RNA–Protein interactions for RNA: ENST00000630539.1

CLPTM1L-216, Transcript of CLPTM1 like, humanhuman

TSL 5 BASIC

Gene CLPTM1L, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-216ENST00000630539 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
CLPTM1L-216ENST00000630539 ADGRF5Q8IZF2 1346 aa23.4■■□□□ 1.34
CLPTM1L-216ENST00000630539 ZNF142P52746 1687 aaPredicted RBP23.4■■□□□ 1.34
CLPTM1L-216ENST00000630539 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
CLPTM1L-216ENST00000630539 MYOM2P54296 1465 aa23.38■■□□□ 1.33
CLPTM1L-216ENST00000630539 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
CLPTM1L-216ENST00000630539 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
CLPTM1L-216ENST00000630539 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
CLPTM1L-216ENST00000630539 ZFYVE9O95405 1425 aa23.36■■□□□ 1.33
CLPTM1L-216ENST00000630539 TMEM2Q9UHN6 1383 aa23.36■■□□□ 1.33
CLPTM1L-216ENST00000630539 NRXN1Q9ULB1 1477 aa23.33■■□□□ 1.33
CLPTM1L-216ENST00000630539 THEMISQ8N1K5 641 aaPredicted RBP23.33■■□□□ 1.32
CLPTM1L-216ENST00000630539 TRPM1Q7Z4N2 1603 aa23.32■■□□□ 1.32
CLPTM1L-216ENST00000630539 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
CLPTM1L-216ENST00000630539 PIK3C2GO75747 1445 aa23.32■■□□□ 1.32
CLPTM1L-216ENST00000630539 SLIT1O75093 1534 aa23.3■■□□□ 1.32
CLPTM1L-216ENST00000630539 LTKP29376 864 aa23.3■■□□□ 1.32
CLPTM1L-216ENST00000630539 STAC3Q96MF2 364 aa23.3■■□□□ 1.32
CLPTM1L-216ENST00000630539 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
CLPTM1L-216ENST00000630539 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
CLPTM1L-216ENST00000630539 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
CLPTM1L-216ENST00000630539 CFAP70Q5T0N1 1121 aa23.28■■□□□ 1.32
CLPTM1L-216ENST00000630539 TXNDC2Q86VQ3 553 aa23.27■■□□□ 1.32
CLPTM1L-216ENST00000630539 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.32
CLPTM1L-216ENST00000630539 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLPTM1L-216ENST00000630539 LMTK3Q96Q04 1460 aa23.24■■□□□ 1.31
CLPTM1L-216ENST00000630539 EID1Q9Y6B2 187 aa23.24■■□□□ 1.31
CLPTM1L-216ENST00000630539 SCAF11Q99590 1463 aaKnown RBP23.23■■□□□ 1.31
CLPTM1L-216ENST00000630539 NRXN3Q9Y4C0 1643 aa23.23■■□□□ 1.31
CLPTM1L-216ENST00000630539 HDGFP51858 240 aaKnown RBP23.23■■□□□ 1.31
CLPTM1L-216ENST00000630539 HSPA2P54652 639 aa23.23■■□□□ 1.31
CLPTM1L-216ENST00000630539 IQGAP1P46940 1657 aa23.23■■□□□ 1.31
CLPTM1L-216ENST00000630539 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
CLPTM1L-216ENST00000630539 KIAA1210Q9ULL0 1709 aa23.21■■□□□ 1.31
CLPTM1L-216ENST00000630539 BCANQ96GW7 911 aa23.21■■□□□ 1.31
CLPTM1L-216ENST00000630539 C14orf93Q9H972 538 aaKnown RBP23.2■■□□□ 1.3
CLPTM1L-216ENST00000630539 HIRIP3Q9BW71 556 aaPredicted RBP23.2■■□□□ 1.3
CLPTM1L-216ENST00000630539 TMEM132EQ6IEE7 984 aa23.19■■□□□ 1.3
CLPTM1L-216ENST00000630539 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
CLPTM1L-216ENST00000630539 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
CLPTM1L-216ENST00000630539 LAMC1P11047 1609 aa23.18■■□□□ 1.3
CLPTM1L-216ENST00000630539 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
CLPTM1L-216ENST00000630539 ANKLE2Q86XL3 938 aa23.18■■□□□ 1.3
CLPTM1L-216ENST00000630539 GPRASP1Q5JY77 1395 aa23.17■■□□□ 1.3
CLPTM1L-216ENST00000630539 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
CLPTM1L-216ENST00000630539 SETD1AO15047 1707 aaKnown RBP23.17■■□□□ 1.3
CLPTM1L-216ENST00000630539 ADGRB1O14514 1584 aa23.17■■□□□ 1.3
CLPTM1L-216ENST00000630539 POLR1AO95602 1720 aaPredicted RBP23.16■■□□□ 1.3
CLPTM1L-216ENST00000630539 SLC26A8Q96RN1 970 aa23.15■■□□□ 1.3
CLPTM1L-216ENST00000630539 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
CLPTM1L-216ENST00000630539 USP47Q96K76 1375 aa23.14■■□□□ 1.3
CLPTM1L-216ENST00000630539 ADAMTS13Q76LX8 1427 aa23.14■■□□□ 1.3
CLPTM1L-216ENST00000630539 DIEXFQ68CQ4 756 aaKnown RBP23.13■■□□□ 1.29
CLPTM1L-216ENST00000630539 METP08581 1390 aa23.11■■□□□ 1.29
CLPTM1L-216ENST00000630539 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
CLPTM1L-216ENST00000630539 EIF4G2P78344 907 aaKnown RBP eCLIP23.11■■□□□ 1.299e-7■■■■■ 29.2
CLPTM1L-216ENST00000630539 STK26Q9P289 416 aa23.08■■□□□ 1.29
CLPTM1L-216ENST00000630539 MED14O60244 1454 aa23.08■■□□□ 1.28
CLPTM1L-216ENST00000630539 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.28
CLPTM1L-216ENST00000630539 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.28
CLPTM1L-216ENST00000630539 NPHP4O75161 1426 aaPredicted RBP23.07■■□□□ 1.28
CLPTM1L-216ENST00000630539 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
CLPTM1L-216ENST00000630539 YTHDC2Q9H6S0 1430 aaKnown RBP23.05■■□□□ 1.28
CLPTM1L-216ENST00000630539 STRCQ7RTU9 1775 aa23.05■■□□□ 1.28
CLPTM1L-216ENST00000630539 DIP2AQ14689 1571 aa23.03■■□□□ 1.28
CLPTM1L-216ENST00000630539 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
CLPTM1L-216ENST00000630539 ARHGEF28Q8N1W1 1705 aaKnown RBP23.02■■□□□ 1.28
CLPTM1L-216ENST00000630539 PTPRUQ92729 1446 aa23■■□□□ 1.27
CLPTM1L-216ENST00000630539 LRPPRCP42704 1394 aaKnown RBP22.99■■□□□ 1.27
CLPTM1L-216ENST00000630539 EIF3AQ14152 1382 aaKnown RBP22.99■■□□□ 1.27
CLPTM1L-216ENST00000630539 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
CLPTM1L-216ENST00000630539 ABCC11Q96J66 1382 aa22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 TESK2Q96S53 571 aa22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 KNDC1Q76NI1 1749 aa22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 CENPJQ9HC77 1338 aaPredicted RBP22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 C11orf95C9JLR9 678 aaPredicted RBP22.94■■□□□ 1.26
CLPTM1L-216ENST00000630539 PLEKHH1Q9ULM0 1364 aa22.93■■□□□ 1.26
CLPTM1L-216ENST00000630539 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
CLPTM1L-216ENST00000630539 WAPLQ7Z5K2 1190 aa22.93■■□□□ 1.26
CLPTM1L-216ENST00000630539 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
CLPTM1L-216ENST00000630539 ROBO2Q9HCK4 1378 aa22.92■■□□□ 1.26
CLPTM1L-216ENST00000630539 CPS1P31327 1500 aa22.92■■□□□ 1.26
CLPTM1L-216ENST00000630539 XRN1Q8IZH2 1706 aaKnown RBP22.92■■□□□ 1.26
CLPTM1L-216ENST00000630539 TECPR2O15040 1411 aa22.92■■□□□ 1.26
CLPTM1L-216ENST00000630539 KCNA6P17658 529 aa22.91■■□□□ 1.26
CLPTM1L-216ENST00000630539 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
CLPTM1L-216ENST00000630539 DLC1Q96QB1 1528 aa22.91■■□□□ 1.26
CLPTM1L-216ENST00000630539 POGKQ9P215 609 aa22.9■■□□□ 1.26
CLPTM1L-216ENST00000630539 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.25
CLPTM1L-216ENST00000630539 WASHC2AQ641Q2 1341 aa22.87■■□□□ 1.25
CLPTM1L-216ENST00000630539 MINK1Q8N4C8 1332 aaPredicted RBP22.86■■□□□ 1.25
CLPTM1L-216ENST00000630539 RBM33Q96EV2 1170 aaKnown RBP22.86■■□□□ 1.25
CLPTM1L-216ENST00000630539 PTCH1Q13635 1447 aa22.86■■□□□ 1.25
CLPTM1L-216ENST00000630539 FAM135BQ49AJ0 1406 aa22.85■■□□□ 1.25
CLPTM1L-216ENST00000630539 POLR3GLQ9BT43 218 aa22.85■■□□□ 1.25
CLPTM1L-216ENST00000630539 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
CLPTM1L-216ENST00000630539 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms