RNA–Protein interactions for RNA: ENST00000641285.1

PNPO-209, Transcript of pyridoxamine 5'-phosphate oxidase, human

Gene PNPO, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPO-209	ENST00000641285	TOM1	O60784	492 aa		14.04	□□□□□ -0.16
PNPO-209	ENST00000641285	RIMS2	Q9UQ26	1411 aa		14.04	□□□□□ -0.16
PNPO-209	ENST00000641285	RBM33	Q96EV2	1170 aa	Known RBP	14.03	□□□□□ -0.16
PNPO-209	ENST00000641285	LRRC7	Q96NW7	1537 aa		14.03	□□□□□ -0.16
PNPO-209	ENST00000641285	TMEM131L	A2VDJ0	1609 aa		14.03	□□□□□ -0.16
PNPO-209	ENST00000641285	HDGF	P51858	240 aa	Known RBP	14.02	□□□□□ -0.17
PNPO-209	ENST00000641285	HFM1	A2PYH4	1435 aa		14.01	□□□□□ -0.17
PNPO-209	ENST00000641285	ZFYVE9	O95405	1425 aa		14.01	□□□□□ -0.17
PNPO-209	ENST00000641285	ZNF326	Q5BKZ1	582 aa	Known RBP	14.01	□□□□□ -0.17
PNPO-209	ENST00000641285	KCNA6	P17658	529 aa		13.99	□□□□□ -0.17
PNPO-209	ENST00000641285	PROSER2	Q86WR7	435 aa	Predicted RBP	13.99	□□□□□ -0.17
PNPO-209	ENST00000641285	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
PNPO-209	ENST00000641285	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.99	□□□□□ -0.17
PNPO-209	ENST00000641285	SPHKAP	Q2M3C7	1700 aa		13.98	□□□□□ -0.17
PNPO-209	ENST00000641285	PLEKHG1	Q9ULL1	1385 aa		13.98	□□□□□ -0.17
PNPO-209	ENST00000641285	HSPA1L	P34931	641 aa		13.98	□□□□□ -0.17
PNPO-209	ENST00000641285	FOXD1	Q16676	465 aa		13.97	□□□□□ -0.17
PNPO-209	ENST00000641285	TMEM94	Q12767	1356 aa		13.96	□□□□□ -0.17
PNPO-209	ENST00000641285	DISP3	Q9P2K9	1392 aa		13.96	□□□□□ -0.17
PNPO-209	ENST00000641285	ALK	Q9UM73	1620 aa		13.95	□□□□□ -0.18
PNPO-209	ENST00000641285	CLTCL1	P53675	1640 aa		13.94	□□□□□ -0.18
PNPO-209	ENST00000641285	XIRP1	Q702N8	1843 aa	Known RBP	13.93	□□□□□ -0.18
PNPO-209	ENST00000641285	TBX22	Q9Y458	520 aa		13.93	□□□□□ -0.18
PNPO-209	ENST00000641285	ADAMTS13	Q76LX8	1427 aa		13.92	□□□□□ -0.18
PNPO-209	ENST00000641285	TRPM2	O94759	1503 aa		13.92	□□□□□ -0.18
PNPO-209	ENST00000641285	C14orf37	Q86TY3	774 aa		13.92	□□□□□ -0.18
PNPO-209	ENST00000641285	MPHOSPH9	Q99550	1183 aa		13.9	□□□□□ -0.18
PNPO-209	ENST00000641285	NWD1	Q149M9	1564 aa		13.9	□□□□□ -0.18
PNPO-209	ENST00000641285	NKTR	P30414	1462 aa	Known RBP	13.89	□□□□□ -0.19
PNPO-209	ENST00000641285	AMOTL2	Q9Y2J4	779 aa		13.89	□□□□□ -0.19
PNPO-209	ENST00000641285	CHD2	O14647	1828 aa	Known RBP	13.88	□□□□□ -0.19
PNPO-209	ENST00000641285	KIF1B	O60333	1816 aa		13.88	□□□□□ -0.19
PNPO-209	ENST00000641285	MSH6	P52701	1360 aa		13.88	□□□□□ -0.19
PNPO-209	ENST00000641285	SETD5	Q9C0A6	1442 aa		13.88	□□□□□ -0.19
PNPO-209	ENST00000641285	NEXMIF	Q5QGS0	1516 aa		13.86	□□□□□ -0.19
PNPO-209	ENST00000641285	RGL3	Q3MIN7	710 aa		13.86	□□□□□ -0.19
PNPO-209	ENST00000641285	PTPRU	Q92729	1446 aa		13.86	□□□□□ -0.19
PNPO-209	ENST00000641285	DIP2A	Q14689	1571 aa		13.86	□□□□□ -0.19
PNPO-209	ENST00000641285	MET	P08581	1390 aa		13.85	□□□□□ -0.19
PNPO-209	ENST00000641285	ILDR2	Q71H61	639 aa		13.85	□□□□□ -0.19
PNPO-209	ENST00000641285	RAB3GAP2	Q9H2M9	1393 aa		13.84	□□□□□ -0.19
PNPO-209	ENST00000641285	NRXN3	Q9Y4C0	1643 aa		13.84	□□□□□ -0.19
PNPO-209	ENST00000641285	VGF	O15240	615 aa	Predicted RBP	13.84	□□□□□ -0.19
PNPO-209	ENST00000641285	PIK3R4	Q99570	1358 aa		13.83	□□□□□ -0.19
PNPO-209	ENST00000641285	SETBP1	Q9Y6X0	1596 aa		13.83	□□□□□ -0.19
PNPO-209	ENST00000641285	CCDC144A	A2RUR9	1427 aa		13.83	□□□□□ -0.2
PNPO-209	ENST00000641285	SLAIN2	Q9P270	581 aa		13.83	□□□□□ -0.2
PNPO-209	ENST00000641285	FAM135B	Q49AJ0	1406 aa		13.81	□□□□□ -0.2
PNPO-209	ENST00000641285	ATF3	P18847	181 aa		13.81	□□□□□ -0.2
PNPO-209	ENST00000641285	RPGRIP1L	Q68CZ1	1315 aa		13.81	□□□□□ -0.2
PNPO-209	ENST00000641285	ROBO1	Q9Y6N7	1651 aa		13.81	□□□□□ -0.2
PNPO-209	ENST00000641285	C19orf44	Q9H6X5	657 aa		13.8	□□□□□ -0.2
PNPO-209	ENST00000641285	MED1	Q15648	1581 aa	Predicted RBP	13.79	□□□□□ -0.2
PNPO-209	ENST00000641285	CADPS2	Q86UW7	1296 aa		13.78	□□□□□ -0.2
PNPO-209	ENST00000641285	PHF23	Q9BUL5	403 aa	Predicted RBP	13.78	□□□□□ -0.2
PNPO-209	ENST00000641285	ADGRF5	Q8IZF2	1346 aa		13.78	□□□□□ -0.2
PNPO-209	ENST00000641285	NCOA3	Q9Y6Q9	1424 aa		13.78	□□□□□ -0.2
PNPO-209	ENST00000641285	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.78	□□□□□ -0.2
PNPO-209	ENST00000641285	PPL	O60437	1756 aa		13.77	□□□□□ -0.21
PNPO-209	ENST00000641285	XRN1	Q8IZH2	1706 aa	Known RBP	13.77	□□□□□ -0.21
PNPO-209	ENST00000641285	SPATA31E1	Q6ZUB1	1445 aa		13.76	□□□□□ -0.21
PNPO-209	ENST00000641285	ACIN1	Q9UKV3	1341 aa	Known RBP	13.76	□□□□□ -0.21
PNPO-209	ENST00000641285	STK26	Q9P289	416 aa		13.75	□□□□□ -0.21
PNPO-209	ENST00000641285	ROBO2	Q9HCK4	1378 aa		13.73	□□□□□ -0.21
PNPO-209	ENST00000641285	TMEM132E	Q6IEE7	984 aa		13.73	□□□□□ -0.21
PNPO-209	ENST00000641285	PHLPP1	O60346	1717 aa		13.73	□□□□□ -0.21
PNPO-209	ENST00000641285	ANKRD30B	Q9BXX2	1392 aa		13.72	□□□□□ -0.21
PNPO-209	ENST00000641285	BRINP3	Q76B58	766 aa		13.72	□□□□□ -0.21
PNPO-209	ENST00000641285	SETD1A	O15047	1707 aa	Known RBP	13.72	□□□□□ -0.21
PNPO-209	ENST00000641285	ADGRL3	Q9HAR2	1447 aa		13.71	□□□□□ -0.22
PNPO-209	ENST00000641285	WAPL	Q7Z5K2	1190 aa		13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	DDX17	Q92841	729 aa	Known RBP	13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	KDM2A	Q9Y2K7	1162 aa		13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	DCC	P43146	1447 aa		13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	MST1R	Q04912	1400 aa		13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	PTCH1	Q13635	1447 aa		13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	NALCN	Q8IZF0	1738 aa		13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	IFT172	Q9UG01	1749 aa		13.69	□□□□□ -0.22
PNPO-209	ENST00000641285	JCAD	Q9P266	1359 aa		13.68	□□□□□ -0.22
PNPO-209	ENST00000641285	PIK3C2G	O75747	1445 aa		13.67	□□□□□ -0.22
PNPO-209	ENST00000641285	SOCS7	O14512	581 aa		13.67	□□□□□ -0.22
PNPO-209	ENST00000641285	HRC	P23327	699 aa		13.67	□□□□□ -0.22
PNPO-209	ENST00000641285	CFAP70	Q5T0N1	1121 aa		13.67	□□□□□ -0.22
PNPO-209	ENST00000641285	ASXL1	Q8IXJ9	1541 aa		13.66	□□□□□ -0.22
PNPO-209	ENST00000641285	COL16A1	Q07092	1604 aa	Predicted RBP	13.66	□□□□□ -0.22
PNPO-209	ENST00000641285	NUTM2F	A1L443	756 aa		13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	NUTM2E	B1AL46	878 aa	Predicted RBP	13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	DCAF11	Q8TEB1	546 aa		13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	ORAI2	Q96SN7	254 aa		13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	C14orf93	Q9H972	538 aa	Known RBP	13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	RGS17	Q9UGC6	210 aa	Predicted RBP	13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	LRPPRC	P42704	1394 aa	Known RBP	13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	PLEKHH1	Q9ULM0	1364 aa		13.65	□□□□□ -0.22
PNPO-209	ENST00000641285	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.64	□□□□□ -0.23
PNPO-209	ENST00000641285	C1orf167	Q5SNV9	1468 aa		13.64	□□□□□ -0.23
PNPO-209	ENST00000641285	MEX3C	Q5U5Q3	659 aa	Known RBP	13.64	□□□□□ -0.23
PNPO-209	ENST00000641285	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PNPO-209	ENST00000641285	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms