RNA–Protein interactions for RNA: YBR216C

YBP1, Transcript of Protein involved in cellular response to oxidative stress, yeast

Gene YBP1, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBP1	YBR216C	PHM7	Q12252	991 aa		4.64	□□□□□ -1.67
YBP1	YBR216C	SLX8	P40072	274 aa		4.63	□□□□□ -1.67
YBP1	YBR216C	HDA3	Q06623	655 aa		4.63	□□□□□ -1.67
YBP1	YBR216C	TY1A-DR3	Q12441	440 aa		4.63	□□□□□ -1.67
YBP1	YBR216C	DIT1	P21623	536 aa		4.63	□□□□□ -1.67
YBP1	YBR216C	SUM1	P46676	1062 aa		4.63	□□□□□ -1.67
YBP1	YBR216C	MDJ1	P35191	511 aa		4.62	□□□□□ -1.67
YBP1	YBR216C	YJL007C	P47080	104 aa		4.62	□□□□□ -1.67
YBP1	YBR216C	NSG2	P53898	299 aa		4.62	□□□□□ -1.67
YBP1	YBR216C	AI1	P03875	834 aa		4.61	□□□□□ -1.67
YBP1	YBR216C	RIM21	P48565	533 aa		4.61	□□□□□ -1.67
YBP1	YBR216C	KRE33	P53914	1056 aa	Known RBP	4.61	□□□□□ -1.67
YBP1	YBR216C	SYT1	Q06836	1226 aa		4.61	□□□□□ -1.67
YBP1	YBR216C	JJJ2	P46997	583 aa		4.6	□□□□□ -1.67
YBP1	YBR216C	ADE12	P80210	433 aa	Known RBP	4.6	□□□□□ -1.67
YBP1	YBR216C	THI72	Q08579	599 aa		4.6	□□□□□ -1.67
YBP1	YBR216C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
YBP1	YBR216C	YDR461C-A	Q2V2P7	80 aa		4.6	□□□□□ -1.67
YBP1	YBR216C	IRE1	P32361	1115 aa		4.59	□□□□□ -1.67
YBP1	YBR216C	RDS2	P19541	446 aa	Known RBP	4.58	□□□□□ -1.68
YBP1	YBR216C	LSB3	P43603	459 aa	Known RBP	4.58	□□□□□ -1.68
YBP1	YBR216C	SWI5	P08153	709 aa		4.57	□□□□□ -1.68
YBP1	YBR216C	SHM1	P37292	490 aa	Predicted RBP	4.57	□□□□□ -1.68
YBP1	YBR216C	AIM9	P40053	627 aa	Known RBP	4.57	□□□□□ -1.68
YBP1	YBR216C	YFL066C	P43538	392 aa		4.57	□□□□□ -1.68
YBP1	YBR216C	HGH1	P48362	394 aa	Known RBP	4.57	□□□□□ -1.68
YBP1	YBR216C	BIM1	P40013	344 aa		4.56	□□□□□ -1.68
YBP1	YBR216C	YFL034W	P43564	1073 aa		4.56	□□□□□ -1.68
YBP1	YBR216C	ATG32	P40458	529 aa		4.55	□□□□□ -1.68
YBP1	YBR216C	RPL34B	P40525	121 aa	Known RBP	4.55	□□□□□ -1.68
YBP1	YBR216C	PSH1	Q12161	406 aa		4.55	□□□□□ -1.68
YBP1	YBR216C	ENO1	P00924	437 aa	Known RBP	4.55	□□□□□ -1.68
YBP1	YBR216C	FPS1	P23900	669 aa		4.55	□□□□□ -1.68
YBP1	YBR216C	PDC6	P26263	563 aa	Known RBP	4.55	□□□□□ -1.68
YBP1	YBR216C	MRX10	Q05648	414 aa		4.55	□□□□□ -1.68
YBP1	YBR216C	YPQ2	Q06328	317 aa		4.55	□□□□□ -1.68
YBP1	YBR216C	RPS6A	P0CX37	236 aa	Known RBP	4.54	□□□□□ -1.68
YBP1	YBR216C	RPS6B	P0CX38	236 aa	Predicted RBP	4.54	□□□□□ -1.68
YBP1	YBR216C	TIF1	P10081	395 aa	Known RBP	4.54	□□□□□ -1.68
YBP1	YBR216C	MRPL16	P38064	232 aa		4.54	□□□□□ -1.68
YBP1	YBR216C	RTG2	P32608	588 aa	Known RBP	4.53	□□□□□ -1.68
YBP1	YBR216C	SBE2	P42223	864 aa	Known RBP	4.53	□□□□□ -1.68
YBP1	YBR216C	STB3	Q12427	513 aa		4.53	□□□□□ -1.68
YBP1	YBR216C	YPR053C	Q6Q5F3	151 aa		4.53	□□□□□ -1.68
YBP1	YBR216C	PDI1	P17967	522 aa	Known RBP	4.52	□□□□□ -1.69
YBP1	YBR216C	NTH2	P35172	780 aa		4.52	□□□□□ -1.69
YBP1	YBR216C	GPM1	P00950	247 aa	Known RBP	4.51	□□□□□ -1.69
YBP1	YBR216C	RPS31	P05759	152 aa	Known RBP	4.51	□□□□□ -1.69
YBP1	YBR216C	YNR014W	P53719	212 aa		4.51	□□□□□ -1.69
YBP1	YBR216C	TDA6	Q06466	467 aa		4.51	□□□□□ -1.69
YBP1	YBR216C	MCM1	P11746	286 aa		4.51	□□□□□ -1.69
YBP1	YBR216C	YTA6	P40328	754 aa		4.51	□□□□□ -1.69
YBP1	YBR216C	TSC13	Q99190	310 aa		4.51	□□□□□ -1.69
YBP1	YBR216C	LEU1	P07264	779 aa	Known RBP	4.5	□□□□□ -1.69
YBP1	YBR216C	CCT8	P47079	568 aa	Known RBP	4.5	□□□□□ -1.69
YBP1	YBR216C	PEP12	P32854	288 aa		4.49	□□□□□ -1.69
YBP1	YBR216C	SPR3	P41901	512 aa		4.49	□□□□□ -1.69
YBP1	YBR216C	YNL165W	P53891	406 aa		4.49	□□□□□ -1.69
YBP1	YBR216C	YMR187C	Q03236	431 aa		4.49	□□□□□ -1.69
YBP1	YBR216C	CYT1	P07143	309 aa		4.48	□□□□□ -1.69
YBP1	YBR216C	BOI2	P39969	1040 aa		4.48	□□□□□ -1.69
YBP1	YBR216C	KTR7	P40504	517 aa		4.48	□□□□□ -1.69
YBP1	YBR216C	RPP1A	P05318	106 aa	Predicted RBP	4.47	□□□□□ -1.69
YBP1	YBR216C	MLF3	P32047	452 aa		4.47	□□□□□ -1.69
YBP1	YBR216C	MCX1	P38323	520 aa	Predicted RBP	4.47	□□□□□ -1.69
YBP1	YBR216C	ALD2	P47771	506 aa		4.47	□□□□□ -1.69
YBP1	YBR216C	TY1A-DR2	Q03964	440 aa	Known RBP	4.47	□□□□□ -1.69
YBP1	YBR216C	PDC5	P16467	563 aa	Known RBP	4.46	□□□□□ -1.69
YBP1	YBR216C	RGP1	P16664	663 aa		4.46	□□□□□ -1.69
YBP1	YBR216C	KNS1	P32350	737 aa	Predicted RBP	4.46	□□□□□ -1.69
YBP1	YBR216C	MET1	P36150	593 aa		4.46	□□□□□ -1.69
YBP1	YBR216C	SKN7	P38889	622 aa		4.46	□□□□□ -1.69
YBP1	YBR216C	Q0182	Q9ZZW1	134 aa		4.46	□□□□□ -1.69
YBP1	YBR216C	PHO87	P25360	923 aa		4.45	□□□□□ -1.7
YBP1	YBR216C	ACS2	P52910	683 aa	Known RBP	4.45	□□□□□ -1.7
YBP1	YBR216C	HAP4	P14064	554 aa		4.44	□□□□□ -1.7
YBP1	YBR216C	SIS2	P36024	562 aa		4.43	□□□□□ -1.7
YBP1	YBR216C	MSC7	P38694	644 aa		4.43	□□□□□ -1.7
YBP1	YBR216C	GAS4	Q08271	471 aa		4.43	□□□□□ -1.7
YBP1	YBR216C	SBP1	P10080	294 aa	Known RBP	4.43	□□□□□ -1.7
YBP1	YBR216C	MTO1	P53070	669 aa		4.43	□□□□□ -1.7
YBP1	YBR216C	YCK2	P23292	546 aa	Known RBP	4.42	□□□□□ -1.7
YBP1	YBR216C	UBP1	P25037	809 aa		4.42	□□□□□ -1.7
YBP1	YBR216C	YDR215C	Q12240	137 aa		4.42	□□□□□ -1.7
YBP1	YBR216C	LEO1	P38439	464 aa		4.41	□□□□□ -1.7
YBP1	YBR216C	UTP4	Q06679	776 aa	Known RBP	4.41	□□□□□ -1.7
YBP1	YBR216C	SCD5	P34758	872 aa		4.41	□□□□□ -1.7
YBP1	YBR216C	HEH2	Q03281	663 aa		4.41	□□□□□ -1.7
YBP1	YBR216C	SLN1	P39928	1220 aa	Predicted RBP	4.4	□□□□□ -1.7
YBP1	YBR216C	GAL2	P13181	574 aa		4.39	□□□□□ -1.71
YBP1	YBR216C	NGR1	P32831	672 aa	Known RBP	4.39	□□□□□ -1.71
YBP1	YBR216C	TAT1	P38085	619 aa		4.39	□□□□□ -1.71
YBP1	YBR216C	NCL1	P38205	684 aa	Known RBP	4.39	□□□□□ -1.71
YBP1	YBR216C	ROM1	P53046	1155 aa		4.39	□□□□□ -1.71
YBP1	YBR216C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
YBP1	YBR216C	KAP122	P32767	1081 aa		4.38	□□□□□ -1.71
YBP1	YBR216C	HXT5	P38695	592 aa		4.38	□□□□□ -1.71
YBP1	YBR216C	SKP1	P52286	194 aa		4.38	□□□□□ -1.71
YBP1	YBR216C	VAN1	P23642	535 aa		4.38	□□□□□ -1.71
YBP1	YBR216C	PRK1	P40494	810 aa		4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms