		4.95	□□□□□ -1.62
UPC2	YDR213W	PBY1	P38254	753 aa		4.95	□□□□□ -1.62
UPC2	YDR213W	VHR2	P40041	505 aa		4.95	□□□□□ -1.62
UPC2	YDR213W	PRP3	Q03338	469 aa	Predicted RBP	4.95	□□□□□ -1.62
UPC2	YDR213W	GYL1	Q04322	720 aa		4.95	□□□□□ -1.62
UPC2	YDR213W	SML1	Q04964	104 aa		4.95	□□□□□ -1.62
UPC2	YDR213W	KEX1	P09620	729 aa		4.94	□□□□□ -1.62
UPC2	YDR213W	SLD2	P34252	453 aa		4.94	□□□□□ -1.62
UPC2	YDR213W	SOL3	P38858	249 aa		4.94	□□□□□ -1.62
UPC2	YDR213W	YGR122W	P53272	402 aa		4.94	□□□□□ -1.62
UPC2	YDR213W	CSI1	Q04368	295 aa		4.94	□□□□□ -1.62
UPC2	YDR213W	VPS41	P38959	992 aa		4.94	□□□□□ -1.62
UPC2	YDR213W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
UPC2	YDR213W	UBP10	P53874	792 aa	Predicted RBP	4.94	□□□□□ -1.62
UPC2	YDR213W	NOB1	Q08444	459 aa	Known RBP	4.94	□□□□□ -1.62
UPC2	YDR213W	FRS2	P15625	503 aa	Known RBP	4.93	□□□□□ -1.62
UPC2	YDR213W	MBR1	P23493	339 aa		4.93	□□□□□ -1.62
UPC2	YDR213W	RTT107	P38850	1070 aa		4.93	□□□□□ -1.62
UPC2	YDR213W	MSH4	P40965	878 aa	Predicted RBP	4.93	□□□□□ -1.62
UPC2	YDR213W	CEP3	P40969	608 aa		4.93	□□□□□ -1.62
UPC2	YDR213W	HOT1	Q03213	719 aa		4.93	□□□□□ -1.62
UPC2	YDR213W	SGD1	Q06132	899 aa		4.93	□□□□□ -1.62
UPC2	YDR213W	RNR2	P09938	399 aa	Known RBP	4.93	□□□□□ -1.62
UPC2	YDR213W	ATF2	P53296	535 aa		4.93	□□□□□ -1.62
UPC2	YDR213W	ECM16	Q04217	1267 aa	Known RBP	4.93	□□□□□ -1.62
UPC2	YDR213W	SEC7	P11075	2009 aa	Known RBP	4.92	□□□□□ -1.62
UPC2	YDR213W	YNL035C	P53962	389 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms