RNA–Protein interactions for RNA: ENST00000629650.2

PPM1D-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 5 BASIC

Gene PPM1D, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-204ENST00000629650 PPLO60437 1756 aa28.17■■■□□ 2.1
PPM1D-204ENST00000629650 STAG3Q9UJ98 1225 aa28.16■■■□□ 2.1
PPM1D-204ENST00000629650 NLRP1Q9C000 1473 aa28.16■■■□□ 2.1
PPM1D-204ENST00000629650 NBPF8Q3BBV2 869 aa28.15■■■□□ 2.1
PPM1D-204ENST00000629650 ILDR1Q86SU0 546 aaPredicted RBP28.15■■■□□ 2.1
PPM1D-204ENST00000629650 KDM5AP29375 1690 aaKnown RBP28.14■■■□□ 2.09
PPM1D-204ENST00000629650 STAC3Q96MF2 364 aa28.13■■■□□ 2.09
PPM1D-204ENST00000629650 RPGRIP1LQ68CZ1 1315 aa28.13■■■□□ 2.09
PPM1D-204ENST00000629650 MYOM2P54296 1465 aa28.11■■■□□ 2.09
PPM1D-204ENST00000629650 PRAG1Q86YV5 1406 aa28.11■■■□□ 2.09
PPM1D-204ENST00000629650 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
PPM1D-204ENST00000629650 NEXMIFQ5QGS0 1516 aa28.11■■■□□ 2.09
PPM1D-204ENST00000629650 TRPM1Q7Z4N2 1603 aa28.06■■■□□ 2.08
PPM1D-204ENST00000629650 THEMISQ8N1K5 641 aaPredicted RBP28.06■■■□□ 2.08
PPM1D-204ENST00000629650 RALGAPBQ86X10 1494 aa28.04■■■□□ 2.08
PPM1D-204ENST00000629650 CERKQ8TCT0 537 aa28.02■■■□□ 2.08
PPM1D-204ENST00000629650 ADGRF5Q8IZF2 1346 aa28.02■■■□□ 2.08
PPM1D-204ENST00000629650 NRXN1Q9ULB1 1477 aa28.02■■■□□ 2.08
PPM1D-204ENST00000629650 VGFO15240 615 aaPredicted RBP28.01■■■□□ 2.07
PPM1D-204ENST00000629650 ZFYVE9O95405 1425 aa27.99■■■□□ 2.07
PPM1D-204ENST00000629650 RIMS2Q9UQ26 1411 aa27.99■■■□□ 2.07
PPM1D-204ENST00000629650 NUTM2DQ5VT03 806 aaPredicted RBP27.99■■■□□ 2.07
PPM1D-204ENST00000629650 ANKLE2Q86XL3 938 aa27.99■■■□□ 2.07
PPM1D-204ENST00000629650 KIAA1210Q9ULL0 1709 aa27.98■■■□□ 2.07
PPM1D-204ENST00000629650 POLR1AO95602 1720 aaPredicted RBP27.98■■■□□ 2.07
PPM1D-204ENST00000629650 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
PPM1D-204ENST00000629650 PIK3C2GO75747 1445 aa27.96■■■□□ 2.07
PPM1D-204ENST00000629650 ROCK2O75116 1388 aaKnown RBP27.95■■■□□ 2.06
PPM1D-204ENST00000629650 TMEM2Q9UHN6 1383 aa27.95■■■□□ 2.06
PPM1D-204ENST00000629650 ZNF335Q9H4Z2 1342 aaPredicted RBP27.92■■■□□ 2.06
PPM1D-204ENST00000629650 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.92■■■□□ 2.06
PPM1D-204ENST00000629650 HDGFP51858 240 aaKnown RBP27.92■■■□□ 2.06
PPM1D-204ENST00000629650 LAMC1P11047 1609 aa27.91■■■□□ 2.06
PPM1D-204ENST00000629650 LTBP4Q8N2S1 1624 aa27.91■■■□□ 2.06
PPM1D-204ENST00000629650 NBPF1Q3BBV0 1214 aa27.91■■■□□ 2.06
PPM1D-204ENST00000629650 SLIT1O75093 1534 aa27.9■■■□□ 2.06
PPM1D-204ENST00000629650 CARD11Q9BXL7 1154 aa27.9■■■□□ 2.06
PPM1D-204ENST00000629650 GPRASP1Q5JY77 1395 aa27.89■■■□□ 2.06
PPM1D-204ENST00000629650 ARHGAP23Q9P227 1491 aa27.89■■■□□ 2.06
PPM1D-204ENST00000629650 CFAP70Q5T0N1 1121 aa27.88■■■□□ 2.05
PPM1D-204ENST00000629650 EIF4G2P78344 907 aaKnown RBP eCLIP27.87■■■□□ 2.05
PPM1D-204ENST00000629650 ZNF316A6NFI3 1004 aaPredicted RBP27.86■■■□□ 2.05
PPM1D-204ENST00000629650 NPHP4O75161 1426 aaPredicted RBP27.86■■■□□ 2.05
PPM1D-204ENST00000629650 C14orf93Q9H972 538 aaKnown RBP27.86■■■□□ 2.05
PPM1D-204ENST00000629650 MED14O60244 1454 aa27.85■■■□□ 2.05
PPM1D-204ENST00000629650 SETBP1Q9Y6X0 1596 aa27.84■■■□□ 2.05
PPM1D-204ENST00000629650 LTKP29376 864 aa27.84■■■□□ 2.05
PPM1D-204ENST00000629650 TXNDC2Q86VQ3 553 aa27.84■■■□□ 2.05
PPM1D-204ENST00000629650 EID1Q9Y6B2 187 aa27.83■■■□□ 2.05
PPM1D-204ENST00000629650 USP47Q96K76 1375 aa27.83■■■□□ 2.05
PPM1D-204ENST00000629650 HSPA5P11021 654 aaKnown RBP27.82■■■□□ 2.04
PPM1D-204ENST00000629650 SENP3Q9H4L4 574 aaPredicted RBP27.82■■■□□ 2.04
PPM1D-204ENST00000629650 IQGAP1P46940 1657 aa27.8■■■□□ 2.04
PPM1D-204ENST00000629650 ALKQ9UM73 1620 aa27.8■■■□□ 2.04
PPM1D-204ENST00000629650 NRXN3Q9Y4C0 1643 aa27.8■■■□□ 2.04
PPM1D-204ENST00000629650 HIRIP3Q9BW71 556 aaPredicted RBP27.8■■■□□ 2.04
PPM1D-204ENST00000629650 SCAF11Q99590 1463 aaKnown RBP27.8■■■□□ 2.04
PPM1D-204ENST00000629650 ADGRB1O14514 1584 aa27.78■■■□□ 2.04
PPM1D-204ENST00000629650 PLEKHG1Q9ULL1 1385 aa27.77■■■□□ 2.04
PPM1D-204ENST00000629650 SETD1AO15047 1707 aaKnown RBP27.77■■■□□ 2.04
PPM1D-204ENST00000629650 BCANQ96GW7 911 aa27.74■■■□□ 2.03
PPM1D-204ENST00000629650 ASXL1Q8IXJ9 1541 aa27.74■■■□□ 2.03
PPM1D-204ENST00000629650 TMEM132EQ6IEE7 984 aa27.73■■■□□ 2.03
PPM1D-204ENST00000629650 ST20-MTHFSA0A0A6YYL1 179 aa27.68■■■□□ 2.02
PPM1D-204ENST00000629650 IQSEC2Q5JU85 1478 aa27.68■■■□□ 2.02
PPM1D-204ENST00000629650 ADAMTS13Q76LX8 1427 aa27.68■■■□□ 2.02
PPM1D-204ENST00000629650 EIF3AQ14152 1382 aaKnown RBP27.68■■■□□ 2.02
PPM1D-204ENST00000629650 STRCP1A6NGW2 1772 aa27.65■■■□□ 2.02
PPM1D-204ENST00000629650 DIP2AQ14689 1571 aa27.65■■■□□ 2.02
PPM1D-204ENST00000629650 YTHDC2Q9H6S0 1430 aaKnown RBP27.64■■■□□ 2.02
PPM1D-204ENST00000629650 CPS1P31327 1500 aa27.64■■■□□ 2.02
PPM1D-204ENST00000629650 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.01
PPM1D-204ENST00000629650 TRAK1Q9UPV9 953 aa27.63■■■□□ 2.01
PPM1D-204ENST00000629650 SLC26A8Q96RN1 970 aa27.62■■■□□ 2.01
PPM1D-204ENST00000629650 METP08581 1390 aa27.62■■■□□ 2.01
PPM1D-204ENST00000629650 STK26Q9P289 416 aa27.61■■■□□ 2.01
PPM1D-204ENST00000629650 UBAP1LF5GYI3 381 aa27.59■■■□□ 2.01
PPM1D-204ENST00000629650 TBX22Q9Y458 520 aa27.59■■■□□ 2.01
PPM1D-204ENST00000629650 LRPPRCP42704 1394 aaKnown RBP27.58■■■□□ 2.01
PPM1D-204ENST00000629650 KNDC1Q76NI1 1749 aa27.57■■■□□ 2
PPM1D-204ENST00000629650 QRICH2Q9H0J4 1663 aa27.56■■■□□ 2
PPM1D-204ENST00000629650 TESK2Q96S53 571 aa27.56■■■□□ 2
PPM1D-204ENST00000629650 CENPJQ9HC77 1338 aaPredicted RBP27.55■■■□□ 2
PPM1D-204ENST00000629650 DLC1Q96QB1 1528 aa27.54■■■□□ 2
PPM1D-204ENST00000629650 ABCC11Q96J66 1382 aa27.54■■■□□ 2
PPM1D-204ENST00000629650 C11orf95C9JLR9 678 aaPredicted RBP27.53■■■□□ 2
PPM1D-204ENST00000629650 LRRC7Q96NW7 1537 aa27.53■■■□□ 2
PPM1D-204ENST00000629650 WASHC2AQ641Q2 1341 aa27.51■■■□□ 2
PPM1D-204ENST00000629650 TECPR2O15040 1411 aa27.5■■□□□ 1.99
PPM1D-204ENST00000629650 CCDC7Q96M83 1385 aa27.5■■□□□ 1.99
PPM1D-204ENST00000629650 PIK3R4Q99570 1358 aa27.49■■□□□ 1.99
PPM1D-204ENST00000629650 SBNO2Q9Y2G9 1366 aa27.49■■□□□ 1.99
PPM1D-204ENST00000629650 KIF7Q2M1P5 1343 aa27.49■■□□□ 1.99
PPM1D-204ENST00000629650 PTPRUQ92729 1446 aa27.48■■□□□ 1.99
PPM1D-204ENST00000629650 KCNA6P17658 529 aa27.48■■□□□ 1.99
PPM1D-204ENST00000629650 TMF1P82094 1093 aa27.48■■□□□ 1.99
PPM1D-204ENST00000629650 PRAM1Q96QH2 718 aa27.47■■□□□ 1.99
PPM1D-204ENST00000629650 SLC24A1O60721 1099 aa27.46■■□□□ 1.99
PPM1D-204ENST00000629650 POGKQ9P215 609 aa27.46■■□□□ 1.99
PPM1D-204ENST00000629650 CHD2O14647 1828 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms