RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W NOB1Q08444 459 aaKnown RBP7.91□□□□□ -1.14
SHR3YDL212W TY1A-BLQ12266 440 aa7.91□□□□□ -1.14
SHR3YDL212W YFL034WP43564 1073 aa7.9□□□□□ -1.14
SHR3YDL212W ROM1P53046 1155 aa7.9□□□□□ -1.14
SHR3YDL212W YML083CQ04526 418 aa7.9□□□□□ -1.14
SHR3YDL212W SSA4P22202 642 aaKnown RBP7.89□□□□□ -1.15
SHR3YDL212W TAF7Q05021 590 aa7.89□□□□□ -1.15
SHR3YDL212W YPQ2Q06328 317 aa7.89□□□□□ -1.15
SHR3YDL212W YDL176WQ12027 708 aa7.89□□□□□ -1.15
SHR3YDL212W TY1A-DR3Q12441 440 aa7.89□□□□□ -1.15
SHR3YDL212W HAP4P14064 554 aa7.88□□□□□ -1.15
SHR3YDL212W VTC4P47075 721 aa7.88□□□□□ -1.15
SHR3YDL212W SCW11P53189 542 aa7.88□□□□□ -1.15
SHR3YDL212W SLA1P32790 1244 aa7.87□□□□□ -1.15
SHR3YDL212W UBP2Q01476 1272 aa7.87□□□□□ -1.15
SHR3YDL212W SUB2Q07478 446 aaKnown RBP7.87□□□□□ -1.15
SHR3YDL212W CDC19P00549 500 aaKnown RBP7.86□□□□□ -1.15
SHR3YDL212W DAL1P32375 460 aa7.86□□□□□ -1.15
SHR3YDL212W MSN5P52918 1224 aa7.86□□□□□ -1.15
SHR3YDL212W GAS4Q08271 471 aa7.86□□□□□ -1.15
SHR3YDL212W CYT1P07143 309 aa7.85□□□□□ -1.15
SHR3YDL212W UBX7P38349 436 aa7.85□□□□□ -1.15
SHR3YDL212W OSH7P38755 437 aa7.85□□□□□ -1.15
SHR3YDL212W ACO2P39533 789 aa7.85□□□□□ -1.15
SHR3YDL212W SHM1P37292 490 aaPredicted RBP7.84□□□□□ -1.15
SHR3YDL212W CAF120P53836 1060 aa7.84□□□□□ -1.15
SHR3YDL212W YIR007WP40566 764 aa7.83□□□□□ -1.16
SHR3YDL212W JJJ2P46997 583 aa7.83□□□□□ -1.16
SHR3YDL212W UBP1P25037 809 aa7.82□□□□□ -1.16
SHR3YDL212W NAM8Q00539 523 aaKnown RBP7.82□□□□□ -1.16
SHR3YDL212W GBP2P25555 427 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
SHR3YDL212W ALA1P40825 983 aaKnown RBP7.81□□□□□ -1.16
SHR3YDL212W MCM1P11746 286 aa7.8□□□□□ -1.16
SHR3YDL212W ROG3P43602 733 aa7.8□□□□□ -1.16
SHR3YDL212W YNL165WP53891 406 aa7.8□□□□□ -1.16
SHR3YDL212W CCP1P00431 361 aa7.79□□□□□ -1.16
SHR3YDL212W RPS31P05759 152 aaKnown RBP7.79□□□□□ -1.16
SHR3YDL212W SUV3P32580 737 aa7.79□□□□□ -1.16
SHR3YDL212W AHP1P38013 176 aaKnown RBP7.79□□□□□ -1.16
SHR3YDL212W TY1A-MR1Q04215 440 aa7.79□□□□□ -1.16
SHR3YDL212W IRE1P32361 1115 aa7.77□□□□□ -1.17
SHR3YDL212W NGR1P32831 672 aaKnown RBP7.77□□□□□ -1.17
SHR3YDL212W YPL062WQ02781 134 aa7.77□□□□□ -1.17
SHR3YDL212W VAN1P23642 535 aa7.76□□□□□ -1.17
SHR3YDL212W UBP15P50101 1230 aa7.76□□□□□ -1.17
SHR3YDL212W PSH1Q12161 406 aa7.76□□□□□ -1.17
SHR3YDL212W PDC6P26263 563 aaKnown RBP7.74□□□□□ -1.17
SHR3YDL212W HXT5P38695 592 aa7.74□□□□□ -1.17
SHR3YDL212W MLF3P32047 452 aa7.73□□□□□ -1.17
SHR3YDL212W TPS3P38426 1054 aaKnown RBP7.73□□□□□ -1.17
SHR3YDL212W TRS33Q99394 268 aa7.73□□□□□ -1.17
SHR3YDL212W Q0182Q9ZZW1 134 aa7.72□□□□□ -1.17
SHR3YDL212W CWC15Q03772 175 aaKnown RBP7.71□□□□□ -1.18
SHR3YDL212W ALD4P46367 519 aaKnown RBP7.7□□□□□ -1.18
SHR3YDL212W ALD2P47771 506 aa7.7□□□□□ -1.18
SHR3YDL212W CUZ1P53899 274 aa7.7□□□□□ -1.18
SHR3YDL212W PUF6Q04373 656 aaKnown RBP7.7□□□□□ -1.18
SHR3YDL212W CAB1Q04430 367 aa7.7□□□□□ -1.18
SHR3YDL212W PUN1Q06991 263 aa7.69□□□□□ -1.18
SHR3YDL212W LEU1P07264 779 aaKnown RBP7.68□□□□□ -1.18
SHR3YDL212W SSA1P10591 642 aaKnown RBP7.68□□□□□ -1.18
SHR3YDL212W RGA1P39083 1007 aa7.68□□□□□ -1.18
SHR3YDL212W FOX2Q02207 900 aaKnown RBP7.67□□□□□ -1.18
SHR3YDL212W SCD5P34758 872 aa7.66□□□□□ -1.18
SHR3YDL212W YBR197CP38306 217 aa7.66□□□□□ -1.18
SHR3YDL212W CWH41P53008 833 aa7.66□□□□□ -1.18
SHR3YDL212W HPF1Q05164 967 aa7.66□□□□□ -1.18
SHR3YDL212W SRS2P12954 1174 aa7.65□□□□□ -1.18
SHR3YDL212W DIT1P21623 536 aa7.65□□□□□ -1.18
SHR3YDL212W UTP4Q06679 776 aaKnown RBP7.65□□□□□ -1.18
SHR3YDL212W MRPL16P38064 232 aa7.63□□□□□ -1.19
SHR3YDL212W YTA6P40328 754 aa7.63□□□□□ -1.19
SHR3YDL212W YMR265CQ03508 461 aaKnown RBP7.63□□□□□ -1.19
SHR3YDL212W PNP1Q05788 311 aa7.63□□□□□ -1.19
SHR3YDL212W STB3Q12427 513 aa7.63□□□□□ -1.19
SHR3YDL212W ISC10P32645 267 aa7.62□□□□□ -1.19
SHR3YDL212W YGR035CP53222 116 aa7.62□□□□□ -1.19
SHR3YDL212W RGP1P16664 663 aa7.61□□□□□ -1.19
SHR3YDL212W MRPL33P20084 86 aa7.61□□□□□ -1.19
SHR3YDL212W MTO1P53070 669 aa7.61□□□□□ -1.19
SHR3YDL212W RPL34AP87262 121 aaPredicted RBP7.61□□□□□ -1.19
SHR3YDL212W GEF1P37020 779 aa7.6□□□□□ -1.19
SHR3YDL212W BOI1P38041 980 aaKnown RBP7.6□□□□□ -1.19
SHR3YDL212W SPR3P41901 512 aa7.6□□□□□ -1.19
SHR3YDL212W KRE33P53914 1056 aaKnown RBP7.6□□□□□ -1.19
SHR3YDL212W SYT1Q06836 1226 aa7.6□□□□□ -1.19
SHR3YDL212W VMA3P25515 160 aa7.59□□□□□ -1.19
SHR3YDL212W CEM1P39525 442 aa7.59□□□□□ -1.19
SHR3YDL212W BOL3P39724 118 aa7.59□□□□□ -1.19
SHR3YDL212W QDR2P40474 542 aa7.59□□□□□ -1.19
SHR3YDL212W JJJ3P47138 172 aa7.58□□□□□ -1.2
SHR3YDL212W YDR461C-AQ2V2P7 80 aa7.58□□□□□ -1.2
SHR3YDL212W RPC31P17890 251 aa7.57□□□□□ -1.2
SHR3YDL212W KAP122P32767 1081 aa7.57□□□□□ -1.2
SHR3YDL212W LYS5P50113 272 aa7.57□□□□□ -1.2
SHR3YDL212W ADE12P80210 433 aaKnown RBP7.57□□□□□ -1.2
SHR3YDL212W NAB2P32505 525 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
SHR3YDL212W KTR2P33550 425 aa7.56□□□□□ -1.2
SHR3YDL212W CUS1Q02554 436 aaPredicted RBP7.56□□□□□ -1.2
SHR3YDL212W MSC7P38694 644 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms