RNA–Protein interactions for RNA: HRA1

HRA1, Non-protein-coding RNA, yeastyeast

Gene HRA1, Length 564 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRA1HRA1 HAT1Q12341 374 aa10.24□□□□□ -0.77
HRA1HRA1 PMD1P32634 1753 aa10.24□□□□□ -0.77
HRA1HRA1 ARG8P18544 423 aa10.23□□□□□ -0.77
HRA1HRA1 EMP47P43555 445 aa10.23□□□□□ -0.77
HRA1HRA1 NSE3Q05541 303 aa10.23□□□□□ -0.77
HRA1HRA1 FAS2P19097 1887 aaKnown RBP10.23□□□□□ -0.77
HRA1HRA1 DCD1P06773 312 aa10.22□□□□□ -0.77
HRA1HRA1 YGR117CP53270 476 aa10.22□□□□□ -0.77
HRA1HRA1 BSD2P38356 321 aa10.21□□□□□ -0.77
HRA1HRA1 TIF4632P39936 914 aaKnown RBP10.21□□□□□ -0.77
HRA1HRA1 PRY3P47033 881 aa10.21□□□□□ -0.77
HRA1HRA1 APL2P36000 726 aaPredicted RBP10.2□□□□□ -0.78
HRA1HRA1 SSK22P25390 1331 aaPredicted RBP10.19□□□□□ -0.78
HRA1HRA1 TRK1P12685 1235 aa10.18□□□□□ -0.78
HRA1HRA1 HPR1P17629 752 aaKnown RBP10.18□□□□□ -0.78
HRA1HRA1 VPS4P52917 437 aa10.18□□□□□ -0.78
HRA1HRA1 NCS6P53088 359 aa10.18□□□□□ -0.78
HRA1HRA1 CRF1Q04930 467 aa10.18□□□□□ -0.78
HRA1HRA1 YPR204WQ08995 1032 aa10.18□□□□□ -0.78
HRA1HRA1 HVG1P0CE11 249 aa10.17□□□□□ -0.78
HRA1HRA1 VPS64Q03944 604 aa10.16□□□□□ -0.78
HRA1HRA1 PIB1Q06651 286 aa10.16□□□□□ -0.78
HRA1HRA1 FIG2P25653 1609 aa10.15□□□□□ -0.78
HRA1HRA1 AFG2P32794 780 aa10.15□□□□□ -0.78
HRA1HRA1 YNL050CP53952 270 aa10.15□□□□□ -0.78
HRA1HRA1 RRG1Q12167 365 aaPredicted RBP10.15□□□□□ -0.78
HRA1HRA1 CSR2Q12734 1121 aa10.14□□□□□ -0.79
HRA1HRA1 RRT6P53117 311 aaPredicted RBP10.13□□□□□ -0.79
HRA1HRA1 CST9Q06032 482 aa10.13□□□□□ -0.79
HRA1HRA1 NSR1P27476 414 aaKnown RBP RIP-Chip data10.12□□□□□ -0.79not detected
HRA1HRA1 STV1P37296 890 aa10.12□□□□□ -0.79
HRA1HRA1 RSC30P38781 883 aa10.12□□□□□ -0.79
HRA1HRA1 SET4P42948 560 aa10.12□□□□□ -0.79
HRA1HRA1 SEN54Q02825 467 aaPredicted RBP10.12□□□□□ -0.79
HRA1HRA1 PCS60P38137 543 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79not detected
HRA1HRA1 PKH1Q03407 766 aa10.11□□□□□ -0.79
HRA1HRA1 GAS5Q08193 484 aa10.11□□□□□ -0.79
HRA1HRA1 YKR023WP36119 530 aaKnown RBP10.1□□□□□ -0.79
HRA1HRA1 PNT1P38969 423 aa10.1□□□□□ -0.79
HRA1HRA1 ZDS2P54786 942 aa10.1□□□□□ -0.79
HRA1HRA1 UBX2Q04228 584 aa10.1□□□□□ -0.79
HRA1HRA1 KRE2P27809 442 aa10.09□□□□□ -0.79
HRA1HRA1 PAM1P37304 830 aaKnown RBP10.09□□□□□ -0.79
HRA1HRA1 ZDS1P50111 915 aaKnown RBP10.09□□□□□ -0.79
HRA1HRA1 DPH6Q12429 685 aa10.09□□□□□ -0.79
HRA1HRA1 LYS2P07702 1392 aa10.08□□□□□ -0.8
HRA1HRA1 TRP5P00931 707 aaKnown RBP10.07□□□□□ -0.8
HRA1HRA1 CBP1P07252 654 aa10.07□□□□□ -0.8
HRA1HRA1 MOT2P34909 587 aaKnown RBP10.07□□□□□ -0.8
HRA1HRA1 APE3P37302 537 aaKnown RBP10.07□□□□□ -0.8
HRA1HRA1 RRP46P53256 223 aaPredicted RBP10.07□□□□□ -0.8
HRA1HRA1 YLR271WQ06152 274 aa10.07□□□□□ -0.8
HRA1HRA1 POL5P39985 1022 aaKnown RBP10.06□□□□□ -0.8
HRA1HRA1 GSM1P42950 618 aa10.06□□□□□ -0.8
HRA1HRA1 ICP55P40051 511 aa10.05□□□□□ -0.8
HRA1HRA1 MAM1P40065 302 aa10.05□□□□□ -0.8
HRA1HRA1 BMS1Q08965 1183 aaKnown RBP10.05□□□□□ -0.8
HRA1HRA1 HKR1P41809 1802 aa10.05□□□□□ -0.8
HRA1HRA1 COQ4O13525 335 aa10.04□□□□□ -0.8
HRA1HRA1 RPT4P53549 437 aaKnown RBP10.03□□□□□ -0.8
HRA1HRA1 PRP42Q03776 544 aaKnown RBP10.03□□□□□ -0.8
HRA1HRA1 RBA50Q04418 439 aa10.03□□□□□ -0.8
HRA1HRA1 YBR287WP38355 427 aa10.02□□□□□ -0.81
HRA1HRA1 FCP1Q03254 732 aa10.02□□□□□ -0.81
HRA1HRA1 RTR1P40084 226 aaPredicted RBP10.01□□□□□ -0.81
HRA1HRA1 DNM1P54861 757 aa10.01□□□□□ -0.81
HRA1HRA1 YOL057WQ08225 711 aa10.01□□□□□ -0.81
HRA1HRA1 PRD1P25375 712 aa9.99□□□□□ -0.81
HRA1HRA1 SPL2P38839 148 aa9.99□□□□□ -0.81
HRA1HRA1 NOP2P40991 618 aaKnown RBP9.99□□□□□ -0.81
HRA1HRA1 MGM1P32266 881 aa9.98□□□□□ -0.81
HRA1HRA1 MAL31P38156 614 aa9.98□□□□□ -0.81
HRA1HRA1 JIP4Q03361 876 aa9.98□□□□□ -0.81
HRA1HRA1 GAL2P13181 574 aa9.97□□□□□ -0.81
HRA1HRA1 NGR1P32831 672 aaKnown RBP9.97□□□□□ -0.81
HRA1HRA1 NIT1P40447 199 aa9.97□□□□□ -0.81
HRA1HRA1 SGD1Q06132 899 aa9.97□□□□□ -0.81
HRA1HRA1 FLO11P08640 1367 aa9.97□□□□□ -0.81
HRA1HRA1 CST6P40535 587 aa9.96□□□□□ -0.82
HRA1HRA1 THI3Q07471 609 aa9.96□□□□□ -0.82
HRA1HRA1 GYP7P48365 746 aa9.95□□□□□ -0.82
HRA1HRA1 SWI1P09547 1314 aa9.95□□□□□ -0.82
HRA1HRA1 RPS7AP26786 190 aaKnown RBP9.94□□□□□ -0.82
HRA1HRA1 ASH1P34233 588 aa9.94□□□□□ -0.82
HRA1HRA1 UTP7P40055 554 aaKnown RBP9.94□□□□□ -0.82
HRA1HRA1 MTC3P53077 123 aa9.94□□□□□ -0.82
HRA1HRA1 ACK1Q07622 623 aaPredicted RBP9.94□□□□□ -0.82
HRA1HRA1 ARG82P07250 355 aa9.93□□□□□ -0.82
HRA1HRA1 ITC1P53125 1264 aa9.93□□□□□ -0.82
HRA1HRA1 SRC1Q03707 834 aa9.93□□□□□ -0.82
HRA1HRA1 YLR225CQ05948 407 aaKnown RBP9.93□□□□□ -0.82
HRA1HRA1 TOS4Q06266 489 aa9.93□□□□□ -0.82
HRA1HRA1 NUP133P36161 1157 aa9.92□□□□□ -0.82
HRA1HRA1 SPR3P41901 512 aa9.92□□□□□ -0.82
HRA1HRA1 YJR008WP47085 338 aa9.92□□□□□ -0.82
HRA1HRA1 IRC4Q03036 179 aa9.92□□□□□ -0.82
HRA1HRA1 GSC2P40989 1895 aa9.91□□□□□ -0.82
HRA1HRA1 SAC3P46674 1301 aa9.91□□□□□ -0.82
HRA1HRA1 JJJ2P46997 583 aa9.91□□□□□ -0.82
HRA1HRA1 PSF3Q12146 194 aa9.91□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms