RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 BCANQ96GW7 911 aa16.96■□□□□ 0.31
KCNMA1-289ENST00000640807 AEBP2Q6ZN18 517 aaPredicted RBP16.95■□□□□ 0.3
KCNMA1-289ENST00000640807 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
KCNMA1-289ENST00000640807 TMEM2Q9UHN6 1383 aa16.95■□□□□ 0.3
KCNMA1-289ENST00000640807 NEURL4Q96JN8 1562 aa16.95■□□□□ 0.3
KCNMA1-289ENST00000640807 RIMS2Q9UQ26 1411 aa16.94■□□□□ 0.3
KCNMA1-289ENST00000640807 SENP3Q9H4L4 574 aaPredicted RBP16.94■□□□□ 0.3
KCNMA1-289ENST00000640807 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
KCNMA1-289ENST00000640807 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
KCNMA1-289ENST00000640807 MYO5BQ9ULV0 1848 aa16.93■□□□□ 0.3
KCNMA1-289ENST00000640807 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-289ENST00000640807 HSPA2P54652 639 aa16.91■□□□□ 0.3
KCNMA1-289ENST00000640807 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
KCNMA1-289ENST00000640807 LTKP29376 864 aa16.89■□□□□ 0.29
KCNMA1-289ENST00000640807 ZNF142P52746 1687 aaPredicted RBP16.89■□□□□ 0.29
KCNMA1-289ENST00000640807 NEXMIFQ5QGS0 1516 aa16.88■□□□□ 0.29
KCNMA1-289ENST00000640807 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
KCNMA1-289ENST00000640807 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
KCNMA1-289ENST00000640807 MYOM2P54296 1465 aa16.86■□□□□ 0.29
KCNMA1-289ENST00000640807 SLIT1O75093 1534 aa16.86■□□□□ 0.29
KCNMA1-289ENST00000640807 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
KCNMA1-289ENST00000640807 PPLO60437 1756 aa16.85■□□□□ 0.29
KCNMA1-289ENST00000640807 SCAF11Q99590 1463 aaKnown RBP16.85■□□□□ 0.29
KCNMA1-289ENST00000640807 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
KCNMA1-289ENST00000640807 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
KCNMA1-289ENST00000640807 NCKAP5LQ9HCH0 1330 aa16.84■□□□□ 0.29
KCNMA1-289ENST00000640807 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
KCNMA1-289ENST00000640807 PLEKHG1Q9ULL1 1385 aa16.82■□□□□ 0.28
KCNMA1-289ENST00000640807 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
KCNMA1-289ENST00000640807 SLC26A8Q96RN1 970 aa16.81■□□□□ 0.28
KCNMA1-289ENST00000640807 C14orf93Q9H972 538 aaKnown RBP16.81■□□□□ 0.28
KCNMA1-289ENST00000640807 ROCK2O75116 1388 aaKnown RBP16.81■□□□□ 0.28
KCNMA1-289ENST00000640807 PIK3C2GO75747 1445 aa16.81■□□□□ 0.28
KCNMA1-289ENST00000640807 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
KCNMA1-289ENST00000640807 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
KCNMA1-289ENST00000640807 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
KCNMA1-289ENST00000640807 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
KCNMA1-289ENST00000640807 NPHP4O75161 1426 aaPredicted RBP16.78■□□□□ 0.28
KCNMA1-289ENST00000640807 TBX22Q9Y458 520 aa16.77■□□□□ 0.28
KCNMA1-289ENST00000640807 RALGAPBQ86X10 1494 aa16.75■□□□□ 0.27
KCNMA1-289ENST00000640807 STK26Q9P289 416 aa16.75■□□□□ 0.27
KCNMA1-289ENST00000640807 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
KCNMA1-289ENST00000640807 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
KCNMA1-289ENST00000640807 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
KCNMA1-289ENST00000640807 ADAMTS13Q76LX8 1427 aa16.73■□□□□ 0.27
KCNMA1-289ENST00000640807 MED14O60244 1454 aa16.73■□□□□ 0.27
KCNMA1-289ENST00000640807 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
KCNMA1-289ENST00000640807 TRAK1Q9UPV9 953 aa16.72■□□□□ 0.27
KCNMA1-289ENST00000640807 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-289ENST00000640807 TRPM1Q7Z4N2 1603 aa16.71■□□□□ 0.27
KCNMA1-289ENST00000640807 METP08581 1390 aa16.71■□□□□ 0.27
KCNMA1-289ENST00000640807 LAMC1P11047 1609 aa16.71■□□□□ 0.27
KCNMA1-289ENST00000640807 KIAA1210Q9ULL0 1709 aa16.7■□□□□ 0.26
KCNMA1-289ENST00000640807 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
KCNMA1-289ENST00000640807 IQGAP1P46940 1657 aa16.7■□□□□ 0.26
KCNMA1-289ENST00000640807 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
KCNMA1-289ENST00000640807 NRXN3Q9Y4C0 1643 aa16.68■□□□□ 0.26
KCNMA1-289ENST00000640807 USP47Q96K76 1375 aa16.68■□□□□ 0.26
KCNMA1-289ENST00000640807 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
KCNMA1-289ENST00000640807 POGKQ9P215 609 aa16.68■□□□□ 0.26
KCNMA1-289ENST00000640807 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-289ENST00000640807 DIP2AQ14689 1571 aa16.67■□□□□ 0.26
KCNMA1-289ENST00000640807 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
KCNMA1-289ENST00000640807 LRPPRCP42704 1394 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-289ENST00000640807 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
KCNMA1-289ENST00000640807 STRCQ7RTU9 1775 aa16.65■□□□□ 0.26
KCNMA1-289ENST00000640807 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
KCNMA1-289ENST00000640807 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
KCNMA1-289ENST00000640807 ABCC11Q96J66 1382 aa16.65■□□□□ 0.26
KCNMA1-289ENST00000640807 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.26
KCNMA1-289ENST00000640807 KCNA6P17658 529 aa16.64■□□□□ 0.26
KCNMA1-289ENST00000640807 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
KCNMA1-289ENST00000640807 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
KCNMA1-289ENST00000640807 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
KCNMA1-289ENST00000640807 ASXL1Q8IXJ9 1541 aa16.63■□□□□ 0.25
KCNMA1-289ENST00000640807 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
KCNMA1-289ENST00000640807 PTPRUQ92729 1446 aa16.61■□□□□ 0.25
KCNMA1-289ENST00000640807 SETD1AO15047 1707 aaKnown RBP16.61■□□□□ 0.25
KCNMA1-289ENST00000640807 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
KCNMA1-289ENST00000640807 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
KCNMA1-289ENST00000640807 SIRT1Q96EB6 747 aa16.6■□□□□ 0.25
KCNMA1-289ENST00000640807 C14orf37Q86TY3 774 aa16.59■□□□□ 0.25
KCNMA1-289ENST00000640807 ZNF335Q9H4Z2 1342 aaPredicted RBP16.58■□□□□ 0.24
KCNMA1-289ENST00000640807 ROBO2Q9HCK4 1378 aa16.58■□□□□ 0.24
KCNMA1-289ENST00000640807 TECPR2O15040 1411 aa16.57■□□□□ 0.24
KCNMA1-289ENST00000640807 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
KCNMA1-289ENST00000640807 FAM135BQ49AJ0 1406 aa16.56■□□□□ 0.24
KCNMA1-289ENST00000640807 TMF1P82094 1093 aa16.55■□□□□ 0.24
KCNMA1-289ENST00000640807 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
KCNMA1-289ENST00000640807 CHD2O14647 1828 aaKnown RBP16.55■□□□□ 0.24
KCNMA1-289ENST00000640807 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
KCNMA1-289ENST00000640807 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
KCNMA1-289ENST00000640807 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
KCNMA1-289ENST00000640807 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
KCNMA1-289ENST00000640807 PLEKHH1Q9ULM0 1364 aa16.54■□□□□ 0.24
KCNMA1-289ENST00000640807 TESK2Q96S53 571 aa16.53■□□□□ 0.24
KCNMA1-289ENST00000640807 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
KCNMA1-289ENST00000640807 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
KCNMA1-289ENST00000640807 CPS1P31327 1500 aa16.52■□□□□ 0.24
KCNMA1-289ENST00000640807 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms