RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
PNKP-221ENST00000627317 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
PNKP-221ENST00000627317 PLEKHG1Q9ULL1 1385 aa21.8■■□□□ 1.08
PNKP-221ENST00000627317 HRCP23327 699 aa21.8■■□□□ 1.08
PNKP-221ENST00000627317 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
PNKP-221ENST00000627317 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
PNKP-221ENST00000627317 CLTCL1P53675 1640 aa21.79■■□□□ 1.08
PNKP-221ENST00000627317 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
PNKP-221ENST00000627317 NWD1Q149M9 1564 aa21.76■■□□□ 1.07
PNKP-221ENST00000627317 ADAMTS13Q76LX8 1427 aa21.73■■□□□ 1.07
PNKP-221ENST00000627317 UBAP1LF5GYI3 381 aa21.73■■□□□ 1.07
PNKP-221ENST00000627317 SLC26A8Q96RN1 970 aa21.72■■□□□ 1.07
PNKP-221ENST00000627317 MPHOSPH9Q99550 1183 aa21.72■■□□□ 1.07
PNKP-221ENST00000627317 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
PNKP-221ENST00000627317 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.71■■□□□ 1.07
PNKP-221ENST00000627317 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
PNKP-221ENST00000627317 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
PNKP-221ENST00000627317 KCNA6P17658 529 aa21.69■■□□□ 1.06
PNKP-221ENST00000627317 XIRP1Q702N8 1843 aaKnown RBP21.69■■□□□ 1.06
PNKP-221ENST00000627317 HDGFP51858 240 aaKnown RBP21.68■■□□□ 1.06
PNKP-221ENST00000627317 NEXMIFQ5QGS0 1516 aa21.68■■□□□ 1.06
PNKP-221ENST00000627317 NRXN3Q9Y4C0 1643 aa21.68■■□□□ 1.06
PNKP-221ENST00000627317 SETBP1Q9Y6X0 1596 aa21.67■■□□□ 1.06
PNKP-221ENST00000627317 PPP1R15AO75807 674 aaPredicted RBP21.67■■□□□ 1.06
PNKP-221ENST00000627317 NUTM2DQ5VT03 806 aaPredicted RBP21.66■■□□□ 1.06
PNKP-221ENST00000627317 TBX22Q9Y458 520 aa21.65■■□□□ 1.06
PNKP-221ENST00000627317 TMEM94Q12767 1356 aa21.64■■□□□ 1.06
PNKP-221ENST00000627317 FOXD1Q16676 465 aa21.64■■□□□ 1.05
PNKP-221ENST00000627317 CHD2O14647 1828 aaKnown RBP21.62■■□□□ 1.05
PNKP-221ENST00000627317 TOM1O60784 492 aa21.62■■□□□ 1.05
PNKP-221ENST00000627317 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
PNKP-221ENST00000627317 PIK3R4Q99570 1358 aa21.61■■□□□ 1.05
PNKP-221ENST00000627317 KIF1BO60333 1816 aa21.59■■□□□ 1.05
PNKP-221ENST00000627317 PTPRUQ92729 1446 aa21.59■■□□□ 1.05
PNKP-221ENST00000627317 BCANQ96GW7 911 aa21.59■■□□□ 1.05
PNKP-221ENST00000627317 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.05
PNKP-221ENST00000627317 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
PNKP-221ENST00000627317 XRN1Q8IZH2 1706 aaKnown RBP21.57■■□□□ 1.04
PNKP-221ENST00000627317 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
PNKP-221ENST00000627317 CCDC144AA2RUR9 1427 aa21.55■■□□□ 1.04
PNKP-221ENST00000627317 PROSER2Q86WR7 435 aaPredicted RBP21.55■■□□□ 1.04
PNKP-221ENST00000627317 METP08581 1390 aa21.54■■□□□ 1.04
PNKP-221ENST00000627317 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
PNKP-221ENST00000627317 RBM33Q96EV2 1170 aaKnown RBP21.54■■□□□ 1.04
PNKP-221ENST00000627317 HSPA1LP34931 641 aa21.53■■□□□ 1.04
PNKP-221ENST00000627317 NCOA3Q9Y6Q9 1424 aa21.53■■□□□ 1.04
PNKP-221ENST00000627317 RPGRIP1LQ68CZ1 1315 aa21.53■■□□□ 1.04
PNKP-221ENST00000627317 SETD1AO15047 1707 aaKnown RBP21.52■■□□□ 1.04
PNKP-221ENST00000627317 PPLO60437 1756 aa21.52■■□□□ 1.04
PNKP-221ENST00000627317 ANKRD30BQ9BXX2 1392 aa21.51■■□□□ 1.03
PNKP-221ENST00000627317 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
PNKP-221ENST00000627317 FAM135BQ49AJ0 1406 aa21.48■■□□□ 1.03
PNKP-221ENST00000627317 PRAG1Q86YV5 1406 aa21.48■■□□□ 1.03
PNKP-221ENST00000627317 AMOTL2Q9Y2J4 779 aa21.48■■□□□ 1.03
PNKP-221ENST00000627317 IFT172Q9UG01 1749 aa21.47■■□□□ 1.03
PNKP-221ENST00000627317 VGFO15240 615 aaPredicted RBP21.47■■□□□ 1.03
PNKP-221ENST00000627317 MSH6P52701 1360 aa21.47■■□□□ 1.03
PNKP-221ENST00000627317 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
PNKP-221ENST00000627317 ROBO1Q9Y6N7 1651 aa21.42■■□□□ 1.02
PNKP-221ENST00000627317 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
PNKP-221ENST00000627317 DCCP43146 1447 aa21.41■■□□□ 1.02
PNKP-221ENST00000627317 ADGRF5Q8IZF2 1346 aa21.41■■□□□ 1.02
PNKP-221ENST00000627317 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
PNKP-221ENST00000627317 NRXN1Q9ULB1 1477 aa21.4■■□□□ 1.02
PNKP-221ENST00000627317 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.01
PNKP-221ENST00000627317 RGL3Q3MIN7 710 aa21.38■■□□□ 1.01
PNKP-221ENST00000627317 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
PNKP-221ENST00000627317 SLAIN2Q9P270 581 aa21.38■■□□□ 1.01
PNKP-221ENST00000627317 MYOM2P54296 1465 aa21.38■■□□□ 1.01
PNKP-221ENST00000627317 ROBO2Q9HCK4 1378 aa21.37■■□□□ 1.01
PNKP-221ENST00000627317 ADGRL3Q9HAR2 1447 aa21.37■■□□□ 1.01
PNKP-221ENST00000627317 MED1Q15648 1581 aaPredicted RBP21.36■■□□□ 1.01
PNKP-221ENST00000627317 DISP3Q9P2K9 1392 aa21.36■■□□□ 1.01
PNKP-221ENST00000627317 NALCNQ8IZF0 1738 aa21.35■■□□□ 1.01
PNKP-221ENST00000627317 CCER1Q8TC90 406 aaPredicted RBP21.34■■□□□ 1.01
PNKP-221ENST00000627317 TECPR2O15040 1411 aa21.33■■□□□ 1.01
PNKP-221ENST00000627317 CADPS2Q86UW7 1296 aa21.33■■□□□ 1.01
PNKP-221ENST00000627317 MST1RQ04912 1400 aa21.32■■□□□ 1
PNKP-221ENST00000627317 C14orf37Q86TY3 774 aa21.32■■□□□ 1
PNKP-221ENST00000627317 SIN3AQ96ST3 1273 aa21.32■■□□□ 1
PNKP-221ENST00000627317 NEUROD1Q13562 356 aa21.31■■□□□ 1
PNKP-221ENST00000627317 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
PNKP-221ENST00000627317 AHDC1Q5TGY3 1603 aaPredicted RBP21.29■■□□□ 1
PNKP-221ENST00000627317 ATF3P18847 181 aa21.29■■□□□ 1
PNKP-221ENST00000627317 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
PNKP-221ENST00000627317 LRPPRCP42704 1394 aaKnown RBP21.28■■□□□ 1
PNKP-221ENST00000627317 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
PNKP-221ENST00000627317 LAMC1P11047 1609 aa21.26■□□□□ 0.99
PNKP-221ENST00000627317 ABCC11Q96J66 1382 aa21.26■□□□□ 0.99
PNKP-221ENST00000627317 PHLPP1O60346 1717 aa21.25■□□□□ 0.99
PNKP-221ENST00000627317 BRINP3Q76B58 766 aa21.25■□□□□ 0.99
PNKP-221ENST00000627317 C14orf93Q9H972 538 aaKnown RBP21.25■□□□□ 0.99
PNKP-221ENST00000627317 YTHDC2Q9H6S0 1430 aaKnown RBP21.24■□□□□ 0.99
PNKP-221ENST00000627317 ILDR2Q71H61 639 aa21.23■□□□□ 0.99
PNKP-221ENST00000627317 ADGRB1O14514 1584 aa21.23■□□□□ 0.99
PNKP-221ENST00000627317 CDC42BPGQ6DT37 1551 aa21.23■□□□□ 0.99
PNKP-221ENST00000627317 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
PNKP-221ENST00000627317 TMEM132EQ6IEE7 984 aa21.22■□□□□ 0.99
PNKP-221ENST00000627317 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
PNKP-221ENST00000627317 C1orf167Q5SNV9 1468 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms