RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	TRERF1	Q96PN7	1200 aa		14.02	□□□□□ -0.16
SPIN3-231	ENST00000639895	ROCK2	O75116	1388 aa	Known RBP	14.02	□□□□□ -0.16
SPIN3-231	ENST00000639895	NAIP	Q13075	1403 aa		14.02	□□□□□ -0.16
SPIN3-231	ENST00000639895	KCNJ4	P48050	445 aa		14.02	□□□□□ -0.17
SPIN3-231	ENST00000639895	PPP4R3B	Q5MIZ7	849 aa		14.02	□□□□□ -0.17
SPIN3-231	ENST00000639895	ITPRIP	Q8IWB1	547 aa		14.02	□□□□□ -0.17
SPIN3-231	ENST00000639895	ZNF592	Q92610	1267 aa		14.01	□□□□□ -0.17
SPIN3-231	ENST00000639895	DIAPH3	Q9NSV4	1193 aa		14.01	□□□□□ -0.17
SPIN3-231	ENST00000639895	ERICH4	A6NGS2	130 aa		14.01	□□□□□ -0.17
SPIN3-231	ENST00000639895	KIF3A	Q9Y496	699 aa		14.01	□□□□□ -0.17
SPIN3-231	ENST00000639895	USP47	Q96K76	1375 aa		14.01	□□□□□ -0.17
SPIN3-231	ENST00000639895	NUP155	O75694	1391 aa		14.01	□□□□□ -0.17
SPIN3-231	ENST00000639895	CARMIL2	Q6F5E8	1435 aa		14	□□□□□ -0.17
SPIN3-231	ENST00000639895	ERCC6	Q03468	1493 aa		14	□□□□□ -0.17
SPIN3-231	ENST00000639895	CUL7	Q14999	1698 aa		14	□□□□□ -0.17
SPIN3-231	ENST00000639895	U2SURP	O15042	1029 aa	Known RBP	13.99	□□□□□ -0.17
SPIN3-231	ENST00000639895	GOLGA6L6	A8MZA4	724 aa		13.98	□□□□□ -0.17
SPIN3-231	ENST00000639895	NOL8	Q76FK4	1167 aa	Known RBP	13.98	□□□□□ -0.17
SPIN3-231	ENST00000639895	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.98	□□□□□ -0.17
SPIN3-231	ENST00000639895	BRD4	O60885	1362 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	LETM1	O95202	739 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	CCDC94	Q9BW85	323 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	APAF1	O14727	1248 aa		13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	PHF14	O94880	888 aa		13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	PDZRN3	Q9UPQ7	1066 aa		13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	ZNF644	Q9H582	1327 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	PRPF40A	O75400	957 aa	Known RBP	13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	TMF1	P82094	1093 aa		13.97	□□□□□ -0.17
SPIN3-231	ENST00000639895	BCAR3	O75815	825 aa		13.95	□□□□□ -0.18
SPIN3-231	ENST00000639895	NBPF8	Q3BBV2	869 aa		13.95	□□□□□ -0.18
SPIN3-231	ENST00000639895	TNPO1	Q92973	898 aa	Known RBP	13.95	□□□□□ -0.18
SPIN3-231	ENST00000639895	GTPBP4	Q9BZE4	634 aa	Known RBP	13.95	□□□□□ -0.18
SPIN3-231	ENST00000639895	MIA2	Q96PC5	1412 aa		13.95	□□□□□ -0.18
SPIN3-231	ENST00000639895	APBB1	O00213	710 aa		13.95	□□□□□ -0.18
SPIN3-231	ENST00000639895	GOLGA6L4	A6NEF3	574 aa		13.94	□□□□□ -0.18
SPIN3-231	ENST00000639895	ADAMTS8	Q9UP79	889 aa		13.94	□□□□□ -0.18
SPIN3-231	ENST00000639895	NUCB2	P80303	420 aa		13.94	□□□□□ -0.18
SPIN3-231	ENST00000639895	PANK3	Q9H999	370 aa		13.93	□□□□□ -0.18
SPIN3-231	ENST00000639895	KIF20A	O95235	890 aa		13.93	□□□□□ -0.18
SPIN3-231	ENST00000639895	RRP7A	Q9Y3A4	280 aa	Known RBP	13.92	□□□□□ -0.18
SPIN3-231	ENST00000639895	HECW1	Q76N89	1606 aa		13.92	□□□□□ -0.18
SPIN3-231	ENST00000639895	SEC24B	O95487	1268 aa		13.92	□□□□□ -0.18
SPIN3-231	ENST00000639895	IRX3	P78415	501 aa	Predicted RBP	13.92	□□□□□ -0.18
SPIN3-231	ENST00000639895	CFAP43	Q8NDM7	1665 aa		13.92	□□□□□ -0.18
SPIN3-231	ENST00000639895	PTPN23	Q9H3S7	1636 aa		13.92	□□□□□ -0.18
SPIN3-231	ENST00000639895	ST18	O60284	1047 aa		13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	IFT57	Q9NWB7	429 aa		13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	HTATSF1	O43719	755 aa	Known RBP	13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	SMC4	Q9NTJ3	1288 aa		13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	FAM177B	A6PVY3	158 aa		13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	RNF123	Q5XPI4	1314 aa		13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	NRDC	O43847	1150 aa		13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	ZRSR1	Q15695	479 aa	Known RBP	13.91	□□□□□ -0.18
SPIN3-231	ENST00000639895	NPHP1	O15259	732 aa		13.9	□□□□□ -0.18
SPIN3-231	ENST00000639895	CHGA	P10645	457 aa	Known RBP	13.9	□□□□□ -0.18
SPIN3-231	ENST00000639895	LNPK	Q9C0E8	428 aa		13.9	□□□□□ -0.18
SPIN3-231	ENST00000639895	CDCA8	Q53HL2	280 aa		13.9	□□□□□ -0.18
SPIN3-231	ENST00000639895	JPH4	Q96JJ6	628 aa		13.9	□□□□□ -0.18
SPIN3-231	ENST00000639895	GOLGA6L1	Q8N7Z2	621 aa		13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	CFAP53	Q96M91	514 aa		13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	GRIN2B	Q13224	1484 aa		13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	TEX35	Q5T0J7	233 aa		13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	TBC1D32	Q96NH3	1257 aa		13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	PRDM2	Q13029	1718 aa		13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	EPRS	P07814	1512 aa	Known RBP	13.89	□□□□□ -0.19
SPIN3-231	ENST00000639895	ANKRD45	Q5TZF3	282 aa		13.88	□□□□□ -0.19
SPIN3-231	ENST00000639895	PTPRK	Q15262	1439 aa		13.88	□□□□□ -0.19
SPIN3-231	ENST00000639895	KIF16B	Q96L93	1317 aa		13.88	□□□□□ -0.19
SPIN3-231	ENST00000639895	SYCE3	A1L190	88 aa		13.88	□□□□□ -0.19
SPIN3-231	ENST00000639895	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
SPIN3-231	ENST00000639895	ZKSCAN5	Q9Y2L8	839 aa		13.87	□□□□□ -0.19
SPIN3-231	ENST00000639895	CDK13	Q14004	1512 aa	Known RBP	13.87	□□□□□ -0.19
SPIN3-231	ENST00000639895	SSFA2	P28290	1259 aa		13.87	□□□□□ -0.19
SPIN3-231	ENST00000639895	TSPY26P	Q9H489	355 aa		13.87	□□□□□ -0.19
SPIN3-231	ENST00000639895	LAMC3	Q9Y6N6	1575 aa		13.86	□□□□□ -0.19
SPIN3-231	ENST00000639895	NBPF1	Q3BBV0	1214 aa		13.86	□□□□□ -0.19
SPIN3-231	ENST00000639895	TIGD1	Q96MW7	591 aa		13.86	□□□□□ -0.19
SPIN3-231	ENST00000639895	SPC24	Q8NBT2	197 aa		13.86	□□□□□ -0.19
SPIN3-231	ENST00000639895	TSC1	Q92574	1164 aa		13.86	□□□□□ -0.19
SPIN3-231	ENST00000639895	ERBB4	Q15303	1308 aa		13.86	□□□□□ -0.19
SPIN3-231	ENST00000639895	URB2	Q14146	1524 aa	Known RBP	13.86	□□□□□ -0.19
SPIN3-231	ENST00000639895	IPO4	Q8TEX9	1081 aa	Known RBP	13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	FSD2	A1L4K1	749 aa		13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	IGHD	P01880	384 aa		13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	DAPK1	P53355	1430 aa		13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	DMTN	Q08495	405 aa		13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	GPS2	Q13227	327 aa		13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	DNAJC2	Q99543	621 aa	Known RBP	13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	CALCOCO1	Q9P1Z2	691 aa		13.85	□□□□□ -0.19
SPIN3-231	ENST00000639895	MCC	P23508	829 aa		13.84	□□□□□ -0.19
SPIN3-231	ENST00000639895	MCM5	P33992	734 aa		13.84	□□□□□ -0.19
SPIN3-231	ENST00000639895	EIF3A	Q14152	1382 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-231	ENST00000639895		K7ELQ4	463 aa	Predicted RBP	13.84	□□□□□ -0.19
SPIN3-231	ENST00000639895	TERF1	P54274	439 aa		13.84	□□□□□ -0.19
SPIN3-231	ENST00000639895	IPO8	O15397	1037 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-231	ENST00000639895	ZKSCAN2	Q63HK3	967 aa		13.83	□□□□□ -0.2
SPIN3-231	ENST00000639895	ANKRD50	Q9ULJ7	1429 aa		13.83	□□□□□ -0.2
SPIN3-231	ENST00000639895	IQGAP2	Q13576	1575 aa		13.83	□□□□□ -0.2
SPIN3-231	ENST00000639895	MBD3	O95983	291 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms