RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 EPAS1Q99814 870 aa7.7□□□□□ -1.18
CDRT1-208ENST00000630868 PCDHGA10Q9Y5H3 936 aa7.7□□□□□ -1.18
CDRT1-208ENST00000630868 ADGRG1Q9Y653 693 aa7.7□□□□□ -1.18
CDRT1-208ENST00000630868 ARAP1Q96P48 1450 aa7.69□□□□□ -1.18
CDRT1-208ENST00000630868 ABCC8Q09428 1581 aa7.69□□□□□ -1.18
CDRT1-208ENST00000630868 POM121CA8CG34 1229 aa7.69□□□□□ -1.18
CDRT1-208ENST00000630868 IER5LQ5T953 404 aa7.69□□□□□ -1.18
CDRT1-208ENST00000630868 CYB5RLQ6IPT4 315 aa7.69□□□□□ -1.18
CDRT1-208ENST00000630868 PADI6Q6TGC4 694 aa7.69□□□□□ -1.18
CDRT1-208ENST00000630868 EIF4G3O43432 1585 aaKnown RBP7.68□□□□□ -1.18
CDRT1-208ENST00000630868 FOXD4L5Q5VV16 416 aaPredicted RBP7.68□□□□□ -1.18
CDRT1-208ENST00000630868 PPP2R2DQ66LE6 453 aa7.68□□□□□ -1.18
CDRT1-208ENST00000630868 FOXD4L4Q8WXT5 416 aaPredicted RBP7.68□□□□□ -1.18
CDRT1-208ENST00000630868 GLMNQ92990 594 aa7.68□□□□□ -1.18
CDRT1-208ENST00000630868 ATMINO43313 823 aaPredicted RBP7.67□□□□□ -1.18
CDRT1-208ENST00000630868 PPP1R15AO75807 674 aaPredicted RBP7.67□□□□□ -1.18
CDRT1-208ENST00000630868 PLCG2P16885 1265 aa7.67□□□□□ -1.18
CDRT1-208ENST00000630868 TMEM259Q4ZIN3 620 aa7.67□□□□□ -1.18
CDRT1-208ENST00000630868 SLAIN1Q8ND83 568 aa7.67□□□□□ -1.18
CDRT1-208ENST00000630868 ZNF428Q96B54 188 aa7.67□□□□□ -1.18
CDRT1-208ENST00000630868 CCDC88BA6NC98 1476 aa7.67□□□□□ -1.18
CDRT1-208ENST00000630868 OATP04181 439 aa7.66□□□□□ -1.18
CDRT1-208ENST00000630868 ABL2P42684 1182 aa7.66□□□□□ -1.18
CDRT1-208ENST00000630868 L3MBTL3Q96JM7 780 aaPredicted RBP7.66□□□□□ -1.18
CDRT1-208ENST00000630868 CALR3Q96L12 384 aaKnown RBP7.66□□□□□ -1.18
CDRT1-208ENST00000630868 TBC1D2BQ9UPU7 963 aa7.66□□□□□ -1.18
CDRT1-208ENST00000630868 DNMBPQ6XZF7 1577 aa7.66□□□□□ -1.18
CDRT1-208ENST00000630868 TARBP1Q13395 1621 aaKnown RBP7.66□□□□□ -1.18
CDRT1-208ENST00000630868 AQRO60306 1485 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDRT1-208ENST00000630868 ASTLQ6HA08 431 aaPredicted RBP7.65□□□□□ -1.18
CDRT1-208ENST00000630868 TYW1BQ6NUM6 668 aa7.65□□□□□ -1.18
CDRT1-208ENST00000630868 CHD1O14646 1710 aa7.64□□□□□ -1.19
CDRT1-208ENST00000630868 RIC3Q7Z5B4 369 aa7.64□□□□□ -1.19
CDRT1-208ENST00000630868 SLC34A2O95436 690 aa7.63□□□□□ -1.19
CDRT1-208ENST00000630868 TTC13Q8NBP0 860 aa7.63□□□□□ -1.19
CDRT1-208ENST00000630868 SPIRE2Q8WWL2 714 aa7.63□□□□□ -1.19
CDRT1-208ENST00000630868 SOCS7O14512 581 aa7.62□□□□□ -1.19
CDRT1-208ENST00000630868 DIXDC1Q155Q3 683 aa7.62□□□□□ -1.19
CDRT1-208ENST00000630868 FBXW7Q969H0 707 aa7.62□□□□□ -1.19
CDRT1-208ENST00000630868 POLA1P09884 1462 aaPredicted RBP7.62□□□□□ -1.19
CDRT1-208ENST00000630868 RBM25P49756 843 aaKnown RBP7.61□□□□□ -1.19
CDRT1-208ENST00000630868 QPCTQ16769 361 aa7.61□□□□□ -1.19
CDRT1-208ENST00000630868 ADAMTS19Q8TE59 1207 aa7.61□□□□□ -1.19
CDRT1-208ENST00000630868 JPH4Q96JJ6 628 aa7.61□□□□□ -1.19
CDRT1-208ENST00000630868 COLQQ9Y215 455 aaPredicted RBP7.61□□□□□ -1.19
CDRT1-208ENST00000630868 CLASP1Q7Z460 1538 aa7.61□□□□□ -1.19
CDRT1-208ENST00000630868 SPTLC1O15269 473 aa7.6□□□□□ -1.19
CDRT1-208ENST00000630868 CSPP1Q1MSJ5 1256 aa7.6□□□□□ -1.19
CDRT1-208ENST00000630868 TUSC1Q2TAM9 212 aa7.6□□□□□ -1.19
CDRT1-208ENST00000630868 RSBN1LQ6PCB5 846 aaPredicted RBP7.6□□□□□ -1.19
CDRT1-208ENST00000630868 WWC1Q8IX03 1113 aa7.6□□□□□ -1.19
CDRT1-208ENST00000630868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
CDRT1-208ENST00000630868 USP17L8P0C7I0 530 aa7.59□□□□□ -1.19
CDRT1-208ENST00000630868 CD46P15529 392 aa7.59□□□□□ -1.19
CDRT1-208ENST00000630868 PBXIP1Q96AQ6 731 aa7.59□□□□□ -1.19
CDRT1-208ENST00000630868 RBM27Q9P2N5 1060 aaKnown RBP7.59□□□□□ -1.19
CDRT1-208ENST00000630868 WDR97A6NE52 1622 aa7.59□□□□□ -1.19
CDRT1-208ENST00000630868 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
CDRT1-208ENST00000630868 MOXD2PA6NHM9 499 aa7.58□□□□□ -1.2
CDRT1-208ENST00000630868 CFAP70Q5T0N1 1121 aa7.58□□□□□ -1.2
CDRT1-208ENST00000630868 C6orf132Q5T0Z8 1188 aa7.58□□□□□ -1.2
CDRT1-208ENST00000630868 CERKQ8TCT0 537 aa7.58□□□□□ -1.2
CDRT1-208ENST00000630868 ACIN1Q9UKV3 1341 aaKnown RBP7.57□□□□□ -1.2
CDRT1-208ENST00000630868 RAD54L2Q9Y4B4 1467 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 CARNS1A5YM72 827 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 GPR37L1O60883 481 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 LILRB3O75022 631 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 IGSF3O75054 1194 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 AP1G2O75843 785 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 FOSBP53539 338 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 RTL5Q5HYW3 569 aaPredicted RBP7.57□□□□□ -1.2
CDRT1-208ENST00000630868 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
CDRT1-208ENST00000630868 PCDHGA4Q9Y5G9 962 aa7.57□□□□□ -1.2
CDRT1-208ENST00000630868 TDRD9Q8NDG6 1382 aaKnown RBP7.57□□□□□ -1.2
CDRT1-208ENST00000630868 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
CDRT1-208ENST00000630868 MAGI1Q96QZ7 1491 aaPredicted RBP7.56□□□□□ -1.2
CDRT1-208ENST00000630868 SOGA1O94964 1423 aa7.56□□□□□ -1.2
CDRT1-208ENST00000630868 NDUFV2P19404 249 aa7.56□□□□□ -1.2
CDRT1-208ENST00000630868 SRPK2P78362 688 aaKnown RBP7.56□□□□□ -1.2
CDRT1-208ENST00000630868 KCNA1Q09470 495 aa7.56□□□□□ -1.2
CDRT1-208ENST00000630868 RBM46Q8TBY0 533 aaKnown RBP7.56□□□□□ -1.2
CDRT1-208ENST00000630868 USTQ9Y2C2 406 aa7.56□□□□□ -1.2
CDRT1-208ENST00000630868 PCDHB15Q9Y5E8 787 aa7.56□□□□□ -1.2
CDRT1-208ENST00000630868 BRD1O95696 1058 aa7.55□□□□□ -1.2
CDRT1-208ENST00000630868 RFX1P22670 979 aa7.55□□□□□ -1.2
CDRT1-208ENST00000630868 PDE4CQ08493 712 aa7.55□□□□□ -1.2
CDRT1-208ENST00000630868 ZNF710Q8N1W2 664 aa7.55□□□□□ -1.2
CDRT1-208ENST00000630868 CABLES1Q8TDN4 633 aa7.55□□□□□ -1.2
CDRT1-208ENST00000630868 FAM198AQ9UFP1 575 aa7.55□□□□□ -1.2
CDRT1-208ENST00000630868 SYNJ1O43426 1573 aa7.54□□□□□ -1.2
CDRT1-208ENST00000630868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.54□□□□□ -1.2
CDRT1-208ENST00000630868 LOC105371045A0A1W2PR82 267 aa7.54□□□□□ -1.2
CDRT1-208ENST00000630868 RCCD1A6NED2 376 aa7.54□□□□□ -1.2
CDRT1-208ENST00000630868 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
CDRT1-208ENST00000630868 PRSS12P56730 875 aa7.54□□□□□ -1.2
CDRT1-208ENST00000630868 HDGFL1Q5TGJ6 251 aa7.54□□□□□ -1.2
CDRT1-208ENST00000630868 PRM3Q9NNZ6 103 aa7.54□□□□□ -1.2
CDRT1-208ENST00000630868 SYNJ2O15056 1496 aa7.54□□□□□ -1.2
CDRT1-208ENST00000630868 POTEFA5A3E0 1075 aa7.53□□□□□ -1.2
CDRT1-208ENST00000630868 SEC24BO95487 1268 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms