RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	GUT2	P32191	649 aa		5.28	□□□□□ -1.56
SRD1	YCR018C	SSN3	P39073	555 aa		5.28	□□□□□ -1.56
SRD1	YCR018C	MSN5	P52918	1224 aa		5.28	□□□□□ -1.56
SRD1	YCR018C	TIF1	P10081	395 aa	Known RBP	5.27	□□□□□ -1.57
SRD1	YCR018C	TY1A-DR3	Q12441	440 aa		5.27	□□□□□ -1.57
SRD1	YCR018C	GLT1	Q12680	2145 aa	Known RBP	5.26	□□□□□ -1.57
SRD1	YCR018C	AMN1	P38285	549 aa	Predicted RBP	5.26	□□□□□ -1.57
SRD1	YCR018C	YDR215C	Q12240	137 aa		5.26	□□□□□ -1.57
SRD1	YCR018C	GPM1	P00950	247 aa	Known RBP	5.25	□□□□□ -1.57
SRD1	YCR018C	BIO2	P32451	375 aa		5.25	□□□□□ -1.57
SRD1	YCR018C	RTG2	P32608	588 aa	Known RBP	5.25	□□□□□ -1.57
SRD1	YCR018C	SLN1	P39928	1220 aa	Predicted RBP	5.25	□□□□□ -1.57
SRD1	YCR018C	BOI2	P39969	1040 aa		5.25	□□□□□ -1.57
SRD1	YCR018C	YNL108C	P53929	270 aa		5.25	□□□□□ -1.57
SRD1	YCR018C	SSA4	P22202	642 aa	Known RBP	5.23	□□□□□ -1.57
SRD1	YCR018C	LSB6	P42951	607 aa		5.23	□□□□□ -1.57
SRD1	YCR018C	MCA1	Q08601	432 aa		5.23	□□□□□ -1.57
SRD1	YCR018C	WTM2	Q12206	467 aa		5.23	□□□□□ -1.57
SRD1	YCR018C	SPT5	P27692	1063 aa	Known RBP	5.22	□□□□□ -1.57
SRD1	YCR018C	AHP1	P38013	176 aa	Known RBP	5.22	□□□□□ -1.57
SRD1	YCR018C	MAK16	P10962	306 aa	Predicted RBP	5.21	□□□□□ -1.58
SRD1	YCR018C	STE20	Q03497	939 aa	Known RBP	5.21	□□□□□ -1.58
SRD1	YCR018C	FRA1	Q07825	749 aa		5.21	□□□□□ -1.58
SRD1	YCR018C	FPS1	P23900	669 aa		5.2	□□□□□ -1.58
SRD1	YCR018C	SSA1	P10591	642 aa	Known RBP	5.19	□□□□□ -1.58
SRD1	YCR018C	SUP45	P12385	437 aa	Known RBP	5.19	□□□□□ -1.58
SRD1	YCR018C	DAT1	P13483	248 aa	Known RBP	5.19	□□□□□ -1.58
SRD1	YCR018C	YDJ1	P25491	409 aa	Known RBP	5.19	□□□□□ -1.58
SRD1	YCR018C	SUB2	Q07478	446 aa	Known RBP	5.19	□□□□□ -1.58
SRD1	YCR018C	SPT2	P06843	333 aa	Predicted RBP	5.18	□□□□□ -1.58
SRD1	YCR018C	CPS1	P27614	576 aa		5.18	□□□□□ -1.58
SRD1	YCR018C	MAC1	P35192	417 aa		5.18	□□□□□ -1.58
SRD1	YCR018C	MET1	P36150	593 aa		5.18	□□□□□ -1.58
SRD1	YCR018C	ENO2	P00925	437 aa	Known RBP	5.17	□□□□□ -1.58
SRD1	YCR018C	TTI1	P36097	1038 aa		5.17	□□□□□ -1.58
SRD1	YCR018C	TAT1	P38085	619 aa		5.17	□□□□□ -1.58
SRD1	YCR018C	YPP1	P46951	817 aa		5.17	□□□□□ -1.58
SRD1	YCR018C	ISR1	Q06098	443 aa	Known RBP	5.17	□□□□□ -1.58
SRD1	YCR018C	UTR2	P32623	467 aa		5.16	□□□□□ -1.58
SRD1	YCR018C	UTP7	P40055	554 aa	Known RBP	5.16	□□□□□ -1.58
SRD1	YCR018C	NAF1	P53919	492 aa	Known RBP	5.16	□□□□□ -1.58
SRD1	YCR018C	ENO1	P00924	437 aa	Known RBP	5.15	□□□□□ -1.59
SRD1	YCR018C	SIS2	P36024	562 aa		5.15	□□□□□ -1.59
SRD1	YCR018C	GEF1	P37020	779 aa		5.15	□□□□□ -1.59
SRD1	YCR018C	PDC5	P16467	563 aa	Known RBP	5.14	□□□□□ -1.59
SRD1	YCR018C	KNS1	P32350	737 aa	Predicted RBP	5.14	□□□□□ -1.59
SRD1	YCR018C	IRE1	P32361	1115 aa		5.14	□□□□□ -1.59
SRD1	YCR018C	MRPL16	P38064	232 aa		5.14	□□□□□ -1.59
SRD1	YCR018C	ALA1	P40825	983 aa	Known RBP	5.14	□□□□□ -1.59
SRD1	YCR018C	JJJ2	P46997	583 aa		5.14	□□□□□ -1.59
SRD1	YCR018C	RPL34A	P87262	121 aa	Predicted RBP	5.14	□□□□□ -1.59
SRD1	YCR018C	TBS1	P38114	1094 aa		5.13	□□□□□ -1.59
SRD1	YCR018C	PRY1	P47032	299 aa		5.13	□□□□□ -1.59
SRD1	YCR018C	RIM21	P48565	533 aa		5.13	□□□□□ -1.59
SRD1	YCR018C	SHM1	P37292	490 aa	Predicted RBP	5.12	□□□□□ -1.59
SRD1	YCR018C	SUM1	P46676	1062 aa		5.12	□□□□□ -1.59
SRD1	YCR018C	ALO1	P54783	526 aa	Known RBP	5.12	□□□□□ -1.59
SRD1	YCR018C	YPL034W	Q03083	165 aa		5.12	□□□□□ -1.59
SRD1	YCR018C	MRX10	Q05648	414 aa		5.12	□□□□□ -1.59
SRD1	YCR018C	MCM16	Q12262	181 aa		5.12	□□□□□ -1.59
SRD1	YCR018C	APL6	P46682	809 aa		5.11	□□□□□ -1.59
SRD1	YCR018C	PSH1	Q12161	406 aa		5.11	□□□□□ -1.59
SRD1	YCR018C	ISF1	P32488	338 aa		5.1	□□□□□ -1.59
SRD1	YCR018C	IRC24	P40580	263 aa		5.1	□□□□□ -1.59
SRD1	YCR018C	EMP47	P43555	445 aa		5.1	□□□□□ -1.59
SRD1	YCR018C	MRX12	P47084	519 aa		5.1	□□□□□ -1.59
SRD1	YCR018C	PDC6	P26263	563 aa	Known RBP	5.09	□□□□□ -1.59
SRD1	YCR018C	HAL5	P38970	855 aa	Known RBP	5.09	□□□□□ -1.59
SRD1	YCR018C	KTR7	P40504	517 aa		5.09	□□□□□ -1.59
SRD1	YCR018C	TY1A-DR2	Q03964	440 aa	Known RBP	5.09	□□□□□ -1.59
SRD1	YCR018C	STB3	Q12427	513 aa		5.09	□□□□□ -1.59
SRD1	YCR018C	SLX8	P40072	274 aa		5.08	□□□□□ -1.6
SRD1	YCR018C	ATG3	P40344	310 aa		5.08	□□□□□ -1.6
SRD1	YCR018C	SPR3	P41901	512 aa		5.08	□□□□□ -1.6
SRD1	YCR018C	NOB1	Q08444	459 aa	Known RBP	5.08	□□□□□ -1.6
SRD1	YCR018C	OMA1	P36163	345 aa		5.07	□□□□□ -1.6
SRD1	YCR018C	TGL4	P36165	910 aa		5.07	□□□□□ -1.6
SRD1	YCR018C	PUP1	P25043	261 aa		5.06	□□□□□ -1.6
SRD1	YCR018C	INP52	P50942	1183 aa		5.06	□□□□□ -1.6
SRD1	YCR018C	ECM23	Q02710	187 aa		5.05	□□□□□ -1.6
SRD1	YCR018C	RPS31	P05759	152 aa	Known RBP	5.04	□□□□□ -1.6
SRD1	YCR018C	RDS2	P19541	446 aa	Known RBP	5.04	□□□□□ -1.6
SRD1	YCR018C	CDC3	P32457	520 aa	Known RBP	5.04	□□□□□ -1.6
SRD1	YCR018C	PEP12	P32854	288 aa		5.04	□□□□□ -1.6
SRD1	YCR018C	YML020W	Q03722	664 aa		5.04	□□□□□ -1.6
SRD1	YCR018C	YML083C	Q04526	418 aa		5.04	□□□□□ -1.6
SRD1	YCR018C	TPS3	P38426	1054 aa	Known RBP	5.02	□□□□□ -1.61
SRD1	YCR018C	SOH1	P38633	127 aa		5.02	□□□□□ -1.61
SRD1	YCR018C	MSC7	P38694	644 aa		5.02	□□□□□ -1.61
SRD1	YCR018C	HDA3	Q06623	655 aa		5.02	□□□□□ -1.61
SRD1	YCR018C	GAL2	P13181	574 aa		5.01	□□□□□ -1.61
SRD1	YCR018C	UBX7	P38349	436 aa		5.01	□□□□□ -1.61
SRD1	YCR018C	UTP13	Q05946	817 aa	Known RBP	5.01	□□□□□ -1.61
SRD1	YCR018C	SLD2	P34252	453 aa		5	□□□□□ -1.61
SRD1	YCR018C	BUD9	P53226	547 aa		5	□□□□□ -1.61
SRD1	YCR018C	LEU1	P07264	779 aa	Known RBP	4.99	□□□□□ -1.61
SRD1	YCR018C	HAP4	P14064	554 aa		4.99	□□□□□ -1.61
SRD1	YCR018C	PHO87	P25360	923 aa		4.98	□□□□□ -1.61
SRD1	YCR018C	NHA1	Q99271	985 aa		4.98	□□□□□ -1.61
SRD1	YCR018C	PGM2	P37012	569 aa	Known RBP	4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms