RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-255ENST00000641733 IRF6O14896 467 aa10.6□□□□□ -0.71
CASC19-255ENST00000641733 MMRN1Q13201 1228 aa10.6□□□□□ -0.71
CASC19-255ENST00000641733 WNT2BQ93097 391 aa10.6□□□□□ -0.71
CASC19-255ENST00000641733 DNAJB2P25686 324 aa10.59□□□□□ -0.71
CASC19-255ENST00000641733 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
CASC19-255ENST00000641733 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
CASC19-255ENST00000641733 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
CASC19-255ENST00000641733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.58□□□□□ -0.72
CASC19-255ENST00000641733 SLC4A3P48751 1232 aa10.58□□□□□ -0.72
CASC19-255ENST00000641733 KCTD12Q96CX2 325 aaKnown RBP10.58□□□□□ -0.72
CASC19-255ENST00000641733 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
CASC19-255ENST00000641733 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
CASC19-255ENST00000641733 RCCD1A6NED2 376 aa10.56□□□□□ -0.72
CASC19-255ENST00000641733 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
CASC19-255ENST00000641733 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
CASC19-255ENST00000641733 THSD4Q6ZMP0 1018 aa10.54□□□□□ -0.72
CASC19-255ENST00000641733 TMEM134Q9H6X4 195 aa10.54□□□□□ -0.72
CASC19-255ENST00000641733 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
CASC19-255ENST00000641733 SLF2Q8IX21 1173 aa10.52□□□□□ -0.72
CASC19-255ENST00000641733 NECTIN2Q92692 538 aa10.52□□□□□ -0.72
CASC19-255ENST00000641733 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.72
CASC19-255ENST00000641733 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.73
CASC19-255ENST00000641733 AK7Q96M32 723 aa10.52□□□□□ -0.73
CASC19-255ENST00000641733 BCAMP50895 628 aa10.5□□□□□ -0.73
CASC19-255ENST00000641733 HCSTQ9UBK5 93 aa10.5□□□□□ -0.73
CASC19-255ENST00000641733 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
CASC19-255ENST00000641733 RNF40O75150 1001 aa10.49□□□□□ -0.73
CASC19-255ENST00000641733 TSR3Q9UJK0 312 aaKnown RBP10.49□□□□□ -0.73
CASC19-255ENST00000641733 HRCP23327 699 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 ARID3AQ99856 593 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 HPS5Q9UPZ3 1129 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 PTPN5P54829 565 aa10.47□□□□□ -0.73
CASC19-255ENST00000641733 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
CASC19-255ENST00000641733 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
CASC19-255ENST00000641733 CCDC9Q9Y3X0 531 aaKnown RBP10.47□□□□□ -0.73
CASC19-255ENST00000641733 CLCN1P35523 988 aa10.46□□□□□ -0.74
CASC19-255ENST00000641733 PPP4CP60510 307 aa10.46□□□□□ -0.74
CASC19-255ENST00000641733 SULF1Q8IWU6 871 aa10.46□□□□□ -0.74
CASC19-255ENST00000641733 AMHR2Q16671 573 aa10.45□□□□□ -0.74
CASC19-255ENST00000641733 TRIM66O15016 1216 aa10.44□□□□□ -0.74
CASC19-255ENST00000641733 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
CASC19-255ENST00000641733 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
CASC19-255ENST00000641733 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
CASC19-255ENST00000641733 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
CASC19-255ENST00000641733 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
CASC19-255ENST00000641733 PRR14Q9BWN1 585 aa10.42□□□□□ -0.74
CASC19-255ENST00000641733 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
CASC19-255ENST00000641733 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 PDE4DQ08499 809 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 ABCC9O60706 1549 aa10.38□□□□□ -0.75
CASC19-255ENST00000641733 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
CASC19-255ENST00000641733 CFHP08603 1231 aa10.36□□□□□ -0.75
CASC19-255ENST00000641733 SLC10A3P09131 477 aa10.36□□□□□ -0.75
CASC19-255ENST00000641733 PARP9Q8IXQ6 854 aa10.36□□□□□ -0.75
CASC19-255ENST00000641733 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
CASC19-255ENST00000641733 GIGYF2Q6Y7W6 1299 aaKnown RBP10.35□□□□□ -0.75
CASC19-255ENST00000641733 CD46P15529 392 aa10.33□□□□□ -0.76
CASC19-255ENST00000641733 SSTR3P32745 418 aaPredicted RBP10.33□□□□□ -0.76
CASC19-255ENST00000641733 APLP1P51693 650 aa10.32□□□□□ -0.76
CASC19-255ENST00000641733 REPIN1Q9BWE0 567 aaKnown RBP10.32□□□□□ -0.76
CASC19-255ENST00000641733 GPBP1L1Q9HC44 474 aaPredicted RBP10.32□□□□□ -0.76
CASC19-255ENST00000641733 APBB1O00213 710 aa10.31□□□□□ -0.76
CASC19-255ENST00000641733 ACTN4O43707 911 aaKnown RBP10.31□□□□□ -0.76
CASC19-255ENST00000641733 GCGRP47871 477 aa10.31□□□□□ -0.76
CASC19-255ENST00000641733 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
CASC19-255ENST00000641733 FLIIQ13045 1269 aa10.29□□□□□ -0.76
CASC19-255ENST00000641733 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
CASC19-255ENST00000641733 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
CASC19-255ENST00000641733 USP46P62068 366 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 KDM4AO75164 1064 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
CASC19-255ENST00000641733 NUTM1Q86Y26 1132 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 BEGAINQ9BUH8 593 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 IL21Q9HBE4 155 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 MS4A1P11836 297 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 FUT2Q10981 343 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 MTRQ99707 1265 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 KCNC4Q03721 635 aa10.24□□□□□ -0.77
CASC19-255ENST00000641733 C1orf115Q9H7X2 142 aa10.24□□□□□ -0.77
CASC19-255ENST00000641733 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 NR1I2O75469 434 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 COPS2P61201 443 aa10.22□□□□□ -0.77
CASC19-255ENST00000641733 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.78
CASC19-255ENST00000641733 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.78
CASC19-255ENST00000641733 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
CASC19-255ENST00000641733 PUS10Q3MIT2 529 aaKnown RBP10.19□□□□□ -0.78
CASC19-255ENST00000641733 MORN1Q5T089 497 aa10.19□□□□□ -0.78
CASC19-255ENST00000641733 HOXA2O43364 376 aa10.18□□□□□ -0.78
CASC19-255ENST00000641733 ZPR1O75312 459 aa10.18□□□□□ -0.78
CASC19-255ENST00000641733 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
CASC19-255ENST00000641733 Q3C1V9 767 aa10.16□□□□□ -0.78
CASC19-255ENST00000641733 SCUBE3Q8IX30 993 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms