RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 IFT172Q9UG01 1749 aa29.7■■■□□ 2.35
SPIN3-244ENST00000640728 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
SPIN3-244ENST00000640728 POLR1AO95602 1720 aaPredicted RBP29.68■■■□□ 2.34
SPIN3-244ENST00000640728 ANP32CO43423 234 aa29.67■■■□□ 2.34
SPIN3-244ENST00000640728 KIAA1210Q9ULL0 1709 aa29.65■■■□□ 2.34
SPIN3-244ENST00000640728 ESF1Q9H501 851 aaKnown RBP29.64■■■□□ 2.34
SPIN3-244ENST00000640728 CFAP70Q5T0N1 1121 aa29.64■■■□□ 2.34
SPIN3-244ENST00000640728 ZMYM3Q14202 1370 aa29.62■■■□□ 2.33
SPIN3-244ENST00000640728 TESK2Q96S53 571 aa29.62■■■□□ 2.33
SPIN3-244ENST00000640728 PPLO60437 1756 aa29.61■■■□□ 2.33
SPIN3-244ENST00000640728 SPATA31D1Q6ZQQ2 1576 aa29.61■■■□□ 2.33
SPIN3-244ENST00000640728 SCAF11Q99590 1463 aaKnown RBP29.6■■■□□ 2.33
SPIN3-244ENST00000640728 PIK3C2GO75747 1445 aa29.59■■■□□ 2.33
SPIN3-244ENST00000640728 VGFO15240 615 aaPredicted RBP29.58■■■□□ 2.33
SPIN3-244ENST00000640728 NEXMIFQ5QGS0 1516 aa29.57■■■□□ 2.32
SPIN3-244ENST00000640728 C14orf93Q9H972 538 aaKnown RBP29.57■■■□□ 2.32
SPIN3-244ENST00000640728 TMEM131LA2VDJ0 1609 aa29.57■■■□□ 2.32
SPIN3-244ENST00000640728 POLR3GLQ9BT43 218 aa29.55■■■□□ 2.32
SPIN3-244ENST00000640728 IQGAP1P46940 1657 aa29.55■■■□□ 2.32
SPIN3-244ENST00000640728 ZFYVE9O95405 1425 aa29.55■■■□□ 2.32
SPIN3-244ENST00000640728 CCER2I3L3R5 266 aa29.54■■■□□ 2.32
SPIN3-244ENST00000640728 YTHDC1Q96MU7 727 aaKnown RBP29.51■■■□□ 2.31
SPIN3-244ENST00000640728 NUTM2DQ5VT03 806 aaPredicted RBP29.5■■■□□ 2.31
SPIN3-244ENST00000640728 EIF3AQ14152 1382 aaKnown RBP29.49■■■□□ 2.31
SPIN3-244ENST00000640728 SETBP1Q9Y6X0 1596 aa29.49■■■□□ 2.31
SPIN3-244ENST00000640728 TMF1P82094 1093 aa29.48■■■□□ 2.31
SPIN3-244ENST00000640728 DISP3Q9P2K9 1392 aa29.48■■■□□ 2.31
SPIN3-244ENST00000640728 STAG3Q9UJ98 1225 aa29.48■■■□□ 2.31
SPIN3-244ENST00000640728 A2ML1A8K2U0 1454 aa29.44■■■□□ 2.3
SPIN3-244ENST00000640728 ADGRB1O14514 1584 aa29.44■■■□□ 2.3
SPIN3-244ENST00000640728 MYO5BQ9ULV0 1848 aa29.44■■■□□ 2.3
SPIN3-244ENST00000640728 TNRQ92752 1358 aa29.42■■■□□ 2.3
SPIN3-244ENST00000640728 PRKRIP1Q9H875 184 aaPredicted RBP29.42■■■□□ 2.3
SPIN3-244ENST00000640728 CENPBP07199 599 aaPredicted RBP29.41■■■□□ 2.3
SPIN3-244ENST00000640728 TMEM132EQ6IEE7 984 aa29.39■■■□□ 2.3
SPIN3-244ENST00000640728 SLC24A1O60721 1099 aa29.38■■■□□ 2.29
SPIN3-244ENST00000640728 CDCA8Q53HL2 280 aa29.35■■■□□ 2.29
SPIN3-244ENST00000640728 TRAK1Q9UPV9 953 aa29.34■■■□□ 2.29
SPIN3-244ENST00000640728 RIMS2Q9UQ26 1411 aa29.34■■■□□ 2.29
SPIN3-244ENST00000640728 CEBPAP49715 358 aaPredicted RBP29.33■■■□□ 2.29
SPIN3-244ENST00000640728 SBNO2Q9Y2G9 1366 aa29.32■■■□□ 2.28
SPIN3-244ENST00000640728 CENPJQ9HC77 1338 aaPredicted RBP29.31■■■□□ 2.28
SPIN3-244ENST00000640728 MYO3AQ8NEV4 1616 aa29.3■■■□□ 2.28
SPIN3-244ENST00000640728 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.28■■■□□ 2.28
SPIN3-244ENST00000640728 PER1O15534 1290 aaPredicted RBP29.26■■■□□ 2.28
SPIN3-244ENST00000640728 NLRP1Q9C000 1473 aa29.26■■■□□ 2.27
SPIN3-244ENST00000640728 ASXL1Q8IXJ9 1541 aa29.25■■■□□ 2.27
SPIN3-244ENST00000640728 FER1L4A9Z1Z3 1794 aa29.25■■■□□ 2.27
SPIN3-244ENST00000640728 SENP3Q9H4L4 574 aaPredicted RBP29.24■■■□□ 2.27
SPIN3-244ENST00000640728 KDM5AP29375 1690 aaKnown RBP29.24■■■□□ 2.27
SPIN3-244ENST00000640728 HDGFP51858 240 aaKnown RBP29.24■■■□□ 2.27
SPIN3-244ENST00000640728 PANK3Q9H999 370 aa29.24■■■□□ 2.27
SPIN3-244ENST00000640728 C3P01024 1663 aa29.23■■■□□ 2.27
SPIN3-244ENST00000640728 ALKQ9UM73 1620 aa29.23■■■□□ 2.27
SPIN3-244ENST00000640728 TMEM2Q9UHN6 1383 aa29.21■■■□□ 2.27
SPIN3-244ENST00000640728 CCDC184Q52MB2 194 aa29.19■■■□□ 2.26
SPIN3-244ENST00000640728 UBR1Q8IWV7 1749 aa29.18■■■□□ 2.26
SPIN3-244ENST00000640728 YTHDC2Q9H6S0 1430 aaKnown RBP29.18■■■□□ 2.26
SPIN3-244ENST00000640728 STK26Q9P289 416 aa29.17■■■□□ 2.26
SPIN3-244ENST00000640728 KTN1Q86UP2 1357 aaKnown RBP29.17■■■□□ 2.26
SPIN3-244ENST00000640728 CNGB1Q14028 1251 aaPredicted RBP29.15■■■□□ 2.26
SPIN3-244ENST00000640728 PTPRMP28827 1452 aa29.15■■■□□ 2.26
SPIN3-244ENST00000640728 ARHGEF28Q8N1W1 1705 aaKnown RBP29.15■■■□□ 2.26
SPIN3-244ENST00000640728 RALBP1Q15311 655 aa29.15■■■□□ 2.26
SPIN3-244ENST00000640728 PLPPR3Q6T4P5 718 aa29.15■■■□□ 2.26
SPIN3-244ENST00000640728 QRICH2Q9H0J4 1663 aa29.14■■■□□ 2.25
SPIN3-244ENST00000640728 MRS2Q9HD23 443 aa29.12■■■□□ 2.25
SPIN3-244ENST00000640728 PUS7Q96PZ0 661 aaKnown RBP29.1■■■□□ 2.25
SPIN3-244ENST00000640728 NRXN3Q9Y4C0 1643 aa29.09■■■□□ 2.25
SPIN3-244ENST00000640728 LRPPRCP42704 1394 aaKnown RBP29.09■■■□□ 2.25
SPIN3-244ENST00000640728 PARD3Q8TEW0 1356 aa29.08■■■□□ 2.25
SPIN3-244ENST00000640728 MYOM1P52179 1685 aa29.08■■■□□ 2.25
SPIN3-244ENST00000640728 SETD1AO15047 1707 aaKnown RBP29.07■■■□□ 2.24
SPIN3-244ENST00000640728 EVC2Q86UK5 1308 aa29.07■■■□□ 2.24
SPIN3-244ENST00000640728 LTKP29376 864 aa29.07■■■□□ 2.24
SPIN3-244ENST00000640728 PRAM1Q96QH2 718 aa29.07■■■□□ 2.24
SPIN3-244ENST00000640728 KNSTRNQ9Y448 316 aa29.06■■■□□ 2.24
SPIN3-244ENST00000640728 ABCC11Q96J66 1382 aa29.06■■■□□ 2.24
SPIN3-244ENST00000640728 ADAMTSL3P82987 1691 aa29.06■■■□□ 2.24
SPIN3-244ENST00000640728 MYBBP1AQ9BQG0 1328 aaKnown RBP29.05■■■□□ 2.24
SPIN3-244ENST00000640728 METP08581 1390 aa29.05■■■□□ 2.24
SPIN3-244ENST00000640728 SAFB2Q14151 953 aaKnown RBP eCLIP29.04■■■□□ 2.24
SPIN3-244ENST00000640728 TXNDC2Q86VQ3 553 aa29.04■■■□□ 2.24
SPIN3-244ENST00000640728 THEMISQ8N1K5 641 aaPredicted RBP29.04■■■□□ 2.24
SPIN3-244ENST00000640728 POGKQ9P215 609 aa29.04■■■□□ 2.24
SPIN3-244ENST00000640728 ARHGAP23Q9P227 1491 aa29.04■■■□□ 2.24
SPIN3-244ENST00000640728 RIMS1Q86UR5 1692 aaKnown RBP29.04■■■□□ 2.24
SPIN3-244ENST00000640728 PLEKHG1Q9ULL1 1385 aa29.03■■■□□ 2.24
SPIN3-244ENST00000640728 SLIT1O75093 1534 aa29.03■■■□□ 2.24
SPIN3-244ENST00000640728 DLC1Q96QB1 1528 aa29.03■■■□□ 2.24
SPIN3-244ENST00000640728 TULP4Q9NRJ4 1543 aa29.03■■■□□ 2.24
SPIN3-244ENST00000640728 CC2D1BQ5T0F9 858 aaKnown RBP29.02■■■□□ 2.24
SPIN3-244ENST00000640728 EID1Q9Y6B2 187 aa29.02■■■□□ 2.24
SPIN3-244ENST00000640728 AMER1Q5JTC6 1135 aaPredicted RBP29.01■■■□□ 2.23
SPIN3-244ENST00000640728 BCANQ96GW7 911 aa29.01■■■□□ 2.23
SPIN3-244ENST00000640728 ADAMTS13Q76LX8 1427 aa29■■■□□ 2.23
SPIN3-244ENST00000640728 BRD4O60885 1362 aaPredicted RBP28.98■■■□□ 2.23
SPIN3-244ENST00000640728 NPC1L1Q9UHC9 1359 aa28.97■■■□□ 2.23
SPIN3-244ENST00000640728 MINK1Q8N4C8 1332 aaPredicted RBP28.97■■■□□ 2.23
SPIN3-244ENST00000640728 FAM9BQ8IZU0 186 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms