RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	DIT1	P21623	536 aa		5.59	□□□□□ -1.51
SWF1	YDR126W	HDA3	Q06623	655 aa		5.59	□□□□□ -1.51
SWF1	YDR126W	PHM7	Q12252	991 aa		5.59	□□□□□ -1.51
SWF1	YDR126W	UTP7	P40055	554 aa	Known RBP	5.58	□□□□□ -1.52
SWF1	YDR126W	PUS1	Q12211	544 aa	Known RBP	5.58	□□□□□ -1.52
SWF1	YDR126W	YJL007C	P47080	104 aa		5.57	□□□□□ -1.52
SWF1	YDR126W	YMR265C	Q03508	461 aa	Known RBP	5.57	□□□□□ -1.52
SWF1	YDR126W	SYT1	Q06836	1226 aa		5.57	□□□□□ -1.52
SWF1	YDR126W	YDR461C-A	Q2V2P7	80 aa		5.57	□□□□□ -1.52
SWF1	YDR126W	ALA1	P40825	983 aa	Known RBP	5.56	□□□□□ -1.52
SWF1	YDR126W	JJJ2	P46997	583 aa		5.56	□□□□□ -1.52
SWF1	YDR126W	HGH1	P48362	394 aa	Known RBP	5.56	□□□□□ -1.52
SWF1	YDR126W	AI1	P03875	834 aa		5.55	□□□□□ -1.52
SWF1	YDR126W	RDS2	P19541	446 aa	Known RBP	5.55	□□□□□ -1.52
SWF1	YDR126W	KRE33	P53914	1056 aa	Known RBP	5.55	□□□□□ -1.52
SWF1	YDR126W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
SWF1	YDR126W	IRE1	P32361	1115 aa		5.54	□□□□□ -1.52
SWF1	YDR126W	NSG2	P53898	299 aa		5.54	□□□□□ -1.52
SWF1	YDR126W	MDJ1	P35191	511 aa		5.53	□□□□□ -1.52
SWF1	YDR126W	ADE12	P80210	433 aa	Known RBP	5.53	□□□□□ -1.52
SWF1	YDR126W	MRX10	Q05648	414 aa		5.53	□□□□□ -1.52
SWF1	YDR126W	YPQ2	Q06328	317 aa		5.53	□□□□□ -1.52
SWF1	YDR126W	SWI5	P08153	709 aa		5.52	□□□□□ -1.53
SWF1	YDR126W	SHM1	P37292	490 aa	Predicted RBP	5.52	□□□□□ -1.53
SWF1	YDR126W	AIM9	P40053	627 aa	Known RBP	5.52	□□□□□ -1.53
SWF1	YDR126W	YFL066C	P43538	392 aa		5.52	□□□□□ -1.53
SWF1	YDR126W	YFL034W	P43564	1073 aa		5.52	□□□□□ -1.53
SWF1	YDR126W	BIM1	P40013	344 aa		5.51	□□□□□ -1.53
SWF1	YDR126W	THI72	Q08579	599 aa		5.51	□□□□□ -1.53
SWF1	YDR126W	ENO1	P00924	437 aa	Known RBP	5.5	□□□□□ -1.53
SWF1	YDR126W	ATG32	P40458	529 aa		5.5	□□□□□ -1.53
SWF1	YDR126W	PSH1	Q12161	406 aa		5.5	□□□□□ -1.53
SWF1	YDR126W	RPS6A	P0CX37	236 aa	Known RBP	5.49	□□□□□ -1.53
SWF1	YDR126W	RPS6B	P0CX38	236 aa	Predicted RBP	5.49	□□□□□ -1.53
SWF1	YDR126W	TIF1	P10081	395 aa	Known RBP	5.49	□□□□□ -1.53
SWF1	YDR126W	MCM1	P11746	286 aa		5.49	□□□□□ -1.53
SWF1	YDR126W	PDC6	P26263	563 aa	Known RBP	5.49	□□□□□ -1.53
SWF1	YDR126W	RPL34B	P40525	121 aa	Known RBP	5.49	□□□□□ -1.53
SWF1	YDR126W	LSB3	P43603	459 aa	Known RBP	5.49	□□□□□ -1.53
SWF1	YDR126W	RPS31	P05759	152 aa	Known RBP	5.47	□□□□□ -1.53
SWF1	YDR126W	FPS1	P23900	669 aa		5.47	□□□□□ -1.53
SWF1	YDR126W	RTG2	P32608	588 aa	Known RBP	5.47	□□□□□ -1.53
SWF1	YDR126W	PEP12	P32854	288 aa		5.47	□□□□□ -1.53
SWF1	YDR126W	LEU1	P07264	779 aa	Known RBP	5.46	□□□□□ -1.54
SWF1	YDR126W	NTH2	P35172	780 aa		5.46	□□□□□ -1.54
SWF1	YDR126W	MRPL16	P38064	232 aa		5.46	□□□□□ -1.54
SWF1	YDR126W	TSC13	Q99190	310 aa		5.46	□□□□□ -1.54
SWF1	YDR126W	GPM1	P00950	247 aa	Known RBP	5.45	□□□□□ -1.54
SWF1	YDR126W	STB3	Q12427	513 aa		5.45	□□□□□ -1.54
SWF1	YDR126W	YPR053C	Q6Q5F3	151 aa		5.45	□□□□□ -1.54
SWF1	YDR126W	PDI1	P17967	522 aa	Known RBP	5.44	□□□□□ -1.54
SWF1	YDR126W	SPR3	P41901	512 aa		5.44	□□□□□ -1.54
SWF1	YDR126W	RPP1A	P05318	106 aa	Predicted RBP	5.43	□□□□□ -1.54
SWF1	YDR126W	LEO1	P38439	464 aa		5.43	□□□□□ -1.54
SWF1	YDR126W	YTA6	P40328	754 aa		5.43	□□□□□ -1.54
SWF1	YDR126W	SBE2	P42223	864 aa	Known RBP	5.43	□□□□□ -1.54
SWF1	YDR126W	YNL165W	P53891	406 aa		5.43	□□□□□ -1.54
SWF1	YDR126W	SIS2	P36024	562 aa		5.42	□□□□□ -1.54
SWF1	YDR126W	CCT8	P47079	568 aa	Known RBP	5.42	□□□□□ -1.54
SWF1	YDR126W	ALD2	P47771	506 aa		5.42	□□□□□ -1.54
SWF1	YDR126W	TDA6	Q06466	467 aa		5.42	□□□□□ -1.54
SWF1	YDR126W	CYT1	P07143	309 aa		5.41	□□□□□ -1.54
SWF1	YDR126W	RGP1	P16664	663 aa		5.41	□□□□□ -1.54
SWF1	YDR126W	KNS1	P32350	737 aa	Predicted RBP	5.41	□□□□□ -1.54
SWF1	YDR126W	MCX1	P38323	520 aa	Predicted RBP	5.41	□□□□□ -1.54
SWF1	YDR126W	SKN7	P38889	622 aa		5.41	□□□□□ -1.54
SWF1	YDR126W	PHO87	P25360	923 aa		5.4	□□□□□ -1.54
SWF1	YDR126W	YNR014W	P53719	212 aa		5.4	□□□□□ -1.54
SWF1	YDR126W	TY1A-DR2	Q03964	440 aa	Known RBP	5.4	□□□□□ -1.54
SWF1	YDR126W	HAP4	P14064	554 aa		5.39	□□□□□ -1.55
SWF1	YDR126W	PDC5	P16467	563 aa	Known RBP	5.39	□□□□□ -1.55
SWF1	YDR126W	UBP1	P25037	809 aa		5.39	□□□□□ -1.55
SWF1	YDR126W	MLF3	P32047	452 aa		5.39	□□□□□ -1.55
SWF1	YDR126W	MET1	P36150	593 aa		5.39	□□□□□ -1.55
SWF1	YDR126W	ACS2	P52910	683 aa	Known RBP	5.39	□□□□□ -1.55
SWF1	YDR126W	YMR187C	Q03236	431 aa		5.39	□□□□□ -1.55
SWF1	YDR126W	MSC7	P38694	644 aa		5.38	□□□□□ -1.55
SWF1	YDR126W	UTP4	Q06679	776 aa	Known RBP	5.38	□□□□□ -1.55
SWF1	YDR126W	GAS4	Q08271	471 aa		5.38	□□□□□ -1.55
SWF1	YDR126W	Q0182	Q9ZZW1	134 aa		5.38	□□□□□ -1.55
SWF1	YDR126W	BOI2	P39969	1040 aa		5.37	□□□□□ -1.55
SWF1	YDR126W	KTR7	P40504	517 aa		5.36	□□□□□ -1.55
SWF1	YDR126W	SCD5	P34758	872 aa		5.35	□□□□□ -1.55
SWF1	YDR126W	HEH2	Q03281	663 aa		5.35	□□□□□ -1.55
SWF1	YDR126W	GAL2	P13181	574 aa		5.34	□□□□□ -1.55
SWF1	YDR126W	NGR1	P32831	672 aa	Known RBP	5.34	□□□□□ -1.55
SWF1	YDR126W	SKP1	P52286	194 aa		5.34	□□□□□ -1.55
SWF1	YDR126W	YCK2	P23292	546 aa	Known RBP	5.33	□□□□□ -1.56
SWF1	YDR126W	HXT5	P38695	592 aa		5.33	□□□□□ -1.56
SWF1	YDR126W	MTO1	P53070	669 aa		5.33	□□□□□ -1.56
SWF1	YDR126W	YDR215C	Q12240	137 aa		5.33	□□□□□ -1.56
SWF1	YDR126W	ROM1	P53046	1155 aa		5.32	□□□□□ -1.56
SWF1	YDR126W	NCL1	P38205	684 aa	Known RBP	5.31	□□□□□ -1.56
SWF1	YDR126W	KAP122	P32767	1081 aa		5.3	□□□□□ -1.56
SWF1	YDR126W	TGL4	P36165	910 aa		5.3	□□□□□ -1.56
SWF1	YDR126W	VAN1	P23642	535 aa		5.29	□□□□□ -1.56
SWF1	YDR126W	TTI1	P36097	1038 aa		5.29	□□□□□ -1.56
SWF1	YDR126W	PRK1	P40494	810 aa		5.29	□□□□□ -1.56
SWF1	YDR126W	SBP1	P10080	294 aa	Known RBP	5.28	□□□□□ -1.56
SWF1	YDR126W	RPC31	P17890	251 aa		5.28	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms