RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	NAF1	P53919	492 aa	Known RBP	3.89	□□□□□ -1.79
LRE1	YCL051W	DAT1	P13483	248 aa	Known RBP	3.88	□□□□□ -1.79
LRE1	YCL051W	PDC5	P16467	563 aa	Known RBP	3.88	□□□□□ -1.79
LRE1	YCL051W	JJJ2	P46997	583 aa		3.88	□□□□□ -1.79
LRE1	YCL051W	UTR2	P32623	467 aa		3.87	□□□□□ -1.79
LRE1	YCL051W	UTP7	P40055	554 aa	Known RBP	3.87	□□□□□ -1.79
LRE1	YCL051W	PRY1	P47032	299 aa		3.87	□□□□□ -1.79
LRE1	YCL051W	ISR1	Q06098	443 aa	Known RBP	3.87	□□□□□ -1.79
LRE1	YCL051W	AIM7	Q12156	149 aa		3.87	□□□□□ -1.79
LRE1	YCL051W	IRE1	P32361	1115 aa		3.86	□□□□□ -1.79
LRE1	YCL051W	SHM1	P37292	490 aa	Predicted RBP	3.86	□□□□□ -1.79
LRE1	YCL051W	MRPL16	P38064	232 aa		3.86	□□□□□ -1.79
LRE1	YCL051W	IRC24	P40580	263 aa		3.86	□□□□□ -1.79
LRE1	YCL051W	APL6	P46682	809 aa		3.86	□□□□□ -1.79
LRE1	YCL051W	SUM1	P46676	1062 aa		3.86	□□□□□ -1.79
LRE1	YCL051W	ALO1	P54783	526 aa	Known RBP	3.86	□□□□□ -1.79
LRE1	YCL051W	YPL034W	Q03083	165 aa		3.86	□□□□□ -1.79
LRE1	YCL051W	INP52	P50942	1183 aa		3.85	□□□□□ -1.79
LRE1	YCL051W	ALA1	P40825	983 aa	Known RBP	3.84	□□□□□ -1.79
LRE1	YCL051W	TY1A-DR2	Q03964	440 aa	Known RBP	3.84	□□□□□ -1.79
LRE1	YCL051W	PSH1	Q12161	406 aa		3.84	□□□□□ -1.79
LRE1	YCL051W	TBS1	P38114	1094 aa		3.84	□□□□□ -1.8
LRE1	YCL051W	HAL5	P38970	855 aa	Known RBP	3.84	□□□□□ -1.8
LRE1	YCL051W	SPR3	P41901	512 aa		3.84	□□□□□ -1.8
LRE1	YCL051W	PDC6	P26263	563 aa	Known RBP	3.83	□□□□□ -1.8
LRE1	YCL051W	MRX12	P47084	519 aa		3.83	□□□□□ -1.8
LRE1	YCL051W	STB3	Q12427	513 aa		3.83	□□□□□ -1.8
LRE1	YCL051W	DMA1	P38823	416 aa		3.82	□□□□□ -1.8
LRE1	YCL051W	OMA1	P36163	345 aa		3.81	□□□□□ -1.8
LRE1	YCL051W	SLX8	P40072	274 aa		3.81	□□□□□ -1.8
LRE1	YCL051W	EMP47	P43555	445 aa		3.81	□□□□□ -1.8
LRE1	YCL051W	ISF1	P32488	338 aa		3.81	□□□□□ -1.8
LRE1	YCL051W	RPS31	P05759	152 aa	Known RBP	3.8	□□□□□ -1.8
LRE1	YCL051W	MSC7	P38694	644 aa		3.8	□□□□□ -1.8
LRE1	YCL051W	TPS3	P38426	1054 aa	Known RBP	3.79	□□□□□ -1.8
LRE1	YCL051W	MCM16	Q12262	181 aa		3.79	□□□□□ -1.8
LRE1	YCL051W	SSA2	P10592	639 aa	Known RBP	3.79	□□□□□ -1.8
LRE1	YCL051W	BUD9	P53226	547 aa		3.78	□□□□□ -1.8
LRE1	YCL051W	LEU1	P07264	779 aa	Known RBP	3.77	□□□□□ -1.81
LRE1	YCL051W	HDA3	Q06623	655 aa		3.77	□□□□□ -1.81
LRE1	YCL051W	YPQ2	Q06328	317 aa		3.76	□□□□□ -1.81
LRE1	YCL051W	ALD2	P47771	506 aa		3.76	□□□□□ -1.81
LRE1	YCL051W	PGM1	P33401	570 aa	Known RBP	3.75	□□□□□ -1.81
LRE1	YCL051W	CSE4	P36012	229 aa		3.75	□□□□□ -1.81
LRE1	YCL051W	AVT1	P47082	602 aa		3.75	□□□□□ -1.81
LRE1	YCL051W	NHA1	Q99271	985 aa		3.75	□□□□□ -1.81
LRE1	YCL051W	PGM2	P37012	569 aa	Known RBP	3.74	□□□□□ -1.81
LRE1	YCL051W	HPC2	Q01448	625 aa		3.74	□□□□□ -1.81
LRE1	YCL051W	UTP13	Q05946	817 aa	Known RBP	3.74	□□□□□ -1.81
LRE1	YCL051W	AI3	P03877	415 aa		3.73	□□□□□ -1.81
LRE1	YCL051W	RPP1A	P05318	106 aa	Predicted RBP	3.73	□□□□□ -1.81
LRE1	YCL051W	RGP1	P16664	663 aa		3.73	□□□□□ -1.81
LRE1	YCL051W	SPT5	P27692	1063 aa	Known RBP	3.73	□□□□□ -1.81
LRE1	YCL051W	SOH1	P38633	127 aa		3.73	□□□□□ -1.81
LRE1	YCL051W	ALG14	P38242	237 aa		3.72	□□□□□ -1.81
LRE1	YCL051W	YDJ1	P25491	409 aa	Known RBP	3.71	□□□□□ -1.81
LRE1	YCL051W	YNL165W	P53891	406 aa		3.71	□□□□□ -1.81
LRE1	YCL051W	SWI5	P08153	709 aa		3.71	□□□□□ -1.82
LRE1	YCL051W	NAR1	P23503	491 aa	Known RBP	3.7	□□□□□ -1.82
LRE1	YCL051W	ATG3	P40344	310 aa		3.7	□□□□□ -1.82
LRE1	YCL051W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.7	□□□□□ -1.82	not detected
LRE1	YCL051W	SAC7	P17121	654 aa		3.69	□□□□□ -1.82
LRE1	YCL051W	PRK1	P40494	810 aa		3.69	□□□□□ -1.82
LRE1	YCL051W	GAS5	Q08193	484 aa		3.69	□□□□□ -1.82
LRE1	YCL051W	TRP3	P00937	484 aa		3.68	□□□□□ -1.82
LRE1	YCL051W	YKR073C	P36153	106 aa		3.68	□□□□□ -1.82
LRE1	YCL051W	ARI1	P53111	347 aa	Known RBP	3.68	□□□□□ -1.82
LRE1	YCL051W	HEH2	Q03281	663 aa		3.68	□□□□□ -1.82
LRE1	YCL051W	GIS4	Q04233	774 aa		3.68	□□□□□ -1.82
LRE1	YCL051W	AOS1	Q06624	347 aa		3.68	□□□□□ -1.82
LRE1	YCL051W	TFB3	Q03290	321 aa		3.68	□□□□□ -1.82
LRE1	YCL051W	MED7	Q08278	222 aa		3.68	□□□□□ -1.82
LRE1	YCL051W	MCM1	P11746	286 aa		3.67	□□□□□ -1.82
LRE1	YCL051W	MLF3	P32047	452 aa		3.66	□□□□□ -1.82
LRE1	YCL051W	RRM3	P38766	723 aa		3.66	□□□□□ -1.82
LRE1	YCL051W	YTA6	P40328	754 aa		3.66	□□□□□ -1.82
LRE1	YCL051W	SFA1	P32771	386 aa		3.66	□□□□□ -1.82
LRE1	YCL051W	ELM1	P32801	640 aa		3.66	□□□□□ -1.82
LRE1	YCL051W	CTH1	P47976	325 aa		3.66	□□□□□ -1.82
LRE1	YCL051W	KIN1	P13185	1064 aa		3.65	□□□□□ -1.83
LRE1	YCL051W	KAE1	P36132	386 aa		3.65	□□□□□ -1.83
LRE1	YCL051W	YBL036C	P38197	257 aa		3.65	□□□□□ -1.83
LRE1	YCL051W	AIM9	P40053	627 aa	Known RBP	3.65	□□□□□ -1.83
LRE1	YCL051W	YLR122C	Q12312	125 aa		3.65	□□□□□ -1.83
LRE1	YCL051W	RPS6A	P0CX37	236 aa	Known RBP	3.64	□□□□□ -1.83
LRE1	YCL051W	RPS6B	P0CX38	236 aa	Predicted RBP	3.64	□□□□□ -1.83
LRE1	YCL051W	YPP1	P46951	817 aa		3.64	□□□□□ -1.83
LRE1	YCL051W	COQ2	P32378	372 aa		3.63	□□□□□ -1.83
LRE1	YCL051W	LIP5	P32875	414 aa		3.63	□□□□□ -1.83
LRE1	YCL051W	Q0182	Q9ZZW1	134 aa		3.63	□□□□□ -1.83
LRE1	YCL051W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.63	□□□□□ -1.83	not detected
LRE1	YCL051W	TOS1	P38288	455 aa		3.63	□□□□□ -1.83
LRE1	YCL051W	GUA1	P38625	525 aa	Known RBP	3.63	□□□□□ -1.83
LRE1	YCL051W	SKP1	P52286	194 aa		3.63	□□□□□ -1.83
LRE1	YCL051W	NCL1	P38205	684 aa	Known RBP	3.61	□□□□□ -1.83
LRE1	YCL051W	SUP45	P12385	437 aa	Known RBP	3.61	□□□□□ -1.83
LRE1	YCL051W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.61	□□□□□ -1.83	not detected
LRE1	YCL051W	NTH2	P35172	780 aa		3.61	□□□□□ -1.83
LRE1	YCL051W	MTO1	P53070	669 aa		3.61	□□□□□ -1.83
LRE1	YCL051W	BRE4	Q07660	1125 aa		3.61	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms