RNA–Protein interactions for RNA: YBR039W

ATP3, Transcript of Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase, yeast

Gene ATP3, Length 936 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP3	YBR039W	APL6	P46682	809 aa		5.12	□□□□□ -1.59
ATP3	YBR039W	SLA1	P32790	1244 aa		5.11	□□□□□ -1.59
ATP3	YBR039W	ATG3	P40344	310 aa		5.11	□□□□□ -1.59
ATP3	YBR039W	YNL108C	P53929	270 aa		5.1	□□□□□ -1.59
ATP3	YBR039W	SYT1	Q06836	1226 aa		5.1	□□□□□ -1.59
ATP3	YBR039W	TY1A-DR3	Q12441	440 aa		5.1	□□□□□ -1.59
ATP3	YBR039W	SUM1	P46676	1062 aa		5.09	□□□□□ -1.59
ATP3	YBR039W	YPP1	P46951	817 aa		5.09	□□□□□ -1.59
ATP3	YBR039W	HDA3	Q06623	655 aa		5.09	□□□□□ -1.59
ATP3	YBR039W	YFL066C	P43538	392 aa		5.08	□□□□□ -1.6
ATP3	YBR039W	ENO2	P00925	437 aa	Known RBP	5.07	□□□□□ -1.6
ATP3	YBR039W	IRE1	P32361	1115 aa		5.07	□□□□□ -1.6
ATP3	YBR039W	BIO2	P32451	375 aa		5.07	□□□□□ -1.6
ATP3	YBR039W	SLX8	P40072	274 aa		5.07	□□□□□ -1.6
ATP3	YBR039W	UTP13	Q05946	817 aa	Known RBP	5.07	□□□□□ -1.6
ATP3	YBR039W	SUP45	P12385	437 aa	Known RBP	5.06	□□□□□ -1.6
ATP3	YBR039W	SBE2	P42223	864 aa	Known RBP	5.06	□□□□□ -1.6
ATP3	YBR039W	JJJ2	P46997	583 aa		5.06	□□□□□ -1.6
ATP3	YBR039W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
ATP3	YBR039W	YDR461C-A	Q2V2P7	80 aa		5.06	□□□□□ -1.6
ATP3	YBR039W	FPS1	P23900	669 aa		5.05	□□□□□ -1.6
ATP3	YBR039W	YNR014W	P53719	212 aa		5.05	□□□□□ -1.6
ATP3	YBR039W	YPR053C	Q6Q5F3	151 aa		5.05	□□□□□ -1.6
ATP3	YBR039W	YJL007C	P47080	104 aa		5.04	□□□□□ -1.6
ATP3	YBR039W	MRPL16	P38064	232 aa		5.03	□□□□□ -1.6
ATP3	YBR039W	YMR187C	Q03236	431 aa		5.03	□□□□□ -1.6
ATP3	YBR039W	TDA6	Q06466	467 aa		5.03	□□□□□ -1.6
ATP3	YBR039W	SBP1	P10080	294 aa	Known RBP	5.02	□□□□□ -1.61
ATP3	YBR039W	SHM1	P37292	490 aa	Predicted RBP	5.02	□□□□□ -1.61
ATP3	YBR039W	CCT8	P47079	568 aa	Known RBP	5.02	□□□□□ -1.61
ATP3	YBR039W	STB3	Q12427	513 aa		5.02	□□□□□ -1.61
ATP3	YBR039W	SWI5	P08153	709 aa		5.01	□□□□□ -1.61
ATP3	YBR039W	PDC6	P26263	563 aa	Known RBP	5	□□□□□ -1.61
ATP3	YBR039W	AIM9	P40053	627 aa	Known RBP	5	□□□□□ -1.61
ATP3	YBR039W	PSH1	Q12161	406 aa		5	□□□□□ -1.61
ATP3	YBR039W	RIM21	P48565	533 aa		4.99	□□□□□ -1.61
ATP3	YBR039W	GPM1	P00950	247 aa	Known RBP	4.98	□□□□□ -1.61
ATP3	YBR039W	BOI2	P39969	1040 aa		4.98	□□□□□ -1.61
ATP3	YBR039W	RPS6A	P0CX37	236 aa	Known RBP	4.97	□□□□□ -1.61
ATP3	YBR039W	RPS6B	P0CX38	236 aa	Predicted RBP	4.97	□□□□□ -1.61
ATP3	YBR039W	RDS2	P19541	446 aa	Known RBP	4.97	□□□□□ -1.61
ATP3	YBR039W	NTH2	P35172	780 aa		4.97	□□□□□ -1.61
ATP3	YBR039W	SKN7	P38889	622 aa		4.97	□□□□□ -1.61
ATP3	YBR039W	YFL034W	P43564	1073 aa		4.97	□□□□□ -1.61
ATP3	YBR039W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
ATP3	YBR039W	RPS31	P05759	152 aa	Known RBP	4.96	□□□□□ -1.62
ATP3	YBR039W	PDI1	P17967	522 aa	Known RBP	4.96	□□□□□ -1.62
ATP3	YBR039W	MET1	P36150	593 aa		4.96	□□□□□ -1.62
ATP3	YBR039W	YTA6	P40328	754 aa		4.96	□□□□□ -1.62
ATP3	YBR039W	YPQ2	Q06328	317 aa		4.96	□□□□□ -1.62
ATP3	YBR039W	RTG2	P32608	588 aa	Known RBP	4.95	□□□□□ -1.62
ATP3	YBR039W	BIM1	P40013	344 aa		4.95	□□□□□ -1.62
ATP3	YBR039W	RPL34B	P40525	121 aa	Known RBP	4.95	□□□□□ -1.62
ATP3	YBR039W	SPR3	P41901	512 aa		4.95	□□□□□ -1.62
ATP3	YBR039W	ENO1	P00924	437 aa	Known RBP	4.94	□□□□□ -1.62
ATP3	YBR039W	MCX1	P38323	520 aa	Predicted RBP	4.94	□□□□□ -1.62
ATP3	YBR039W	ATG32	P40458	529 aa		4.94	□□□□□ -1.62
ATP3	YBR039W	HGH1	P48362	394 aa	Known RBP	4.94	□□□□□ -1.62
ATP3	YBR039W	TIF1	P10081	395 aa	Known RBP	4.93	□□□□□ -1.62
ATP3	YBR039W	PDC5	P16467	563 aa	Known RBP	4.93	□□□□□ -1.62
ATP3	YBR039W	YNL165W	P53891	406 aa		4.93	□□□□□ -1.62
ATP3	YBR039W	Q0182	Q9ZZW1	134 aa		4.93	□□□□□ -1.62
ATP3	YBR039W	LEU1	P07264	779 aa	Known RBP	4.92	□□□□□ -1.62
ATP3	YBR039W	KNS1	P32350	737 aa	Predicted RBP	4.92	□□□□□ -1.62
ATP3	YBR039W	TY1A-DR2	Q03964	440 aa	Known RBP	4.92	□□□□□ -1.62
ATP3	YBR039W	RPP1A	P05318	106 aa	Predicted RBP	4.91	□□□□□ -1.62
ATP3	YBR039W	RGP1	P16664	663 aa		4.91	□□□□□ -1.62
ATP3	YBR039W	YCK2	P23292	546 aa	Known RBP	4.91	□□□□□ -1.62
ATP3	YBR039W	MLF3	P32047	452 aa		4.91	□□□□□ -1.62
ATP3	YBR039W	SLN1	P39928	1220 aa	Predicted RBP	4.91	□□□□□ -1.62
ATP3	YBR039W	KTR7	P40504	517 aa		4.91	□□□□□ -1.62
ATP3	YBR039W	MRX10	Q05648	414 aa		4.91	□□□□□ -1.62
ATP3	YBR039W	TSC13	Q99190	310 aa		4.91	□□□□□ -1.62
ATP3	YBR039W	MCM1	P11746	286 aa		4.9	□□□□□ -1.63
ATP3	YBR039W	TAT1	P38085	619 aa		4.9	□□□□□ -1.63
ATP3	YBR039W	ALD2	P47771	506 aa		4.9	□□□□□ -1.63
ATP3	YBR039W	YDR215C	Q12240	137 aa		4.9	□□□□□ -1.63
ATP3	YBR039W	CYT1	P07143	309 aa		4.89	□□□□□ -1.63
ATP3	YBR039W	MCA1	Q08601	432 aa		4.89	□□□□□ -1.63
ATP3	YBR039W	LSB6	P42951	607 aa		4.88	□□□□□ -1.63
ATP3	YBR039W	MTO1	P53070	669 aa		4.88	□□□□□ -1.63
ATP3	YBR039W	MSC7	P38694	644 aa		4.87	□□□□□ -1.63
ATP3	YBR039W	PRY1	P47032	299 aa		4.87	□□□□□ -1.63
ATP3	YBR039W	AMN1	P38285	549 aa	Predicted RBP	4.86	□□□□□ -1.63
ATP3	YBR039W	ALG14	P38242	237 aa		4.85	□□□□□ -1.63
ATP3	YBR039W	GLT1	Q12680	2145 aa	Known RBP	4.84	□□□□□ -1.63
ATP3	YBR039W	PEP12	P32854	288 aa		4.84	□□□□□ -1.63
ATP3	YBR039W	ACS2	P52910	683 aa	Known RBP	4.84	□□□□□ -1.63
ATP3	YBR039W	HEH2	Q03281	663 aa		4.84	□□□□□ -1.63
ATP3	YBR039W	HAP4	P14064	554 aa		4.83	□□□□□ -1.64
ATP3	YBR039W	PHO87	P25360	923 aa		4.83	□□□□□ -1.64
ATP3	YBR039W	PGM2	P37012	569 aa	Known RBP	4.83	□□□□□ -1.64
ATP3	YBR039W	NHA1	Q99271	985 aa		4.83	□□□□□ -1.64
ATP3	YBR039W	NCL1	P38205	684 aa	Known RBP	4.82	□□□□□ -1.64
ATP3	YBR039W	TPS3	P38426	1054 aa	Known RBP	4.81	□□□□□ -1.64
ATP3	YBR039W	KAP122	P32767	1081 aa		4.8	□□□□□ -1.64
ATP3	YBR039W	MAC1	P35192	417 aa		4.8	□□□□□ -1.64
ATP3	YBR039W	PRK1	P40494	810 aa		4.8	□□□□□ -1.64
ATP3	YBR039W	CUS1	Q02554	436 aa	Predicted RBP	4.8	□□□□□ -1.64
ATP3	YBR039W	YPL034W	Q03083	165 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms