RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 IFT172Q9UG01 1749 aa25.34■■□□□ 1.65
SPTAN1-217ENST00000629089 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
SPTAN1-217ENST00000629089 NUTM2DQ5VT03 806 aaPredicted RBP25.32■■□□□ 1.64
SPTAN1-217ENST00000629089 STAC3Q96MF2 364 aa25.32■■□□□ 1.64
SPTAN1-217ENST00000629089 RIMS2Q9UQ26 1411 aa25.31■■□□□ 1.64
SPTAN1-217ENST00000629089 TMEM2Q9UHN6 1383 aa25.31■■□□□ 1.64
SPTAN1-217ENST00000629089 HDGFP51858 240 aaKnown RBP25.3■■□□□ 1.64
SPTAN1-217ENST00000629089 VGFO15240 615 aaPredicted RBP25.29■■□□□ 1.64
SPTAN1-217ENST00000629089 MYOM2P54296 1465 aa25.29■■□□□ 1.64
SPTAN1-217ENST00000629089 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.28■■□□□ 1.64
SPTAN1-217ENST00000629089 ZFYVE9O95405 1425 aa25.28■■□□□ 1.64
SPTAN1-217ENST00000629089 SLIT1O75093 1534 aa25.28■■□□□ 1.64
SPTAN1-217ENST00000629089 EID1Q9Y6B2 187 aa25.26■■□□□ 1.63
SPTAN1-217ENST00000629089 ADGRF5Q8IZF2 1346 aa25.25■■□□□ 1.63
SPTAN1-217ENST00000629089 ARHGAP23Q9P227 1491 aa25.25■■□□□ 1.63
SPTAN1-217ENST00000629089 TXNDC2Q86VQ3 553 aa25.24■■□□□ 1.63
SPTAN1-217ENST00000629089 PRAG1Q86YV5 1406 aa25.23■■□□□ 1.63
SPTAN1-217ENST00000629089 LMTK3Q96Q04 1460 aa25.23■■□□□ 1.63
SPTAN1-217ENST00000629089 NBPF8Q3BBV2 869 aa25.22■■□□□ 1.63
SPTAN1-217ENST00000629089 LTKP29376 864 aa25.21■■□□□ 1.63
SPTAN1-217ENST00000629089 NRXN1Q9ULB1 1477 aa25.2■■□□□ 1.62
SPTAN1-217ENST00000629089 ANKLE2Q86XL3 938 aa25.2■■□□□ 1.62
SPTAN1-217ENST00000629089 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
SPTAN1-217ENST00000629089 SCAF11Q99590 1463 aaKnown RBP25.19■■□□□ 1.62
SPTAN1-217ENST00000629089 PIK3C2GO75747 1445 aa25.18■■□□□ 1.62
SPTAN1-217ENST00000629089 HSPA2P54652 639 aa25.17■■□□□ 1.62
SPTAN1-217ENST00000629089 BCANQ96GW7 911 aa25.17■■□□□ 1.62
SPTAN1-217ENST00000629089 PLEKHG1Q9ULL1 1385 aa25.14■■□□□ 1.62
SPTAN1-217ENST00000629089 TRPM1Q7Z4N2 1603 aa25.14■■□□□ 1.61
SPTAN1-217ENST00000629089 POLR1AO95602 1720 aaPredicted RBP25.13■■□□□ 1.61
SPTAN1-217ENST00000629089 CFAP70Q5T0N1 1121 aa25.12■■□□□ 1.61
SPTAN1-217ENST00000629089 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
SPTAN1-217ENST00000629089 NCKAP5LQ9HCH0 1330 aa25.11■■□□□ 1.61
SPTAN1-217ENST00000629089 RALGAPBQ86X10 1494 aa25.11■■□□□ 1.61
SPTAN1-217ENST00000629089 SETBP1Q9Y6X0 1596 aa25.1■■□□□ 1.61
SPTAN1-217ENST00000629089 ROCK2O75116 1388 aaKnown RBP25.1■■□□□ 1.61
SPTAN1-217ENST00000629089 KIAA1210Q9ULL0 1709 aa25.1■■□□□ 1.61
SPTAN1-217ENST00000629089 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
SPTAN1-217ENST00000629089 C14orf93Q9H972 538 aaKnown RBP25.1■■□□□ 1.61
SPTAN1-217ENST00000629089 LAMC1P11047 1609 aa25.1■■□□□ 1.61
SPTAN1-217ENST00000629089 NRXN3Q9Y4C0 1643 aa25.09■■□□□ 1.61
SPTAN1-217ENST00000629089 ALKQ9UM73 1620 aa25.08■■□□□ 1.61
SPTAN1-217ENST00000629089 NBPF1Q3BBV0 1214 aa25.07■■□□□ 1.6
SPTAN1-217ENST00000629089 NPHP4O75161 1426 aaPredicted RBP25.06■■□□□ 1.6
SPTAN1-217ENST00000629089 MED14O60244 1454 aa25.05■■□□□ 1.6
SPTAN1-217ENST00000629089 SLC26A8Q96RN1 970 aa25.04■■□□□ 1.6
SPTAN1-217ENST00000629089 CARD11Q9BXL7 1154 aa25.04■■□□□ 1.6
SPTAN1-217ENST00000629089 ADAMTS13Q76LX8 1427 aa25.04■■□□□ 1.6
SPTAN1-217ENST00000629089 SETD1AO15047 1707 aaKnown RBP25.02■■□□□ 1.6
SPTAN1-217ENST00000629089 TMEM132EQ6IEE7 984 aa25.02■■□□□ 1.6
SPTAN1-217ENST00000629089 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
SPTAN1-217ENST00000629089 GPRASP1Q5JY77 1395 aa25■■□□□ 1.59
SPTAN1-217ENST00000629089 STRCQ7RTU9 1775 aa25■■□□□ 1.59
SPTAN1-217ENST00000629089 TBX22Q9Y458 520 aa24.99■■□□□ 1.59
SPTAN1-217ENST00000629089 ADGRB1O14514 1584 aa24.99■■□□□ 1.59
SPTAN1-217ENST00000629089 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
SPTAN1-217ENST00000629089 METP08581 1390 aa24.97■■□□□ 1.59
SPTAN1-217ENST00000629089 STK26Q9P289 416 aa24.93■■□□□ 1.58
SPTAN1-217ENST00000629089 YTHDC2Q9H6S0 1430 aaKnown RBP24.93■■□□□ 1.58
SPTAN1-217ENST00000629089 TRAK1Q9UPV9 953 aa24.92■■□□□ 1.58
SPTAN1-217ENST00000629089 USP47Q96K76 1375 aa24.92■■□□□ 1.58
SPTAN1-217ENST00000629089 EIF4G2P78344 907 aaKnown RBP eCLIP24.91■■□□□ 1.58
SPTAN1-217ENST00000629089 PIK3R4Q99570 1358 aa24.9■■□□□ 1.58
SPTAN1-217ENST00000629089 LRPPRCP42704 1394 aaKnown RBP24.89■■□□□ 1.58
SPTAN1-217ENST00000629089 DMRT2Q9Y5R5 561 aa24.89■■□□□ 1.57
SPTAN1-217ENST00000629089 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
SPTAN1-217ENST00000629089 PTPRUQ92729 1446 aa24.87■■□□□ 1.57
SPTAN1-217ENST00000629089 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
SPTAN1-217ENST00000629089 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
SPTAN1-217ENST00000629089 ABCC11Q96J66 1382 aa24.85■■□□□ 1.57
SPTAN1-217ENST00000629089 KNDC1Q76NI1 1749 aa24.84■■□□□ 1.57
SPTAN1-217ENST00000629089 ARHGEF28Q8N1W1 1705 aaKnown RBP24.84■■□□□ 1.57
SPTAN1-217ENST00000629089 CHD2O14647 1828 aaKnown RBP24.84■■□□□ 1.57
SPTAN1-217ENST00000629089 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
SPTAN1-217ENST00000629089 ST20-MTHFSA0A0A6YYL1 179 aa24.83■■□□□ 1.57
SPTAN1-217ENST00000629089 DLC1Q96QB1 1528 aa24.82■■□□□ 1.56
SPTAN1-217ENST00000629089 TECPR2O15040 1411 aa24.81■■□□□ 1.56
SPTAN1-217ENST00000629089 XRN1Q8IZH2 1706 aaKnown RBP24.81■■□□□ 1.56
SPTAN1-217ENST00000629089 CPS1P31327 1500 aa24.81■■□□□ 1.56
SPTAN1-217ENST00000629089 KCNA6P17658 529 aa24.81■■□□□ 1.56
SPTAN1-217ENST00000629089 POGKQ9P215 609 aa24.81■■□□□ 1.56
SPTAN1-217ENST00000629089 CENPJQ9HC77 1338 aaPredicted RBP24.8■■□□□ 1.56
SPTAN1-217ENST00000629089 PRAM1Q96QH2 718 aa24.79■■□□□ 1.56
SPTAN1-217ENST00000629089 NWD1Q149M9 1564 aa24.78■■□□□ 1.56
SPTAN1-217ENST00000629089 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
SPTAN1-217ENST00000629089 SIRT1Q96EB6 747 aa24.77■■□□□ 1.56
SPTAN1-217ENST00000629089 ROBO2Q9HCK4 1378 aa24.77■■□□□ 1.56
SPTAN1-217ENST00000629089 PTCH1Q13635 1447 aa24.77■■□□□ 1.56
SPTAN1-217ENST00000629089 WAPLQ7Z5K2 1190 aa24.76■■□□□ 1.55
SPTAN1-217ENST00000629089 FAM135BQ49AJ0 1406 aa24.76■■□□□ 1.55
SPTAN1-217ENST00000629089 QRICH2Q9H0J4 1663 aa24.76■■□□□ 1.55
SPTAN1-217ENST00000629089 PLEKHH1Q9ULM0 1364 aa24.74■■□□□ 1.55
SPTAN1-217ENST00000629089 NKTRP30414 1462 aaKnown RBP24.72■■□□□ 1.55
SPTAN1-217ENST00000629089 ZNF335Q9H4Z2 1342 aaPredicted RBP24.71■■□□□ 1.55
SPTAN1-217ENST00000629089 STRCP1A6NGW2 1772 aa24.71■■□□□ 1.55
SPTAN1-217ENST00000629089 TESK2Q96S53 571 aa24.71■■□□□ 1.55
SPTAN1-217ENST00000629089 MINK1Q8N4C8 1332 aaPredicted RBP24.69■■□□□ 1.54
SPTAN1-217ENST00000629089 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
SPTAN1-217ENST00000629089 SLC24A1O60721 1099 aa24.69■■□□□ 1.54
SPTAN1-217ENST00000629089 PROSER2Q86WR7 435 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms