RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
CDH23-214ENST00000622827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.51■□□□□ 0.39
CDH23-214ENST00000622827 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
CDH23-214ENST00000622827 CCDC9Q9Y3X0 531 aaKnown RBP17.51■□□□□ 0.39
CDH23-214ENST00000622827 MYO6Q9UM54 1294 aa17.51■□□□□ 0.39
CDH23-214ENST00000622827 SYNE3Q6ZMZ3 975 aa17.5■□□□□ 0.39
CDH23-214ENST00000622827 PLCD4Q9BRC7 762 aa17.5■□□□□ 0.39
CDH23-214ENST00000622827 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
CDH23-214ENST00000622827 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
CDH23-214ENST00000622827 EXOC6Q8TAG9 804 aa17.5■□□□□ 0.39
CDH23-214ENST00000622827 LRRFIP1Q32MZ4 808 aaKnown RBP17.5■□□□□ 0.39
CDH23-214ENST00000622827 TERF2IPQ9NYB0 399 aa17.49■□□□□ 0.39
CDH23-214ENST00000622827 NFKBIBQ15653 356 aa17.49■□□□□ 0.39
CDH23-214ENST00000622827 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
CDH23-214ENST00000622827 CCDC47Q96A33 483 aaKnown RBP17.49■□□□□ 0.39
CDH23-214ENST00000622827 CPLX1O14810 134 aa17.49■□□□□ 0.39
CDH23-214ENST00000622827 ZKSCAN2Q63HK3 967 aa17.49■□□□□ 0.39
CDH23-214ENST00000622827 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
CDH23-214ENST00000622827 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
CDH23-214ENST00000622827 CSB-PGBD3P0DP91 1061 aa17.48■□□□□ 0.39
CDH23-214ENST00000622827 CT47A1Q5JQC4 288 aaPredicted RBP17.48■□□□□ 0.39
CDH23-214ENST00000622827 CCP110O43303 1012 aa17.48■□□□□ 0.39
CDH23-214ENST00000622827 ROCK1Q13464 1354 aa17.47■□□□□ 0.39
CDH23-214ENST00000622827 CPLX2Q6PUV4 134 aaKnown RBP17.47■□□□□ 0.39
CDH23-214ENST00000622827 PDILTQ8N807 584 aa17.47■□□□□ 0.39
CDH23-214ENST00000622827 KIAA0754O94854 1291 aa17.47■□□□□ 0.39
CDH23-214ENST00000622827 TAF3Q5VWG9 929 aa17.47■□□□□ 0.39
CDH23-214ENST00000622827 FRAT2O75474 233 aaPredicted RBP17.47■□□□□ 0.39
CDH23-214ENST00000622827 E9PSI1 815 aa17.46■□□□□ 0.39
CDH23-214ENST00000622827 AXDND1Q5T1B0 1012 aaPredicted RBP17.46■□□□□ 0.39
CDH23-214ENST00000622827 CCDC173Q0VFZ6 552 aa17.46■□□□□ 0.39
CDH23-214ENST00000622827 OLFM4Q6UX06 510 aa17.46■□□□□ 0.39
CDH23-214ENST00000622827 EPS15P42566 896 aa17.46■□□□□ 0.39
CDH23-214ENST00000622827 RRP9O43818 475 aaKnown RBP17.45■□□□□ 0.38
CDH23-214ENST00000622827 NUP155O75694 1391 aa17.45■□□□□ 0.38
CDH23-214ENST00000622827 BCL2L13Q9BXK5 485 aa17.45■□□□□ 0.38
CDH23-214ENST00000622827 SMC3Q9UQE7 1217 aa17.45■□□□□ 0.38
CDH23-214ENST00000622827 RBM10P98175 930 aaKnown RBP17.44■□□□□ 0.38
CDH23-214ENST00000622827 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
CDH23-214ENST00000622827 FOSBP53539 338 aa17.44■□□□□ 0.38
CDH23-214ENST00000622827 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
CDH23-214ENST00000622827 TTLL5Q6EMB2 1281 aa17.43■□□□□ 0.38
CDH23-214ENST00000622827 TRIM5Q9C035 493 aa17.43■□□□□ 0.38
CDH23-214ENST00000622827 G3V3G9 751 aa17.43■□□□□ 0.38
CDH23-214ENST00000622827 ODF2Q5BJF6 829 aa17.43■□□□□ 0.38
CDH23-214ENST00000622827 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
CDH23-214ENST00000622827 MPHOSPH9Q99550 1183 aa17.43■□□□□ 0.38
CDH23-214ENST00000622827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDH23-214ENST00000622827 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
CDH23-214ENST00000622827 TSPY26PQ9H489 355 aa17.42■□□□□ 0.38
CDH23-214ENST00000622827 GOLGA6L10A6NI86 522 aa17.42■□□□□ 0.38
CDH23-214ENST00000622827 PRKCSHP14314 528 aaPredicted RBP17.41■□□□□ 0.38
CDH23-214ENST00000622827 CAVIN1Q6NZI2 390 aaKnown RBP17.41■□□□□ 0.38
CDH23-214ENST00000622827 DDX19BQ9UMR2 479 aa17.41■□□□□ 0.38
CDH23-214ENST00000622827 SMC2O95347 1197 aa17.41■□□□□ 0.38
CDH23-214ENST00000622827 CT47B1P0C2W7 299 aaPredicted RBP17.41■□□□□ 0.38
CDH23-214ENST00000622827 COG6Q9Y2V7 657 aa17.41■□□□□ 0.38
CDH23-214ENST00000622827 LETM1O95202 739 aaPredicted RBP17.41■□□□□ 0.38
CDH23-214ENST00000622827 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
CDH23-214ENST00000622827 INCENPQ9NQS7 918 aa17.4■□□□□ 0.38
CDH23-214ENST00000622827 ZRSR2Q15696 482 aaKnown RBP17.4■□□□□ 0.38
CDH23-214ENST00000622827 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
CDH23-214ENST00000622827 ANKRD30AQ9BXX3 1397 aa17.39■□□□□ 0.38
CDH23-214ENST00000622827 NFXL1Q6ZNB6 911 aa17.39■□□□□ 0.37
CDH23-214ENST00000622827 DEF6Q9H4E7 631 aa17.39■□□□□ 0.37
CDH23-214ENST00000622827 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
CDH23-214ENST00000622827 UQCRHLA0A096LP55 91 aa17.38■□□□□ 0.37
CDH23-214ENST00000622827 UQCRHP07919 91 aa17.38■□□□□ 0.37
CDH23-214ENST00000622827 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
CDH23-214ENST00000622827 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
CDH23-214ENST00000622827 GOLGA6L7A0A1B0GV03 622 aa17.38■□□□□ 0.37
CDH23-214ENST00000622827 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDH23-214ENST00000622827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDH23-214ENST00000622827 CUX2O14529 1486 aa17.37■□□□□ 0.37
CDH23-214ENST00000622827 TRAK2O60296 914 aa17.37■□□□□ 0.37
CDH23-214ENST00000622827 MBD3O95983 291 aa17.37■□□□□ 0.37
CDH23-214ENST00000622827 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
CDH23-214ENST00000622827 OFD1O75665 1012 aa17.36■□□□□ 0.37
CDH23-214ENST00000622827 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDH23-214ENST00000622827 TRDNQ13061 729 aa17.36■□□□□ 0.37
CDH23-214ENST00000622827 SKIDA1Q1XH10 827 aa17.36■□□□□ 0.37
CDH23-214ENST00000622827 AMOTL1Q8IY63 956 aa17.36■□□□□ 0.37
CDH23-214ENST00000622827 NACADO15069 1562 aa17.36■□□□□ 0.37
CDH23-214ENST00000622827 USP8P40818 1118 aa17.36■□□□□ 0.37
CDH23-214ENST00000622827 CCDC43Q96MW1 224 aaKnown RBP17.36■□□□□ 0.37
CDH23-214ENST00000622827 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
CDH23-214ENST00000622827 KINO60870 393 aaKnown RBP17.36■□□□□ 0.37
CDH23-214ENST00000622827 C9orf78Q9NZ63 289 aaPredicted RBP17.36■□□□□ 0.37
CDH23-214ENST00000622827 DYDC1Q8WWB3 177 aa17.35■□□□□ 0.37
CDH23-214ENST00000622827 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.35■□□□□ 0.37
CDH23-214ENST00000622827 USP47Q96K76 1375 aa17.35■□□□□ 0.37
CDH23-214ENST00000622827 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
CDH23-214ENST00000622827 SOGA1O94964 1423 aa17.35■□□□□ 0.37
CDH23-214ENST00000622827 NOL10Q9BSC4 688 aaKnown RBP17.34■□□□□ 0.37
CDH23-214ENST00000622827 SDF4Q9BRK5 362 aa17.34■□□□□ 0.37
CDH23-214ENST00000622827 ERLIN2O94905 339 aa17.34■□□□□ 0.37
CDH23-214ENST00000622827 TRIM34Q9BYJ4 488 aa17.33■□□□□ 0.37
CDH23-214ENST00000622827 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.37
CDH23-214ENST00000622827 ERICH4A6NGS2 130 aa17.33■□□□□ 0.36
CDH23-214ENST00000622827 AMPHP49418 695 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms