RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 KIF1BO60333 1816 aa18.66■□□□□ 0.58
LINC00963-217ENST00000624009 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
LINC00963-217ENST00000624009 LRRC7Q96NW7 1537 aa18.62■□□□□ 0.57
LINC00963-217ENST00000624009 DIP2AQ14689 1571 aa18.62■□□□□ 0.57
LINC00963-217ENST00000624009 CHD2O14647 1828 aaKnown RBP18.61■□□□□ 0.57
LINC00963-217ENST00000624009 CLTCL1P53675 1640 aa18.61■□□□□ 0.57
LINC00963-217ENST00000624009 NWD1Q149M9 1564 aa18.61■□□□□ 0.57
LINC00963-217ENST00000624009 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
LINC00963-217ENST00000624009 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
LINC00963-217ENST00000624009 NKTRP30414 1462 aaKnown RBP18.59■□□□□ 0.57
LINC00963-217ENST00000624009 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
LINC00963-217ENST00000624009 KCNA6P17658 529 aa18.59■□□□□ 0.57
LINC00963-217ENST00000624009 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.57
LINC00963-217ENST00000624009 PIK3R4Q99570 1358 aa18.58■□□□□ 0.57
LINC00963-217ENST00000624009 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
LINC00963-217ENST00000624009 TBX22Q9Y458 520 aa18.58■□□□□ 0.56
LINC00963-217ENST00000624009 UBAP1LF5GYI3 381 aa18.57■□□□□ 0.56
LINC00963-217ENST00000624009 TOM1O60784 492 aa18.57■□□□□ 0.56
LINC00963-217ENST00000624009 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
LINC00963-217ENST00000624009 HRCP23327 699 aa18.55■□□□□ 0.56
LINC00963-217ENST00000624009 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
LINC00963-217ENST00000624009 SLC26A8Q96RN1 970 aa18.54■□□□□ 0.56
LINC00963-217ENST00000624009 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
LINC00963-217ENST00000624009 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
LINC00963-217ENST00000624009 RPGRIP1LQ68CZ1 1315 aa18.52■□□□□ 0.56
LINC00963-217ENST00000624009 ALKQ9UM73 1620 aa18.52■□□□□ 0.55
LINC00963-217ENST00000624009 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
LINC00963-217ENST00000624009 BCANQ96GW7 911 aa18.51■□□□□ 0.55
LINC00963-217ENST00000624009 NRXN3Q9Y4C0 1643 aa18.51■□□□□ 0.55
LINC00963-217ENST00000624009 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
LINC00963-217ENST00000624009 PPLO60437 1756 aa18.5■□□□□ 0.55
LINC00963-217ENST00000624009 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
LINC00963-217ENST00000624009 ZNF326Q5BKZ1 582 aaKnown RBP18.49■□□□□ 0.55
LINC00963-217ENST00000624009 TMEM94Q12767 1356 aa18.48■□□□□ 0.55
LINC00963-217ENST00000624009 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
LINC00963-217ENST00000624009 PROSER2Q86WR7 435 aaPredicted RBP18.45■□□□□ 0.54
LINC00963-217ENST00000624009 XRN1Q8IZH2 1706 aaKnown RBP18.44■□□□□ 0.54
LINC00963-217ENST00000624009 SPATA31E1Q6ZUB1 1445 aa18.44■□□□□ 0.54
LINC00963-217ENST00000624009 NUTM2DQ5VT03 806 aaPredicted RBP18.44■□□□□ 0.54
LINC00963-217ENST00000624009 IFT172Q9UG01 1749 aa18.43■□□□□ 0.54
LINC00963-217ENST00000624009 SETD1AO15047 1707 aaKnown RBP18.42■□□□□ 0.54
LINC00963-217ENST00000624009 MSH6P52701 1360 aa18.42■□□□□ 0.54
LINC00963-217ENST00000624009 FOXD1Q16676 465 aa18.41■□□□□ 0.54
LINC00963-217ENST00000624009 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
LINC00963-217ENST00000624009 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
LINC00963-217ENST00000624009 PRAG1Q86YV5 1406 aa18.4■□□□□ 0.54
LINC00963-217ENST00000624009 PTPRUQ92729 1446 aa18.39■□□□□ 0.53
LINC00963-217ENST00000624009 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
LINC00963-217ENST00000624009 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
LINC00963-217ENST00000624009 METP08581 1390 aa18.37■□□□□ 0.53
LINC00963-217ENST00000624009 DCCP43146 1447 aa18.37■□□□□ 0.53
LINC00963-217ENST00000624009 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
LINC00963-217ENST00000624009 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
LINC00963-217ENST00000624009 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
LINC00963-217ENST00000624009 C19orf44Q9H6X5 657 aa18.35■□□□□ 0.53
LINC00963-217ENST00000624009 HSPA1LP34931 641 aa18.34■□□□□ 0.53
LINC00963-217ENST00000624009 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
LINC00963-217ENST00000624009 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
LINC00963-217ENST00000624009 CADPS2Q86UW7 1296 aa18.32■□□□□ 0.52
LINC00963-217ENST00000624009 MYOM2P54296 1465 aa18.32■□□□□ 0.52
LINC00963-217ENST00000624009 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
LINC00963-217ENST00000624009 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
LINC00963-217ENST00000624009 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
LINC00963-217ENST00000624009 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
LINC00963-217ENST00000624009 LAMC1P11047 1609 aa18.3■□□□□ 0.52
LINC00963-217ENST00000624009 RGL3Q3MIN7 710 aa18.29■□□□□ 0.52
LINC00963-217ENST00000624009 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
LINC00963-217ENST00000624009 ADGRF5Q8IZF2 1346 aa18.28■□□□□ 0.52
LINC00963-217ENST00000624009 C14orf37Q86TY3 774 aa18.28■□□□□ 0.52
LINC00963-217ENST00000624009 TECPR2O15040 1411 aa18.28■□□□□ 0.52
LINC00963-217ENST00000624009 ADGRL3Q9HAR2 1447 aa18.28■□□□□ 0.52
LINC00963-217ENST00000624009 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.52
LINC00963-217ENST00000624009 ATF3P18847 181 aa18.27■□□□□ 0.52
LINC00963-217ENST00000624009 NALCNQ8IZF0 1738 aa18.26■□□□□ 0.51
LINC00963-217ENST00000624009 ABCC11Q96J66 1382 aa18.23■□□□□ 0.51
LINC00963-217ENST00000624009 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
LINC00963-217ENST00000624009 LRPPRCP42704 1394 aaKnown RBP18.22■□□□□ 0.51
LINC00963-217ENST00000624009 C14orf93Q9H972 538 aaKnown RBP18.22■□□□□ 0.51
LINC00963-217ENST00000624009 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
LINC00963-217ENST00000624009 PHLPP1O60346 1717 aa18.21■□□□□ 0.51
LINC00963-217ENST00000624009 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
LINC00963-217ENST00000624009 ASXL1Q8IXJ9 1541 aa18.21■□□□□ 0.51
LINC00963-217ENST00000624009 MST1RQ04912 1400 aa18.21■□□□□ 0.51
LINC00963-217ENST00000624009 MED1Q15648 1581 aaPredicted RBP18.21■□□□□ 0.51
LINC00963-217ENST00000624009 SIRT1Q96EB6 747 aa18.2■□□□□ 0.5
LINC00963-217ENST00000624009 CDC42BPGQ6DT37 1551 aa18.18■□□□□ 0.5
LINC00963-217ENST00000624009 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
LINC00963-217ENST00000624009 COL16A1Q07092 1604 aaPredicted RBP18.18■□□□□ 0.5
LINC00963-217ENST00000624009 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
LINC00963-217ENST00000624009 DHX57Q6P158 1386 aaKnown RBP18.16■□□□□ 0.5
LINC00963-217ENST00000624009 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
LINC00963-217ENST00000624009 ADGRB1O14514 1584 aa18.14■□□□□ 0.49
LINC00963-217ENST00000624009 BRINP3Q76B58 766 aa18.14■□□□□ 0.49
LINC00963-217ENST00000624009 JCADQ9P266 1359 aa18.14■□□□□ 0.49
LINC00963-217ENST00000624009 KIAA1210Q9ULL0 1709 aa18.13■□□□□ 0.49
LINC00963-217ENST00000624009 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
LINC00963-217ENST00000624009 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
LINC00963-217ENST00000624009 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
LINC00963-217ENST00000624009 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
LINC00963-217ENST00000624009 TMEM132EQ6IEE7 984 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms