RNA–Protein interactions for RNA: YAL020C

ATS1, Protein required for modification of wobble nucleosides in tRNA, yeast

Gene ATS1, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATS1	YAL020C	SSK22	P25390	1331 aa	Predicted RBP	19.14	■□□□□ 0.65
ATS1	YAL020C	YBR287W	P38355	427 aa		19.11	■□□□□ 0.65
ATS1	YAL020C	MSM1	P22438	575 aa		19.1	■□□□□ 0.65
ATS1	YAL020C	DPL1	Q05567	589 aa		19.09	■□□□□ 0.65
ATS1	YAL020C	FAS2	P19097	1887 aa	Known RBP	19.08	■□□□□ 0.65
ATS1	YAL020C	VHR2	P40041	505 aa		19.08	■□□□□ 0.64
ATS1	YAL020C	IOC4	Q04213	475 aa		19.08	■□□□□ 0.64
ATS1	YAL020C	GAP1	P19145	602 aa	Predicted RBP	19.06	■□□□□ 0.64
ATS1	YAL020C	THI22	Q06490	572 aa		19.06	■□□□□ 0.64
ATS1	YAL020C	FET4	P40988	552 aa		19.05	■□□□□ 0.64
ATS1	YAL020C	PKH1	Q03407	766 aa		19.05	■□□□□ 0.64
ATS1	YAL020C	YLR271W	Q06152	274 aa		19.05	■□□□□ 0.64
ATS1	YAL020C	YOL057W	Q08225	711 aa		19.04	■□□□□ 0.64
ATS1	YAL020C	GYP7	P48365	746 aa		19.03	■□□□□ 0.64
ATS1	YAL020C	GLC3	P32775	704 aa		19.02	■□□□□ 0.64
ATS1	YAL020C	DUS1	P53759	423 aa	Known RBP	19.01	■□□□□ 0.63
ATS1	YAL020C	RTT109	Q07794	436 aa		19.01	■□□□□ 0.63
ATS1	YAL020C	TIM50	Q02776	476 aa		19	■□□□□ 0.63
ATS1	YAL020C	AIM7	Q12156	149 aa		19	■□□□□ 0.63
ATS1	YAL020C	ETP1	P38748	585 aa	Known RBP	18.99	■□□□□ 0.63
ATS1	YAL020C	MPP10	P47083	593 aa	Known RBP	18.99	■□□□□ 0.63
ATS1	YAL020C	FCP1	Q03254	732 aa		18.99	■□□□□ 0.63
ATS1	YAL020C	DNM1	P54861	757 aa		18.98	■□□□□ 0.63
ATS1	YAL020C	SET4	P42948	560 aa		18.96	■□□□□ 0.63
ATS1	YAL020C	YIL089W	P40500	205 aa		18.95	■□□□□ 0.62
ATS1	YAL020C	TRM44	Q02648	567 aa	Known RBP	18.95	■□□□□ 0.62
ATS1	YAL020C	SWI1	P09547	1314 aa		18.94	■□□□□ 0.62
ATS1	YAL020C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	18.93	■□□□□ 0.62	RIP-Chip
ATS1	YAL020C	TIF4632	P39936	914 aa	Known RBP	18.93	■□□□□ 0.62
ATS1	YAL020C	CST6	P40535	587 aa		18.92	■□□□□ 0.62
ATS1	YAL020C	FIG2	P25653	1609 aa		18.92	■□□□□ 0.62
ATS1	YAL020C	KRE2	P27809	442 aa		18.91	■□□□□ 0.62
ATS1	YAL020C	YGR117C	P53270	476 aa		18.91	■□□□□ 0.62
ATS1	YAL020C	DPH6	Q12429	685 aa		18.91	■□□□□ 0.62
ATS1	YAL020C	HKR1	P41809	1802 aa		18.9	■□□□□ 0.62
ATS1	YAL020C	PEA2	P40091	420 aa		18.9	■□□□□ 0.62
ATS1	YAL020C	EMP47	P43555	445 aa		18.9	■□□□□ 0.62
ATS1	YAL020C	VPS4	P52917	437 aa		18.9	■□□□□ 0.62
ATS1	YAL020C	GAS5	Q08193	484 aa		18.9	■□□□□ 0.62
ATS1	YAL020C	TRP5	P00931	707 aa	Known RBP	18.89	■□□□□ 0.61
ATS1	YAL020C	TPD3	P31383	635 aa		18.88	■□□□□ 0.61
ATS1	YAL020C	AFG2	P32794	780 aa		18.88	■□□□□ 0.61
ATS1	YAL020C	ICP55	P40051	511 aa		18.88	■□□□□ 0.61
ATS1	YAL020C	SRT1	Q03175	343 aa		18.88	■□□□□ 0.61
ATS1	YAL020C	YDR306C	Q06640	478 aa		18.88	■□□□□ 0.61
ATS1	YAL020C	POM152	P39685	1337 aa		18.87	■□□□□ 0.61
ATS1	YAL020C	YJR008W	P47085	338 aa		18.87	■□□□□ 0.61
ATS1	YAL020C	HEF3	P53978	1044 aa	Known RBP	18.87	■□□□□ 0.61
ATS1	YAL020C	YDL144C	Q07589	356 aa		18.87	■□□□□ 0.61
ATS1	YAL020C	RRG1	Q12167	365 aa	Predicted RBP	18.87	■□□□□ 0.61
ATS1	YAL020C	NUP133	P36161	1157 aa		18.86	■□□□□ 0.61
ATS1	YAL020C	HPR1	P17629	752 aa	Known RBP	18.85	■□□□□ 0.61
ATS1	YAL020C	CRF1	Q04930	467 aa		18.85	■□□□□ 0.61
ATS1	YAL020C	STV1	P37296	890 aa		18.84	■□□□□ 0.61
ATS1	YAL020C	CWC15	Q03772	175 aa	Known RBP	18.84	■□□□□ 0.61
ATS1	YAL020C	UBX2	Q04228	584 aa		18.84	■□□□□ 0.61
ATS1	YAL020C	MRP7	P12687	371 aa		18.82	■□□□□ 0.6
ATS1	YAL020C	ITC1	P53125	1264 aa		18.82	■□□□□ 0.6
ATS1	YAL020C	RPT4	P53549	437 aa	Known RBP	18.82	■□□□□ 0.6
ATS1	YAL020C	SPL2	P38839	148 aa		18.81	■□□□□ 0.6
ATS1	YAL020C	TYW1	Q08960	810 aa	Known RBP	18.8	■□□□□ 0.6
ATS1	YAL020C	SET1	P38827	1080 aa	Known RBP	18.79	■□□□□ 0.6
ATS1	YAL020C	GSM1	P42950	618 aa		18.79	■□□□□ 0.6
ATS1	YAL020C	MGM1	P32266	881 aa		18.78	■□□□□ 0.6
ATS1	YAL020C	NGR1	P32831	672 aa	Known RBP	18.78	■□□□□ 0.6
ATS1	YAL020C	THI3	Q07471	609 aa		18.77	■□□□□ 0.6
ATS1	YAL020C	PSH1	Q12161	406 aa		18.77	■□□□□ 0.6
ATS1	YAL020C	SAC3	P46674	1301 aa		18.75	■□□□□ 0.59
ATS1	YAL020C	SEN54	Q02825	467 aa	Predicted RBP	18.75	■□□□□ 0.59
ATS1	YAL020C	PRP42	Q03776	544 aa	Known RBP	18.73	■□□□□ 0.59
ATS1	YAL020C	YGR122W	P53272	402 aa		18.72	■□□□□ 0.59
ATS1	YAL020C	TIF6	Q12522	245 aa	Known RBP	18.72	■□□□□ 0.59
ATS1	YAL020C	FLO11	P08640	1367 aa		18.7	■□□□□ 0.58
ATS1	YAL020C	SRF1	Q12516	437 aa		18.69	■□□□□ 0.58
ATS1	YAL020C	CBP1	P07252	654 aa		18.68	■□□□□ 0.58
ATS1	YAL020C	PNT1	P38969	423 aa		18.68	■□□□□ 0.58
ATS1	YAL020C	MTC5	Q03897	1148 aa		18.68	■□□□□ 0.58
ATS1	YAL020C	TOS4	Q06266	489 aa		18.68	■□□□□ 0.58
ATS1	YAL020C	HVG1	P0CE11	249 aa		18.67	■□□□□ 0.58
ATS1	YAL020C	SRC1	Q03707	834 aa		18.67	■□□□□ 0.58
ATS1	YAL020C	SWC3	P31376	625 aa		18.66	■□□□□ 0.58
ATS1	YAL020C	BSD2	P38356	321 aa		18.66	■□□□□ 0.58
ATS1	YAL020C	IRC4	Q03036	179 aa		18.66	■□□□□ 0.58
ATS1	YAL020C	LCB1	P25045	558 aa	Known RBP	18.65	■□□□□ 0.58
ATS1	YAL020C	CSR2	Q12734	1121 aa		18.65	■□□□□ 0.58
ATS1	YAL020C	SUP35	P05453	685 aa	Known RBP	18.64	■□□□□ 0.57
ATS1	YAL020C	NOP8	Q08287	484 aa	Predicted RBP	18.64	■□□□□ 0.57
ATS1	YAL020C	UBP12	P39538	1254 aa		18.63	■□□□□ 0.57
ATS1	YAL020C	RPS7A	P26786	190 aa	Known RBP	18.62	■□□□□ 0.57
ATS1	YAL020C	RAD24	P32641	659 aa		18.62	■□□□□ 0.57
ATS1	YAL020C	HXT10	P43581	546 aa		18.62	■□□□□ 0.57
ATS1	YAL020C	RRT6	P53117	311 aa	Predicted RBP	18.62	■□□□□ 0.57
ATS1	YAL020C	ARG82	P07250	355 aa		18.61	■□□□□ 0.57
ATS1	YAL020C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	18.61	■□□□□ 0.57	not detected
ATS1	YAL020C	SNU66	Q12420	587 aa	Predicted RBP	18.61	■□□□□ 0.57
ATS1	YAL020C	UTP7	P40055	554 aa	Known RBP	18.6	■□□□□ 0.57
ATS1	YAL020C	SUI2	P20459	304 aa	Known RBP	18.59	■□□□□ 0.57
ATS1	YAL020C	SDH2	P21801	266 aa		18.59	■□□□□ 0.57
ATS1	YAL020C	MTC3	P53077	123 aa		18.59	■□□□□ 0.57
ATS1	YAL020C	NUG1	P40010	520 aa	Known RBP	18.57	■□□□□ 0.56

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms