RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C ALA1P40825 983 aaKnown RBP2.35□□□□□ -2.03
SEC1YDR164C PDC5P16467 563 aaKnown RBP2.34□□□□□ -2.03
SEC1YDR164C SAS10Q12136 610 aaPredicted RBP2.34□□□□□ -2.03
SEC1YDR164C UTR2P32623 467 aa2.34□□□□□ -2.04
SEC1YDR164C STE20Q03497 939 aaKnown RBP2.34□□□□□ -2.04
SEC1YDR164C KNS1P32350 737 aaPredicted RBP2.33□□□□□ -2.04
SEC1YDR164C MRPL16P38064 232 aa2.33□□□□□ -2.04
SEC1YDR164C CSN12P47130 423 aa2.33□□□□□ -2.04
SEC1YDR164C TBS1P38114 1094 aa2.33□□□□□ -2.04
SEC1YDR164C ISR1Q06098 443 aaKnown RBP2.33□□□□□ -2.04
SEC1YDR164C STB3Q12427 513 aa2.33□□□□□ -2.04
SEC1YDR164C IRE1P32361 1115 aa2.32□□□□□ -2.04
SEC1YDR164C JJJ2P46997 583 aa2.32□□□□□ -2.04
SEC1YDR164C INP52P50942 1183 aa2.32□□□□□ -2.04
SEC1YDR164C AVT1P47082 602 aa2.32□□□□□ -2.04
SEC1YDR164C FRA1Q07825 749 aa2.32□□□□□ -2.04
SEC1YDR164C SPT2P06843 333 aaPredicted RBP2.31□□□□□ -2.04
SEC1YDR164C MAK16P10962 306 aaPredicted RBP2.31□□□□□ -2.04
SEC1YDR164C TY1A-DR2Q03964 440 aaKnown RBP2.31□□□□□ -2.04
SEC1YDR164C SHM1P37292 490 aaPredicted RBP2.3□□□□□ -2.04
SEC1YDR164C SUM1P46676 1062 aa2.3□□□□□ -2.04
SEC1YDR164C YNR021WP53723 404 aaKnown RBP2.3□□□□□ -2.04
SEC1YDR164C PSH1Q12161 406 aa2.3□□□□□ -2.04
SEC1YDR164C PDC6P26263 563 aaKnown RBP2.29□□□□□ -2.04
SEC1YDR164C TPS3P38426 1054 aaKnown RBP2.29□□□□□ -2.04
SEC1YDR164C ISF1P32488 338 aa2.29□□□□□ -2.04
SEC1YDR164C SPR3P41901 512 aa2.29□□□□□ -2.04
SEC1YDR164C EMP47P43555 445 aa2.28□□□□□ -2.04
SEC1YDR164C HAL5P38970 855 aaKnown RBP2.27□□□□□ -2.05
SEC1YDR164C BUD9P53226 547 aa2.27□□□□□ -2.05
SEC1YDR164C ALG14P38242 237 aa2.27□□□□□ -2.05
SEC1YDR164C NHA1Q99271 985 aa2.27□□□□□ -2.05
SEC1YDR164C PGM2P37012 569 aaKnown RBP2.26□□□□□ -2.05
SEC1YDR164C SLX8P40072 274 aa2.26□□□□□ -2.05
SEC1YDR164C MSC7P38694 644 aa2.26□□□□□ -2.05
SEC1YDR164C MRX12P47084 519 aa2.26□□□□□ -2.05
SEC1YDR164C LIP5P32875 414 aa2.25□□□□□ -2.05
SEC1YDR164C APL6P46682 809 aa2.25□□□□□ -2.05
SEC1YDR164C GAS5Q08193 484 aa2.25□□□□□ -2.05
SEC1YDR164C RPS31P05759 152 aaKnown RBP2.25□□□□□ -2.05
SEC1YDR164C AIM7Q12156 149 aa2.25□□□□□ -2.05
SEC1YDR164C MCM16Q12262 181 aa2.25□□□□□ -2.05
SEC1YDR164C COQ2P32378 372 aa2.24□□□□□ -2.05
SEC1YDR164C HDA3Q06623 655 aa2.24□□□□□ -2.05
SEC1YDR164C MED7Q08278 222 aa2.24□□□□□ -2.05
SEC1YDR164C TRP3P00937 484 aa2.23□□□□□ -2.05
SEC1YDR164C AI3P03877 415 aa2.23□□□□□ -2.05
SEC1YDR164C RPP1AP05318 106 aaPredicted RBP2.23□□□□□ -2.05
SEC1YDR164C LEU1P07264 779 aaKnown RBP2.23□□□□□ -2.05
SEC1YDR164C YKR073CP36153 106 aa2.23□□□□□ -2.05
SEC1YDR164C SOH1P38633 127 aa2.23□□□□□ -2.05
SEC1YDR164C SSA2P10592 639 aaKnown RBP2.23□□□□□ -2.05
SEC1YDR164C RGP1P16664 663 aa2.23□□□□□ -2.05
SEC1YDR164C SAC7P17121 654 aa2.23□□□□□ -2.05
SEC1YDR164C NAB2P32505 525 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05 RIP-Chip
SEC1YDR164C PGM1P33401 570 aaKnown RBP2.23□□□□□ -2.05
SEC1YDR164C KAE1P36132 386 aa2.22□□□□□ -2.05
SEC1YDR164C RRM3P38766 723 aa2.22□□□□□ -2.05
SEC1YDR164C YTA6P40328 754 aa2.22□□□□□ -2.05
SEC1YDR164C ALD2P47771 506 aa2.22□□□□□ -2.05
SEC1YDR164C AOS1Q06624 347 aa2.22□□□□□ -2.05
SEC1YDR164C NAR1P23503 491 aaKnown RBP2.22□□□□□ -2.05
SEC1YDR164C TOS1P38288 455 aa2.22□□□□□ -2.05
SEC1YDR164C HPC2Q01448 625 aa2.22□□□□□ -2.05
SEC1YDR164C DMA1P38823 416 aa2.21□□□□□ -2.06
SEC1YDR164C PRK1P40494 810 aa2.21□□□□□ -2.06
SEC1YDR164C ARI1P53111 347 aaKnown RBP2.21□□□□□ -2.06
SEC1YDR164C TFB3Q03290 321 aa2.21□□□□□ -2.06
SEC1YDR164C SWI5P08153 709 aa2.2□□□□□ -2.06
SEC1YDR164C ATG3P40344 310 aa2.2□□□□□ -2.06
SEC1YDR164C YNL165WP53891 406 aa2.2□□□□□ -2.06
SEC1YDR164C GIS4Q04233 774 aa2.2□□□□□ -2.06
SEC1YDR164C YPQ2Q06328 317 aa2.2□□□□□ -2.06
SEC1YDR164C YDJ1P25491 409 aaKnown RBP2.2□□□□□ -2.06
SEC1YDR164C CTH1P47976 325 aa2.2□□□□□ -2.06
SEC1YDR164C HEH2Q03281 663 aa2.2□□□□□ -2.06
SEC1YDR164C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SEC1YDR164C YLR122CQ12312 125 aa2.2□□□□□ -2.06
SEC1YDR164C PUB1P32588 453 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SEC1YDR164C ELM1P32801 640 aa2.19□□□□□ -2.06
SEC1YDR164C CSE4P36012 229 aa2.19□□□□□ -2.06
SEC1YDR164C SPT5P27692 1063 aaKnown RBP2.19□□□□□ -2.06
SEC1YDR164C MLF3P32047 452 aa2.19□□□□□ -2.06
SEC1YDR164C YGR130CP53278 816 aa2.19□□□□□ -2.06
SEC1YDR164C UTP13Q05946 817 aaKnown RBP2.19□□□□□ -2.06
SEC1YDR164C BRE4Q07660 1125 aa2.19□□□□□ -2.06
SEC1YDR164C SFA1P32771 386 aa2.18□□□□□ -2.06
SEC1YDR164C UBP5P39944 805 aa2.18□□□□□ -2.06
SEC1YDR164C MTO1P53070 669 aa2.17□□□□□ -2.06
SEC1YDR164C Q0182Q9ZZW1 134 aa2.17□□□□□ -2.06
SEC1YDR164C RSC6P25632 483 aa2.17□□□□□ -2.06
SEC1YDR164C NGR1P32831 672 aaKnown RBP2.17□□□□□ -2.06
SEC1YDR164C YBL036CP38197 257 aa2.17□□□□□ -2.06
SEC1YDR164C NCL1P38205 684 aaKnown RBP2.17□□□□□ -2.06
SEC1YDR164C AIM9P40053 627 aaKnown RBP2.17□□□□□ -2.06
SEC1YDR164C RPS6AP0CX37 236 aaKnown RBP2.16□□□□□ -2.06
SEC1YDR164C RPS6BP0CX38 236 aaPredicted RBP2.16□□□□□ -2.06
SEC1YDR164C CHS2P14180 963 aa2.16□□□□□ -2.06
SEC1YDR164C RNQ1P25367 405 aa2.16□□□□□ -2.06
SEC1YDR164C MCM1P11746 286 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms