RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 NBPF1Q3BBV0 1214 aa16.27■□□□□ 0.2
CASC19-272ENST00000641991 PIK3C2GO75747 1445 aa16.26■□□□□ 0.19
CASC19-272ENST00000641991 TNRQ92752 1358 aa16.26■□□□□ 0.19
CASC19-272ENST00000641991 KIAA1210Q9ULL0 1709 aa16.26■□□□□ 0.19
CASC19-272ENST00000641991 ZFYVE9O95405 1425 aa16.25■□□□□ 0.19
CASC19-272ENST00000641991 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
CASC19-272ENST00000641991 FER1L4A9Z1Z3 1794 aa16.25■□□□□ 0.19
CASC19-272ENST00000641991 C3P01024 1663 aa16.21■□□□□ 0.19
CASC19-272ENST00000641991 WASHC2AQ641Q2 1341 aa16.21■□□□□ 0.19
CASC19-272ENST00000641991 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
CASC19-272ENST00000641991 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
CASC19-272ENST00000641991 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
CASC19-272ENST00000641991 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
CASC19-272ENST00000641991 IQGAP1P46940 1657 aa16.2■□□□□ 0.18
CASC19-272ENST00000641991 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
CASC19-272ENST00000641991 SCAF11Q99590 1463 aaKnown RBP16.19■□□□□ 0.18
CASC19-272ENST00000641991 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
CASC19-272ENST00000641991 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
CASC19-272ENST00000641991 CFAP70Q5T0N1 1121 aa16.19■□□□□ 0.18
CASC19-272ENST00000641991 MYO5BQ9ULV0 1848 aa16.19■□□□□ 0.18
CASC19-272ENST00000641991 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
CASC19-272ENST00000641991 CEBPAP49715 358 aaPredicted RBP16.18■□□□□ 0.18
CASC19-272ENST00000641991 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
CASC19-272ENST00000641991 ADGRB1O14514 1584 aa16.18■□□□□ 0.18
CASC19-272ENST00000641991 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
CASC19-272ENST00000641991 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
CASC19-272ENST00000641991 C14orf93Q9H972 538 aaKnown RBP16.17■□□□□ 0.18
CASC19-272ENST00000641991 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
CASC19-272ENST00000641991 RIMS2Q9UQ26 1411 aa16.16■□□□□ 0.18
CASC19-272ENST00000641991 RIMS1Q86UR5 1692 aaKnown RBP16.15■□□□□ 0.18
CASC19-272ENST00000641991 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
CASC19-272ENST00000641991 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
CASC19-272ENST00000641991 TESK2Q96S53 571 aa16.14■□□□□ 0.17
CASC19-272ENST00000641991 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
CASC19-272ENST00000641991 ASXL1Q8IXJ9 1541 aa16.13■□□□□ 0.17
CASC19-272ENST00000641991 EIF3AQ14152 1382 aaKnown RBP16.12■□□□□ 0.17
CASC19-272ENST00000641991 TMEM2Q9UHN6 1383 aa16.12■□□□□ 0.17
CASC19-272ENST00000641991 MIER1Q8N108 512 aa16.12■□□□□ 0.17
CASC19-272ENST00000641991 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
CASC19-272ENST00000641991 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
CASC19-272ENST00000641991 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
CASC19-272ENST00000641991 ARHGAP23Q9P227 1491 aa16.09■□□□□ 0.17
CASC19-272ENST00000641991 ALKQ9UM73 1620 aa16.09■□□□□ 0.17
CASC19-272ENST00000641991 SLIT1O75093 1534 aa16.08■□□□□ 0.16
CASC19-272ENST00000641991 PTPRMP28827 1452 aa16.07■□□□□ 0.16
CASC19-272ENST00000641991 NRXN3Q9Y4C0 1643 aa16.06■□□□□ 0.16
CASC19-272ENST00000641991 SBNO2Q9Y2G9 1366 aa16.06■□□□□ 0.16
CASC19-272ENST00000641991 TMEM132EQ6IEE7 984 aa16.06■□□□□ 0.16
CASC19-272ENST00000641991 CEP170BQ9Y4F5 1589 aaPredicted RBP16.06■□□□□ 0.16
CASC19-272ENST00000641991 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
CASC19-272ENST00000641991 SETD1AO15047 1707 aaKnown RBP16.04■□□□□ 0.16
CASC19-272ENST00000641991 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
CASC19-272ENST00000641991 TMF1P82094 1093 aa16.03■□□□□ 0.16
CASC19-272ENST00000641991 ZNF142P52746 1687 aaPredicted RBP16.03■□□□□ 0.16
CASC19-272ENST00000641991 YTHDC2Q9H6S0 1430 aaKnown RBP16.03■□□□□ 0.16
CASC19-272ENST00000641991 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
CASC19-272ENST00000641991 CENPJQ9HC77 1338 aaPredicted RBP16.02■□□□□ 0.15
CASC19-272ENST00000641991 TRAK1Q9UPV9 953 aa16.01■□□□□ 0.15
CASC19-272ENST00000641991 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
CASC19-272ENST00000641991 LTKP29376 864 aa16■□□□□ 0.15
CASC19-272ENST00000641991 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
CASC19-272ENST00000641991 ADAMTS13Q76LX8 1427 aa16■□□□□ 0.15
CASC19-272ENST00000641991 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
CASC19-272ENST00000641991 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
CASC19-272ENST00000641991 POLR3GLQ9BT43 218 aa16■□□□□ 0.15
CASC19-272ENST00000641991 QRICH2Q9H0J4 1663 aa15.99■□□□□ 0.15
CASC19-272ENST00000641991 DLC1Q96QB1 1528 aa15.99■□□□□ 0.15
CASC19-272ENST00000641991 MED14O60244 1454 aa15.98■□□□□ 0.15
CASC19-272ENST00000641991 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
CASC19-272ENST00000641991 TXNDC2Q86VQ3 553 aa15.98■□□□□ 0.15
CASC19-272ENST00000641991 METP08581 1390 aa15.98■□□□□ 0.15
CASC19-272ENST00000641991 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
CASC19-272ENST00000641991 EID1Q9Y6B2 187 aa15.97■□□□□ 0.15
CASC19-272ENST00000641991 ABCC11Q96J66 1382 aa15.96■□□□□ 0.15
CASC19-272ENST00000641991 ANP32CO43423 234 aa15.96■□□□□ 0.15
CASC19-272ENST00000641991 STK26Q9P289 416 aa15.96■□□□□ 0.15
CASC19-272ENST00000641991 TECPR2O15040 1411 aa15.95■□□□□ 0.14
CASC19-272ENST00000641991 TULP4Q9NRJ4 1543 aa15.95■□□□□ 0.14
CASC19-272ENST00000641991 DIP2AQ14689 1571 aa15.94■□□□□ 0.14
CASC19-272ENST00000641991 CPS1P31327 1500 aa15.92■□□□□ 0.14
CASC19-272ENST00000641991 MYOM1P52179 1685 aa15.92■□□□□ 0.14
CASC19-272ENST00000641991 KNDC1Q76NI1 1749 aa15.92■□□□□ 0.14
CASC19-272ENST00000641991 PRAM1Q96QH2 718 aa15.92■□□□□ 0.14
CASC19-272ENST00000641991 FAM135BQ49AJ0 1406 aa15.9■□□□□ 0.14
CASC19-272ENST00000641991 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
CASC19-272ENST00000641991 SIRT1Q96EB6 747 aa15.89■□□□□ 0.13
CASC19-272ENST00000641991 BCANQ96GW7 911 aa15.89■□□□□ 0.13
CASC19-272ENST00000641991 TBX22Q9Y458 520 aa15.89■□□□□ 0.13
CASC19-272ENST00000641991 PLEKHH1Q9ULM0 1364 aa15.89■□□□□ 0.13
CASC19-272ENST00000641991 PUS7Q96PZ0 661 aaKnown RBP15.88■□□□□ 0.13
CASC19-272ENST00000641991 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
CASC19-272ENST00000641991 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
CASC19-272ENST00000641991 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
CASC19-272ENST00000641991 SETD1BQ9UPS6 1966 aaKnown RBP15.88■□□□□ 0.13
CASC19-272ENST00000641991 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
CASC19-272ENST00000641991 PANK3Q9H999 370 aa15.87■□□□□ 0.13
CASC19-272ENST00000641991 POGKQ9P215 609 aa15.87■□□□□ 0.13
CASC19-272ENST00000641991 SAFB2Q14151 953 aaKnown RBP eCLIP15.87■□□□□ 0.13
CASC19-272ENST00000641991 ANKLE2Q86XL3 938 aa15.87■□□□□ 0.13
CASC19-272ENST00000641991 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 372 ms