RNA–Protein interactions for RNA: YBR149W

ARA1, Transcript of NADP+ dependent arabinose dehydrogenase, yeastyeast

Gene ARA1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARA1YBR149W TY1A-DR3Q12441 440 aa7.19□□□□□ -1.26
ARA1YBR149W YDR461C-AQ2V2P7 80 aa7.19□□□□□ -1.26
ARA1YBR149W DAT1P13483 248 aaKnown RBP7.18□□□□□ -1.26
ARA1YBR149W YBL036CP38197 257 aa7.18□□□□□ -1.26
ARA1YBR149W ATG32P40458 529 aa7.16□□□□□ -1.26
ARA1YBR149W ISR1Q06098 443 aaKnown RBP7.16□□□□□ -1.26
ARA1YBR149W BIO2P32451 375 aa7.15□□□□□ -1.26
ARA1YBR149W YNR014WP53719 212 aa7.15□□□□□ -1.26
ARA1YBR149W UTR2P32623 467 aa7.14□□□□□ -1.27
ARA1YBR149W CSE4P36012 229 aa7.14□□□□□ -1.27
ARA1YBR149W AHP1P38013 176 aaKnown RBP7.14□□□□□ -1.27
ARA1YBR149W SPT2P06843 333 aaPredicted RBP7.12□□□□□ -1.27
ARA1YBR149W ISF1P32488 338 aa7.12□□□□□ -1.27
ARA1YBR149W UTP7P40055 554 aaKnown RBP7.12□□□□□ -1.27
ARA1YBR149W EMP47P43555 445 aa7.12□□□□□ -1.27
ARA1YBR149W TIF1P10081 395 aaKnown RBP7.1□□□□□ -1.27
ARA1YBR149W TBS1P38114 1094 aa7.1□□□□□ -1.27
ARA1YBR149W MCX1P38323 520 aaPredicted RBP7.1□□□□□ -1.27
ARA1YBR149W ALA1P40825 983 aaKnown RBP7.1□□□□□ -1.27
ARA1YBR149W MRX12P47084 519 aa7.09□□□□□ -1.27
ARA1YBR149W YNL108CP53929 270 aa7.09□□□□□ -1.27
ARA1YBR149W GPM1P00950 247 aaKnown RBP7.08□□□□□ -1.28
ARA1YBR149W APL6P46682 809 aa7.08□□□□□ -1.28
ARA1YBR149W SUP45P12385 437 aaKnown RBP7.07□□□□□ -1.28
ARA1YBR149W YCK2P23292 546 aaKnown RBP7.07□□□□□ -1.28
ARA1YBR149W FPS1P23900 669 aa7.07□□□□□ -1.28
ARA1YBR149W BOI2P39969 1040 aa7.07□□□□□ -1.28
ARA1YBR149W RPL34BP40525 121 aaKnown RBP7.07□□□□□ -1.28
ARA1YBR149W YDJ1P25491 409 aaKnown RBP7.06□□□□□ -1.28
ARA1YBR149W HAL5P38970 855 aaKnown RBP7.06□□□□□ -1.28
ARA1YBR149W SUM1P46676 1062 aa7.06□□□□□ -1.28
ARA1YBR149W MCM16Q12262 181 aa7.06□□□□□ -1.28
ARA1YBR149W SPT5P27692 1063 aaKnown RBP7.05□□□□□ -1.28
ARA1YBR149W IRE1P32361 1115 aa7.05□□□□□ -1.28
ARA1YBR149W JJJ2P46997 583 aa7.05□□□□□ -1.28
ARA1YBR149W SLN1P39928 1220 aaPredicted RBP7.04□□□□□ -1.28
ARA1YBR149W ENO2P00925 437 aaKnown RBP7.03□□□□□ -1.28
ARA1YBR149W RTG2P32608 588 aaKnown RBP7.03□□□□□ -1.28
ARA1YBR149W YDR215CQ12240 137 aa7.03□□□□□ -1.28
ARA1YBR149W SHM1P37292 490 aaPredicted RBP7.02□□□□□ -1.29
ARA1YBR149W MRPL16P38064 232 aa7.02□□□□□ -1.29
ARA1YBR149W MCA1Q08601 432 aa7.01□□□□□ -1.29
ARA1YBR149W AMN1P38285 549 aaPredicted RBP7□□□□□ -1.29
ARA1YBR149W SLX8P40072 274 aa7□□□□□ -1.29
ARA1YBR149W MET1P36150 593 aa6.99□□□□□ -1.29
ARA1YBR149W ENO1P00924 437 aaKnown RBP6.98□□□□□ -1.29
ARA1YBR149W SOH1P38633 127 aa6.98□□□□□ -1.29
ARA1YBR149W LSB6P42951 607 aa6.98□□□□□ -1.29
ARA1YBR149W RIM21P48565 533 aa6.98□□□□□ -1.29
ARA1YBR149W MRX10Q05648 414 aa6.98□□□□□ -1.29
ARA1YBR149W HDA3Q06623 655 aa6.98□□□□□ -1.29
ARA1YBR149W PSH1Q12161 406 aa6.98□□□□□ -1.29
ARA1YBR149W PDC6P26263 563 aaKnown RBP6.97□□□□□ -1.29
ARA1YBR149W TTI1P36097 1038 aa6.97□□□□□ -1.29
ARA1YBR149W SUB2Q07478 446 aaKnown RBP6.97□□□□□ -1.29
ARA1YBR149W STB3Q12427 513 aa6.97□□□□□ -1.29
ARA1YBR149W PDC5P16467 563 aaKnown RBP6.96□□□□□ -1.3
ARA1YBR149W CPS1P27614 576 aa6.96□□□□□ -1.3
ARA1YBR149W KNS1P32350 737 aaPredicted RBP6.96□□□□□ -1.3
ARA1YBR149W TAT1P38085 619 aa6.96□□□□□ -1.3
ARA1YBR149W SPR3P41901 512 aa6.94□□□□□ -1.3
ARA1YBR149W YPP1P46951 817 aa6.94□□□□□ -1.3
ARA1YBR149W SSA4P22202 642 aaKnown RBP6.93□□□□□ -1.3
ARA1YBR149W TY1A-DR2Q03964 440 aaKnown RBP6.93□□□□□ -1.3
ARA1YBR149W UTP13Q05946 817 aaKnown RBP6.93□□□□□ -1.3
ARA1YBR149W RPS31P05759 152 aaKnown RBP6.92□□□□□ -1.3
ARA1YBR149W RDS2P19541 446 aaKnown RBP6.92□□□□□ -1.3
ARA1YBR149W ATG3P40344 310 aa6.92□□□□□ -1.3
ARA1YBR149W GLT1Q12680 2145 aaKnown RBP6.91□□□□□ -1.3
ARA1YBR149W PRY1P47032 299 aa6.91□□□□□ -1.3
ARA1YBR149W PEP12P32854 288 aa6.9□□□□□ -1.3
ARA1YBR149W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
ARA1YBR149W MAC1P35192 417 aa6.89□□□□□ -1.31
ARA1YBR149W SIS2P36024 562 aa6.88□□□□□ -1.31
ARA1YBR149W NOB1Q08444 459 aaKnown RBP6.88□□□□□ -1.31
ARA1YBR149W SSA1P10591 642 aaKnown RBP6.87□□□□□ -1.31
ARA1YBR149W YPQ2Q06328 317 aa6.87□□□□□ -1.31
ARA1YBR149W SWI5P08153 709 aa6.86□□□□□ -1.31
ARA1YBR149W LEU1P07264 779 aaKnown RBP6.85□□□□□ -1.31
ARA1YBR149W PUP1P25043 261 aa6.85□□□□□ -1.31
ARA1YBR149W TGL4P36165 910 aa6.85□□□□□ -1.31
ARA1YBR149W YPL034WQ03083 165 aa6.85□□□□□ -1.31
ARA1YBR149W MSC7P38694 644 aa6.84□□□□□ -1.31
ARA1YBR149W GEF1P37020 779 aa6.83□□□□□ -1.32
ARA1YBR149W ALD2P47771 506 aa6.83□□□□□ -1.32
ARA1YBR149W ALO1P54783 526 aaKnown RBP6.83□□□□□ -1.32
ARA1YBR149W YML083CQ04526 418 aa6.83□□□□□ -1.32
ARA1YBR149W KTR7P40504 517 aa6.82□□□□□ -1.32
ARA1YBR149W YNL165WP53891 406 aa6.82□□□□□ -1.32
ARA1YBR149W AIM9P40053 627 aaKnown RBP6.81□□□□□ -1.32
ARA1YBR149W RPP1AP05318 106 aaPredicted RBP6.8□□□□□ -1.32
ARA1YBR149W RGP1P16664 663 aa6.8□□□□□ -1.32
ARA1YBR149W TPS3P38426 1054 aaKnown RBP6.79□□□□□ -1.32
ARA1YBR149W YTA6P40328 754 aa6.79□□□□□ -1.32
ARA1YBR149W RPS6AP0CX37 236 aaKnown RBP6.78□□□□□ -1.32
ARA1YBR149W RPS6BP0CX38 236 aaPredicted RBP6.78□□□□□ -1.32
ARA1YBR149W ECM23Q02710 187 aa6.78□□□□□ -1.32
ARA1YBR149W NHA1Q99271 985 aa6.78□□□□□ -1.32
ARA1YBR149W GAL2P13181 574 aa6.77□□□□□ -1.33
ARA1YBR149W OMA1P36163 345 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms