RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W TBS1P38114 1094 aa6.67□□□□□ -1.34
KIN28YDL108W ROM1P53046 1155 aa6.67□□□□□ -1.34
KIN28YDL108W MTC5Q03897 1148 aa6.67□□□□□ -1.34
KIN28YDL108W BDS1Q08347 646 aa6.67□□□□□ -1.34
KIN28YDL108W SPT2P06843 333 aaPredicted RBP6.65□□□□□ -1.34
KIN28YDL108W STE6P12866 1290 aa6.65□□□□□ -1.34
KIN28YDL108W VAN1P23642 535 aa6.65□□□□□ -1.34
KIN28YDL108W NTH2P35172 780 aa6.65□□□□□ -1.34
KIN28YDL108W RTT106P40161 455 aa6.65□□□□□ -1.34
KIN28YDL108W RPS6AP0CX37 236 aaKnown RBP6.64□□□□□ -1.35
KIN28YDL108W RPS6BP0CX38 236 aaPredicted RBP6.64□□□□□ -1.35
KIN28YDL108W DLD3P39976 496 aaKnown RBP6.64□□□□□ -1.35
KIN28YDL108W YML020WQ03722 664 aa6.64□□□□□ -1.35
KIN28YDL108W PUF6Q04373 656 aaKnown RBP6.64□□□□□ -1.35
KIN28YDL108W TRS33Q99394 268 aa6.64□□□□□ -1.35
KIN28YDL108W CYT1P07143 309 aa6.63□□□□□ -1.35
KIN28YDL108W TRK2P28584 889 aa6.63□□□□□ -1.35
KIN28YDL108W SWI5P08153 709 aa6.62□□□□□ -1.35
KIN28YDL108W YLR346CQ06139 101 aa6.62□□□□□ -1.35
KIN28YDL108W WTM2Q12206 467 aa6.62□□□□□ -1.35
KIN28YDL108W SRF1Q12516 437 aa6.62□□□□□ -1.35
KIN28YDL108W YIR007WP40566 764 aa6.61□□□□□ -1.35
KIN28YDL108W YGR035CP53222 116 aa6.61□□□□□ -1.35
KIN28YDL108W PUN1Q06991 263 aa6.61□□□□□ -1.35
KIN28YDL108W HAT1Q12341 374 aa6.61□□□□□ -1.35
KIN28YDL108W CWH41P53008 833 aa6.6□□□□□ -1.35
KIN28YDL108W CWC15Q03772 175 aaKnown RBP6.6□□□□□ -1.35
KIN28YDL108W HPF1Q05164 967 aa6.6□□□□□ -1.35
KIN28YDL108W UBP1P25037 809 aa6.59□□□□□ -1.35
KIN28YDL108W GLY1P37303 387 aaKnown RBP6.59□□□□□ -1.35
KIN28YDL108W TPS3P38426 1054 aaKnown RBP6.59□□□□□ -1.35
KIN28YDL108W KAR5Q04746 504 aa6.59□□□□□ -1.35
KIN28YDL108W ARG82P07250 355 aa6.58□□□□□ -1.36
KIN28YDL108W SRS2P12954 1174 aa6.58□□□□□ -1.36
KIN28YDL108W UTP7P40055 554 aaKnown RBP6.58□□□□□ -1.36
KIN28YDL108W NUP85P46673 744 aa6.58□□□□□ -1.36
KIN28YDL108W PNP1Q05788 311 aa6.58□□□□□ -1.36
KIN28YDL108W SSF1P38789 453 aaPredicted RBP6.57□□□□□ -1.36
KIN28YDL108W YRB30P53107 440 aaPredicted RBP6.57□□□□□ -1.36
KIN28YDL108W TY1A-BLQ12266 440 aa6.57□□□□□ -1.36
KIN28YDL108W AAD14P42884 376 aa6.56□□□□□ -1.36
KIN28YDL108W ALD4P46367 519 aaKnown RBP6.56□□□□□ -1.36
KIN28YDL108W FUR4P05316 633 aaKnown RBP6.55□□□□□ -1.36
KIN28YDL108W SLD2P34252 453 aa6.55□□□□□ -1.36
KIN28YDL108W SUM1P46676 1062 aa6.55□□□□□ -1.36
KIN28YDL108W SCW11P53189 542 aa6.55□□□□□ -1.36
KIN28YDL108W NOP8Q08287 484 aaPredicted RBP6.55□□□□□ -1.36
KIN28YDL108W NGR1P32831 672 aaKnown RBP6.54□□□□□ -1.36
KIN28YDL108W RRN6P32786 894 aa6.53□□□□□ -1.36
KIN28YDL108W ALA1P40825 983 aaKnown RBP6.53□□□□□ -1.36
KIN28YDL108W FOX2Q02207 900 aaKnown RBP6.53□□□□□ -1.36
KIN28YDL108W YBL113CQ7M4S9 792 aa6.53□□□□□ -1.36
KIN28YDL108W SUV3P32580 737 aa6.52□□□□□ -1.37
KIN28YDL108W MCM1P11746 286 aa6.51□□□□□ -1.37
KIN28YDL108W BOL3P39724 118 aa6.51□□□□□ -1.37
KIN28YDL108W YPQ2Q06328 317 aa6.51□□□□□ -1.37
KIN28YDL108W DLD1P32891 587 aa6.5□□□□□ -1.37
KIN28YDL108W ERP5P38819 212 aa6.5□□□□□ -1.37
KIN28YDL108W GRS1P38088 690 aaKnown RBP6.49□□□□□ -1.37
KIN28YDL108W ATG1P53104 897 aa6.49□□□□□ -1.37
KIN28YDL108W CAB1Q04430 367 aa6.49□□□□□ -1.37
KIN28YDL108W ISC10P32645 267 aa6.48□□□□□ -1.37
KIN28YDL108W SCD5P34758 872 aa6.48□□□□□ -1.37
KIN28YDL108W AHP1P38013 176 aaKnown RBP6.48□□□□□ -1.37
KIN28YDL108W GLO3P38682 493 aaKnown RBP6.48□□□□□ -1.37
KIN28YDL108W LSC2P53312 427 aa6.48□□□□□ -1.37
KIN28YDL108W YBR197CP38306 217 aa6.47□□□□□ -1.37
KIN28YDL108W STM1P39015 273 aaKnown RBP6.47□□□□□ -1.37
KIN28YDL108W MSN5P52918 1224 aa6.47□□□□□ -1.37
KIN28YDL108W SSN3P39073 555 aa6.46□□□□□ -1.38
KIN28YDL108W JJJ2P46997 583 aa6.46□□□□□ -1.38
KIN28YDL108W HXT5P38695 592 aa6.45□□□□□ -1.38
KIN28YDL108W QDR1P40475 563 aa6.45□□□□□ -1.38
KIN28YDL108W YJR098CP47139 656 aa6.45□□□□□ -1.38
KIN28YDL108W TRL1P09880 827 aaKnown RBP6.44□□□□□ -1.38
KIN28YDL108W YTA6P40328 754 aa6.44□□□□□ -1.38
KIN28YDL108W LSO1Q3E827 93 aa6.44□□□□□ -1.38
KIN28YDL108W Q0182Q9ZZW1 134 aa6.44□□□□□ -1.38
KIN28YDL108W MRPL33P20084 86 aa6.43□□□□□ -1.38
KIN28YDL108W SEC20P28791 383 aa6.43□□□□□ -1.38
KIN28YDL108W VTC4P47075 721 aa6.43□□□□□ -1.38
KIN28YDL108W UBP2Q01476 1272 aa6.43□□□□□ -1.38
KIN28YDL108W SEN54Q02825 467 aaPredicted RBP6.43□□□□□ -1.38
KIN28YDL108W UTP4Q06679 776 aaKnown RBP6.43□□□□□ -1.38
KIN28YDL108W MLF3P32047 452 aa6.42□□□□□ -1.38
KIN28YDL108W DAL1P32375 460 aa6.42□□□□□ -1.38
KIN28YDL108W BOI1P38041 980 aaKnown RBP6.42□□□□□ -1.38
KIN28YDL108W YHL050CP38721 697 aa6.42□□□□□ -1.38
KIN28YDL108W YHR219WP38900 624 aa6.42□□□□□ -1.38
KIN28YDL108W ICP55P40051 511 aa6.42□□□□□ -1.38
KIN28YDL108W TCB1Q12466 1186 aa6.42□□□□□ -1.38
KIN28YDL108W IRE1P32361 1115 aa6.41□□□□□ -1.38
KIN28YDL108W SPR3P41901 512 aa6.41□□□□□ -1.38
KIN28YDL108W MDJ2P42834 146 aa6.41□□□□□ -1.38
KIN28YDL108W ROG3P43602 733 aa6.41□□□□□ -1.38
KIN28YDL108W ACF4P47129 309 aa6.41□□□□□ -1.38
KIN28YDL108W YNL165WP53891 406 aa6.41□□□□□ -1.38
KIN28YDL108W RPB10P22139 70 aa6.4□□□□□ -1.38
KIN28YDL108W SHM1P37292 490 aaPredicted RBP6.4□□□□□ -1.38
KIN28YDL108W IPL1P38991 367 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms